Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10855

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,448,320	+		DDA3937_RS10850	0.85	+0.2
2,448,321	-		DDA3937_RS10850	0.85	+0.2
2,448,321	-		DDA3937_RS10850	0.85	-0.5
2,448,323	+		DDA3937_RS10850	0.85	+0.2
2,448,540	-				-1.1
2,448,547	-				-0.8
2,448,547	-				-0.7
2,448,547	-				+0.3
2,448,547	-				-1.3
2,448,549	+				-0.8
2,448,549	+				-1.7
2,448,549	+				-0.4
2,448,549	+				+1.2
2,448,549	+				+0.3
2,448,550	-				-0.7
2,448,550	-				-1.3
2,448,550	-				-1.1
2,448,550	-				-1.1
2,448,550	-				-1.8
2,448,555	+				-1.4
2,448,555	+				-0.5
2,448,555	+				-0.8
2,448,555	+				-0.1
2,448,555	+				-0.2
2,448,555	+				-0.4
2,448,555	+				-1.0
2,448,555	+				-1.0
2,448,556	-				-0.9
2,448,556	-				+0.3
2,448,556	-				-1.5
2,448,556	-				-0.3
2,448,556	-				-1.1
2,448,705	-				+0.7
2,448,749	-				+0.1
2,448,749	-				-0.2
2,448,790	+				-0.5
2,448,791	-				-0.1
2,448,791	-				+0.2
2,448,831	-				-1.7
2,448,836	+				-0.7
2,448,868	+				+0.1
2,448,876	-				+0.2
2,448,876	-				-0.7
2,448,881	+				-2.1
2,448,881	+				-0.4
2,448,882	-				-0.1
2,448,914	+				-0.1
2,448,923	-				-0.1
2,448,934	+				+1.2
2,448,941	+				-0.5
2,449,050	-				+0.4
2,449,132	-				-1.1
2,449,164	+				-1.1
2,449,166	+				+0.1
2,449,166	+				-0.8
2,449,166	+				+0.7
2,449,167	-				+0.4
2,449,167	-				-0.7
2,449,167	-				+0.6
2,449,167	-				+0.3
2,449,189	-				-0.1
2,449,189	-				+0.3
2,449,265	+				+0.3
2,449,265	+				-1.7
2,449,279	+				-1.7
2,449,280	-				+0.2
2,449,280	-				-0.2
2,449,280	-				-1.5
2,449,280	-				-0.2
2,449,280	-				+0.1
2,449,324	-		DDA3937_RS10855	0.11	-0.6
2,449,386	-		DDA3937_RS10855	0.25	+0.4
2,449,545	+		DDA3937_RS10855	0.59	-1.6
2,449,595	+				-0.3
2,449,596	-		DDA3937_RS10855	0.71	+0.0
2,449,879	+				-0.6
2,449,880	-				-0.8
2,449,896	+				-0.1
2,449,896	+				-1.2
2,449,897	-				+1.2
2,449,897	-				+0.3
2,449,897	-				-0.1
2,450,027	-		DDA3937_RS10860	0.16	-0.4
2,450,065	+		DDA3937_RS10860	0.18	+0.1
2,450,065	+		DDA3937_RS10860	0.18	+0.1
2,450,182	+		DDA3937_RS10860	0.25	-1.5
2,450,182	+		DDA3937_RS10860	0.25	+0.5
2,450,182	+		DDA3937_RS10860	0.25	-0.2
2,450,243	+		DDA3937_RS10860	0.28	-0.7
2,450,244	-				+0.2
2,450,257	+		DDA3937_RS10860	0.29	+0.6
2,450,258	-		DDA3937_RS10860	0.29	+0.1
2,450,284	+		DDA3937_RS10860	0.30	-1.3
2,450,284	+		DDA3937_RS10860	0.30	-1.1
2,450,284	+		DDA3937_RS10860	0.30	-0.1
2,450,284	+		DDA3937_RS10860	0.30	-0.5
2,450,284	+		DDA3937_RS10860	0.30	-1.1
2,450,284	+		DDA3937_RS10860	0.30	+0.1
2,450,284	+		DDA3937_RS10860	0.30	+0.9
2,450,284	+		DDA3937_RS10860	0.30	-1.3
2,450,284	+		DDA3937_RS10860	0.30	+1.2
2,450,285	-		DDA3937_RS10860	0.30	+0.7
2,450,285	-		DDA3937_RS10860	0.30	+0.0
2,450,285	-		DDA3937_RS10860	0.30	-1.7
2,450,285	-		DDA3937_RS10860	0.30	-0.9
2,450,285	-		DDA3937_RS10860	0.30	-2.1
2,450,455	+		DDA3937_RS10860	0.40	-0.1
2,450,511	+		DDA3937_RS10860	0.43	+0.2
2,450,511	+		DDA3937_RS10860	0.43	+1.0
2,450,512	-		DDA3937_RS10860	0.43	+0.3
2,450,512	-				-0.1
2,450,512	-		DDA3937_RS10860	0.43	-0.1
2,450,512	-		DDA3937_RS10860	0.43	-0.6
2,450,512	-		DDA3937_RS10860	0.43	-0.5
2,450,515	+		DDA3937_RS10860	0.43	-1.7
2,450,515	+		DDA3937_RS10860	0.43	-0.6
2,450,515	+		DDA3937_RS10860	0.43	+0.2
2,450,515	+		DDA3937_RS10860	0.43	+0.1
2,450,516	-		DDA3937_RS10860	0.43	+0.7
2,450,516	-		DDA3937_RS10860	0.43	+0.2
2,450,516	-		DDA3937_RS10860	0.43	-1.2
2,450,607	+		DDA3937_RS10860	0.48	-1.1
2,450,613	-		DDA3937_RS10860	0.48	-0.2
2,450,674	+				+0.5
2,450,674	+				-0.7
2,450,674	+		DDA3937_RS10860	0.52	-0.1
2,450,674	+		DDA3937_RS10860	0.52	-0.5
2,450,674	+		DDA3937_RS10860	0.52	-0.1
2,450,675	-		DDA3937_RS10860	0.52	+1.5
2,450,675	-		DDA3937_RS10860	0.52	-0.1
2,450,675	-		DDA3937_RS10860	0.52	-0.5
2,450,675	-		DDA3937_RS10860	0.52	-0.2
2,450,675	-		DDA3937_RS10860	0.52	+0.6
2,450,675	-		DDA3937_RS10860	0.52	-0.2
2,450,675	-		DDA3937_RS10860	0.52	+0.4
2,450,675	-		DDA3937_RS10860	0.52	-0.9
2,450,675	-		DDA3937_RS10860	0.52	-0.1
2,450,675	-		DDA3937_RS10860	0.52	+0.7
2,450,709	+		DDA3937_RS10860	0.53	-0.1
2,450,710	-		DDA3937_RS10860	0.54	-1.5
2,450,728	+		DDA3937_RS10860	0.54	-0.3
2,450,728	+		DDA3937_RS10860	0.54	-0.2
2,450,729	-		DDA3937_RS10860	0.55	-1.7
2,450,729	-		DDA3937_RS10860	0.55	+0.6
2,450,729	-		DDA3937_RS10860	0.55	-0.0
2,450,729	-		DDA3937_RS10860	0.55	-1.0