Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10825

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,437,408	+		DDA3937_RS10820	0.49	-0.8
2,437,408	+		DDA3937_RS10820	0.49	-0.9
2,437,409	-		DDA3937_RS10820	0.50	+0.4
2,437,541	+		DDA3937_RS10820	0.57	+0.9
2,437,541	+		DDA3937_RS10820	0.57	-0.7
2,437,542	-		DDA3937_RS10820	0.57	-0.4
2,437,542	-		DDA3937_RS10820	0.57	+0.8
2,437,600	-		DDA3937_RS10820	0.61	+1.3
2,438,011	-		DDA3937_RS10820	0.84	+0.4
2,438,029	+		DDA3937_RS10820	0.85	-1.7
2,438,041	-		DDA3937_RS10820	0.86	-0.6
2,438,141	+				+0.5
2,438,141	+				-1.1
2,438,141	+				-1.3
2,438,141	+				-0.8
2,438,141	+				-0.1
2,438,142	-				+0.3
2,438,142	-				+0.5
2,438,154	+				-0.1
2,438,154	+				+0.4
2,438,154	+				+0.5
2,438,154	+				+0.5
2,438,154	+				-0.8
2,438,154	+				+1.1
2,438,155	-				-0.1
2,438,155	-				+0.9
2,438,155	-				-0.3
2,438,155	-				-0.0
2,438,155	-				+0.1
2,438,155	-				-1.2
2,438,155	-				-0.1
2,438,155	-				-0.3
2,438,155	-				-1.6
2,438,155	-				-0.2
2,438,155	-				-0.1
2,438,156	+				+0.6
2,438,156	+				-0.7
2,438,156	+				-0.1
2,438,156	+				+0.4
2,438,156	+				-0.6
2,438,156	+				-1.5
2,438,156	+				+0.1
2,438,156	+				-0.6
2,438,156	+				-0.2
2,438,156	+				+0.6
2,438,156	+				-0.8
2,438,156	+				-0.4
2,438,156	+				+0.1
2,438,156	+				+0.7
2,438,157	-				+1.1
2,438,157	-				+0.1
2,438,157	-				-0.6
2,438,157	-				+0.2
2,438,157	-				+1.4
2,438,157	-				+0.2
2,438,157	-				+0.4
2,438,157	-				-1.0
2,438,157	-				+0.1
2,438,157	-				-0.8
2,438,158	+				+0.8
2,438,158	+				-0.1
2,438,158	+				-0.1
2,438,159	-				+0.0
2,438,159	-				-0.5
2,438,159	-				+0.3
2,438,159	-				+1.5
2,438,299	-				-0.4
2,438,341	+		DDA3937_RS10825	0.12	+0.7
2,438,341	+		DDA3937_RS10825	0.12	-1.7
2,438,341	+		DDA3937_RS10825	0.12	+0.4
2,438,341	+		DDA3937_RS10825	0.12	-0.2
2,438,341	+		DDA3937_RS10825	0.12	-0.1
2,438,341	+		DDA3937_RS10825	0.12	-2.7
2,438,341	+		DDA3937_RS10825	0.12	-0.8
2,438,341	+		DDA3937_RS10825	0.12	-0.3
2,438,341	+		DDA3937_RS10825	0.12	+0.9
2,438,341	+		DDA3937_RS10825	0.12	+0.0
2,438,341	+		DDA3937_RS10825	0.12	-0.6
2,438,341	+		DDA3937_RS10825	0.12	+0.3
2,438,342	-		DDA3937_RS10825	0.12	+0.5
2,438,342	-		DDA3937_RS10825	0.12	+0.5
2,438,342	-		DDA3937_RS10825	0.12	+0.5
2,438,608	+		DDA3937_RS10825	0.86	-0.1
2,438,608	+		DDA3937_RS10825	0.86	+1.2
2,438,608	+		DDA3937_RS10825	0.86	+0.7
2,438,608	+		DDA3937_RS10825	0.86	-2.1
2,438,609	-		DDA3937_RS10825	0.86	+0.5
2,438,609	-		DDA3937_RS10825	0.86	-0.0
2,438,633	+				+0.4
2,438,633	+				-0.3
2,438,633	+				-0.5
2,438,644	+				-1.1
2,438,644	+				+0.6
2,438,647	+				-0.0
2,438,662	+				-0.7
2,438,695	+				-0.1
2,438,696	-				+1.9
2,438,696	-				-0.7
2,438,698	+				+0.2
2,438,698	+				+0.7
2,438,720	+				+0.9
2,438,720	+				+0.8
2,438,721	-				+0.3
2,438,721	-				+0.2
2,438,721	-				+0.1
2,438,721	-				+1.3
2,438,721	-				+0.1
2,438,738	+				+0.4
2,438,739	-				-0.5
2,438,740	+				-0.1
2,438,740	+				+0.6
2,438,901	-				+1.5
2,438,922	-				+0.3
2,439,120	-		DDA3937_RS10830	0.22	+0.2
2,439,139	+				+0.5
2,439,140	-		DDA3937_RS10830	0.23	+0.7
2,439,170	+		DDA3937_RS10830	0.25	-0.7
2,439,176	+		DDA3937_RS10830	0.25	-1.1
2,439,177	-		DDA3937_RS10830	0.26	-3.3
2,439,296	+		DDA3937_RS10830	0.34	+0.8
2,439,305	+		DDA3937_RS10830	0.34	+0.3
2,439,308	+		DDA3937_RS10830	0.35	+0.3
2,439,309	-		DDA3937_RS10830	0.35	-0.4
2,439,345	-		DDA3937_RS10830	0.37	-0.1
2,439,345	-		DDA3937_RS10830	0.37	-0.1
2,439,406	+		DDA3937_RS10830	0.41	-0.5
2,439,406	+		DDA3937_RS10830	0.41	-0.3
2,439,407	-		DDA3937_RS10830	0.42	-1.3
2,439,442	-		DDA3937_RS10830	0.44	-0.5
2,439,442	-		DDA3937_RS10830	0.44	+0.2
2,439,467	+		DDA3937_RS10830	0.46	+0.7
2,439,479	-		DDA3937_RS10830	0.47	-0.7
2,439,479	-		DDA3937_RS10830	0.47	-0.1
2,439,500	+		DDA3937_RS10830	0.48	-1.5
2,439,501	-		DDA3937_RS10830	0.48	+0.1
2,439,501	-		DDA3937_RS10830	0.48	+0.8
2,439,529	+		DDA3937_RS10830	0.50	+1.3
2,439,529	+		DDA3937_RS10830	0.50	-0.8
2,439,575	+		DDA3937_RS10830	0.53	+0.1
2,439,575	+		DDA3937_RS10830	0.53	-1.5
2,439,578	+		DDA3937_RS10830	0.53	-0.3
2,439,604	+		DDA3937_RS10830	0.55	-0.4
2,439,617	+		DDA3937_RS10830	0.56	-0.9
2,439,617	+		DDA3937_RS10830	0.56	+0.7
2,439,618	-		DDA3937_RS10830	0.56	-0.1
2,439,646	+		DDA3937_RS10830	0.58	-0.1