Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10655

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,398,037	-		DDA3937_RS10650	0.35	+1.2
2,398,057	+		DDA3937_RS10650	0.37	-0.9
2,398,136	-		DDA3937_RS10650	0.43	+0.3
2,398,148	+		DDA3937_RS10650	0.44	+0.3
2,398,381	+		DDA3937_RS10650	0.64	-0.2
2,398,429	+		DDA3937_RS10650	0.68	+0.2
2,398,430	-		DDA3937_RS10650	0.68	-0.2
2,398,430	-		DDA3937_RS10650	0.68	-0.1
2,398,430	-				-1.1
2,398,616	+		DDA3937_RS10650	0.84	+0.0
2,398,616	+		DDA3937_RS10650	0.84	+0.9
2,398,738	+				+1.2
2,398,738	+				-0.1
2,398,761	-				-0.1
2,398,774	+				+0.1
2,398,806	-				-0.5
2,398,808	+				+0.1
2,398,822	+				+0.5
2,398,834	+				+1.1
2,398,835	-				-0.3
2,398,888	+				-1.5
2,398,888	+				-0.1
2,398,889	-				+0.4
2,398,889	-				-0.1
2,398,903	+				-0.3
2,398,911	+				+0.6
2,398,911	+				-0.5
2,398,911	+				+0.9
2,398,912	-				-0.4
2,398,912	-				+0.2
2,398,912	-				+0.9
2,398,912	-				+0.8
2,398,912	-				-0.1
2,398,912	-				+0.2
2,398,912	-				-1.3
2,398,912	-				+1.4
2,398,912	-				-2.0
2,398,913	+				-0.1
2,398,913	+				-0.5
2,398,913	+				+0.4
2,398,914	-				+1.3
2,398,914	-				-1.5
2,398,914	-				+0.1
2,398,914	-				-0.2
2,398,914	-				+0.4
2,398,914	-				+1.3
2,398,914	-				-0.3
2,398,914	-				-0.6
2,398,914	-				+0.4
2,398,914	-				+0.1
2,398,952	+				+0.2
2,398,969	-				+0.5
2,399,160	-		DDA3937_RS10655	0.13	+0.2
2,399,292	-		DDA3937_RS10655	0.22	-0.1
2,399,292	-		DDA3937_RS10655	0.22	+0.6
2,399,297	+		DDA3937_RS10655	0.22	-1.0
2,399,297	+		DDA3937_RS10655	0.22	-0.6
2,399,298	-		DDA3937_RS10655	0.23	-1.7
2,399,298	-		DDA3937_RS10655	0.23	+0.2
2,399,298	-		DDA3937_RS10655	0.23	-2.1
2,399,402	+		DDA3937_RS10655	0.30	-1.7
2,399,403	-		DDA3937_RS10655	0.30	-0.9
2,399,534	-		DDA3937_RS10655	0.39	-2.9
2,399,534	-		DDA3937_RS10655	0.39	-1.5
2,399,534	-		DDA3937_RS10655	0.39	+0.9
2,399,707	-				-0.1
2,399,897	+		DDA3937_RS10655	0.65	-1.1
2,399,898	-		DDA3937_RS10655	0.65	-1.7
2,400,120	-		DDA3937_RS10655	0.81	-0.1
2,400,173	+		DDA3937_RS10655	0.85	-0.4
2,400,174	-		DDA3937_RS10655	0.85	-0.3
2,400,387	+				-0.5
2,400,387	+				-0.1
2,400,387	+				-0.8
2,400,387	+				+0.1
2,400,403	+				-1.1
2,400,404	-				-2.9
2,400,404	-				+0.3
2,400,411	+				-1.1
2,400,412	-				-0.5
2,400,426	+				-1.3
2,400,481	+				+1.9
2,400,482	-		DDA3937_RS10660	0.11	+0.5
2,400,502	-		DDA3937_RS10660	0.13	+1.1
2,400,535	-		DDA3937_RS10660	0.16	-0.7
2,400,554	-		DDA3937_RS10660	0.18	-1.4
2,400,596	+		DDA3937_RS10660	0.23	-0.1
2,400,654	+		DDA3937_RS10660	0.29	-0.2
2,400,654	+		DDA3937_RS10660	0.29	-2.4
2,400,655	-		DDA3937_RS10660	0.29	+2.2
2,400,655	-		DDA3937_RS10660	0.29	-0.1
2,400,655	-		DDA3937_RS10660	0.29	-0.7
2,400,655	-		DDA3937_RS10660	0.29	-2.1
2,400,664	-		DDA3937_RS10660	0.30	-1.6
2,400,704	-		DDA3937_RS10660	0.35	+0.5
2,400,845	-		DDA3937_RS10660	0.50	+2.0
2,400,871	-		DDA3937_RS10660	0.53	-0.7
2,400,878	+		DDA3937_RS10660	0.53	-0.1
2,400,878	+		DDA3937_RS10660	0.53	-0.6
2,400,879	-		DDA3937_RS10660	0.53	+0.3
2,400,879	-		DDA3937_RS10660	0.53	+0.5
2,400,879	-		DDA3937_RS10660	0.53	-0.0
2,400,926	+		DDA3937_RS10660	0.58	+0.4
2,400,927	-		DDA3937_RS10660	0.59	-2.1
2,400,927	-		DDA3937_RS10660	0.59	-0.2
2,400,972	+		DDA3937_RS10660	0.63	+0.1
2,400,973	-		DDA3937_RS10660	0.64	+0.3
2,400,991	+		DDA3937_RS10660	0.65	-0.6
2,401,020	+		DDA3937_RS10660	0.69	+0.9
2,401,021	-		DDA3937_RS10660	0.69	+0.1
2,401,076	+		DDA3937_RS10660	0.75	-0.6
2,401,077	-		DDA3937_RS10660	0.75	+0.7
2,401,199	+		DDA3937_RS10660	0.88	+0.2
2,401,200	-		DDA3937_RS10660	0.88	+0.1
2,401,300	+				-0.8
2,401,300	+				-0.4
2,401,301	-				+1.7
2,401,311	+				+1.1
2,401,311	+				-1.2
2,401,311	+				-2.4
2,401,312	-				-1.2
2,401,350	+				+0.2
2,401,350	+				+0.0
2,401,351	-				+0.0
2,401,361	-				-0.4
2,401,373	+				-0.7
2,401,374	-				-0.4
2,401,374	-				-0.7
2,401,374	-				+1.3