Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10565

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,376,233	+				+0.5
2,376,233	+				+0.7
2,376,233	+				+0.6
2,376,514	-		DDA3937_RS10560	0.36	+1.3
2,376,571	+				+0.3
2,376,571	+		DDA3937_RS10560	0.42	+0.3
2,376,572	-		DDA3937_RS10560	0.42	-0.1
2,376,572	-		DDA3937_RS10560	0.42	+1.3
2,376,572	-		DDA3937_RS10560	0.42	-1.1
2,376,625	-		DDA3937_RS10560	0.47	+1.3
2,376,801	-		DDA3937_RS10560	0.64	+1.6
2,376,801	-		DDA3937_RS10560	0.64	-0.3
2,376,845	+		DDA3937_RS10560	0.68	+0.4
2,376,846	-		DDA3937_RS10560	0.68	+0.5
2,376,864	+		DDA3937_RS10560	0.70	-0.4
2,376,865	-		DDA3937_RS10560	0.70	+1.1
2,376,884	-		DDA3937_RS10560	0.72	+0.1
2,376,886	+		DDA3937_RS10560	0.72	-0.9
2,376,887	-		DDA3937_RS10560	0.72	-0.2
2,377,185	-				-0.1
2,377,218	+				+0.2
2,377,219	-				-0.1
2,377,945	+		DDA3937_RS10565	0.34	-1.1
2,377,946	-		DDA3937_RS10565	0.34	-1.2
2,378,039	-		DDA3937_RS10565	0.39	+0.6
2,378,094	-		DDA3937_RS10565	0.41	+3.1
2,378,097	-		DDA3937_RS10565	0.41	-1.1
2,378,113	-		DDA3937_RS10565	0.42	+0.1
2,378,129	+		DDA3937_RS10565	0.43	+0.6
2,378,322	+		DDA3937_RS10565	0.51	+0.2
2,378,323	-				-1.7
2,378,323	-		DDA3937_RS10565	0.51	+0.7
2,378,328	+		DDA3937_RS10565	0.52	+0.9
2,378,329	-		DDA3937_RS10565	0.52	+0.4
2,378,347	+		DDA3937_RS10565	0.52	-0.2
2,378,347	+		DDA3937_RS10565	0.52	+0.9
2,378,391	+		DDA3937_RS10565	0.54	-0.7
2,378,391	+		DDA3937_RS10565	0.54	+1.5
2,378,712	-		DDA3937_RS10565	0.69	+0.2
2,378,778	+				-0.7
2,378,779	-				-0.5
2,378,779	-		DDA3937_RS10565	0.72	+0.5
2,378,871	-				-0.7
2,378,871	-		DDA3937_RS10565	0.76	+0.1
2,378,871	-		DDA3937_RS10565	0.76	+0.9
2,378,871	-		DDA3937_RS10565	0.76	+1.3
2,378,871	-		DDA3937_RS10565	0.76	-0.1
2,378,895	+		DDA3937_RS10565	0.77	+1.5
2,378,998	+		DDA3937_RS10565	0.82	+1.8
2,379,072	+		DDA3937_RS10565	0.85	+1.1
2,379,075	+		DDA3937_RS10565	0.85	+0.7
2,379,076	-				-1.1
2,379,076	-		DDA3937_RS10565	0.85	-0.2
2,379,117	+		DDA3937_RS10565	0.87	-1.3
2,379,117	+		DDA3937_RS10565	0.87	+0.4
2,379,118	-				-0.4
2,379,209	-				+0.2
2,379,279	-				-1.9
2,379,279	-				-1.7
2,379,289	-				+0.5
2,379,397	-				+0.1
2,379,397	-				-0.7
2,379,397	-				+0.3
2,379,498	-		DDA3937_RS10570	0.17	+0.6
2,379,505	+		DDA3937_RS10570	0.19	+0.9
2,379,568	+		DDA3937_RS10570	0.29	+0.5
2,379,569	-		DDA3937_RS10570	0.29	+0.8
2,379,569	-				-1.7
2,379,569	-		DDA3937_RS10570	0.29	+0.9
2,379,572	+		DDA3937_RS10570	0.30	+0.4
2,379,573	-		DDA3937_RS10570	0.30	-0.3
2,379,573	-		DDA3937_RS10570	0.30	+0.2
2,379,573	-		DDA3937_RS10570	0.30	+0.8
2,379,736	+		DDA3937_RS10570	0.58	+0.9
2,379,736	+		DDA3937_RS10570	0.58	+1.1
2,379,736	+		DDA3937_RS10570	0.58	-0.1
2,379,737	-		DDA3937_RS10570	0.58	+0.1
2,379,737	-		DDA3937_RS10570	0.58	+0.8
2,379,979	+				+0.6
2,379,980	-				+0.1
2,379,980	-				-0.4
2,380,014	+				+0.3
2,380,126	+				+0.3
2,380,160	+		DDA3937_RS10575	0.30	+0.6
2,380,160	+		DDA3937_RS10575	0.30	-0.3
2,380,160	+		DDA3937_RS10575	0.30	+1.1
2,380,160	+		DDA3937_RS10575	0.30	-0.5
2,380,161	-		DDA3937_RS10575	0.30	+1.2
2,380,161	-		DDA3937_RS10575	0.30	-1.2
2,380,201	-		DDA3937_RS10575	0.37	-1.4
2,380,201	-		DDA3937_RS10575	0.37	-0.5
2,380,382	+		DDA3937_RS10575	0.68	+0.8
2,380,382	+		DDA3937_RS10575	0.68	-2.7
2,380,382	+				+0.9
2,380,382	+		DDA3937_RS10575	0.68	+1.2
2,380,383	-		DDA3937_RS10575	0.68	-0.6
2,380,383	-		DDA3937_RS10575	0.68	-1.4
2,380,383	-		DDA3937_RS10575	0.68	-0.2
2,380,383	-		DDA3937_RS10575	0.68	-0.2