Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10445

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,351,688	+		DDA3937_RS10440	0.42	-2.7
2,351,693	-		DDA3937_RS10440	0.42	+0.4
2,351,845	+		DDA3937_RS10440	0.63	+0.8
2,351,977	+		DDA3937_RS10440	0.80	-2.0
2,351,977	+		DDA3937_RS10440	0.80	-0.7
2,351,978	-		DDA3937_RS10440	0.80	-0.3
2,351,978	-		DDA3937_RS10440	0.80	-0.3
2,352,003	+		DDA3937_RS10440	0.84	-0.6
2,352,004	-		DDA3937_RS10440	0.84	+0.5
2,352,004	-		DDA3937_RS10440	0.84	-0.1
2,352,101	+				+0.4
2,352,103	+				-0.6
2,352,104	-				-0.3
2,352,104	-				-0.4
2,352,154	-				-0.3
2,352,162	+				-0.7
2,352,163	-				-0.5
2,352,389	-		DDA3937_RS22220	0.40	-0.8
2,352,445	+				+0.5
2,352,446	-		DDA3937_RS22220	0.55	-0.7
2,352,540	+		DDA3937_RS22220	0.81	-1.1
2,352,540	+		DDA3937_RS22220	0.81	+0.5
2,352,607	+				-0.1
2,352,607	+				-0.1
2,352,607	+				-1.9
2,352,607	+				-0.2
2,352,608	-				+0.6
2,352,662	+		DDA3937_RS10445	0.17	-3.1
2,352,699	-		DDA3937_RS10445	0.36	-1.6
2,352,757	-		DDA3937_RS10445	0.65	-0.6
2,352,787	+		DDA3937_RS10445	0.80	-0.1
2,352,788	-		DDA3937_RS10445	0.80	-1.5
2,352,788	-		DDA3937_RS10445	0.80	+0.1
2,352,843	-				-0.2
2,352,851	+				-0.7
2,352,852	-				-0.3
2,353,044	+		DDA3937_RS10450	0.24	+0.3
2,353,044	+		DDA3937_RS10450	0.24	-0.5
2,353,044	+		DDA3937_RS10450	0.24	-0.1
2,353,044	+		DDA3937_RS10450	0.24	-0.1
2,353,045	-		DDA3937_RS10450	0.24	-0.5
2,353,048	+		DDA3937_RS10450	0.25	-2.4
2,353,048	+		DDA3937_RS10450	0.25	+0.0
2,353,048	+		DDA3937_RS10450	0.25	+0.2
2,353,049	-		DDA3937_RS10450	0.25	-0.7
2,353,049	-		DDA3937_RS10450	0.25	-0.9
2,353,054	+		DDA3937_RS10450	0.26	-1.6
2,353,079	+		DDA3937_RS10450	0.30	-0.6
2,353,080	-		DDA3937_RS10450	0.30	+0.7
2,353,080	-		DDA3937_RS10450	0.30	+0.1
2,353,080	-		DDA3937_RS10450	0.30	-0.8
2,353,080	-		DDA3937_RS10450	0.30	+1.4
2,353,150	+		DDA3937_RS10450	0.41	-0.9
2,353,151	-		DDA3937_RS10450	0.41	-0.5
2,353,151	-		DDA3937_RS10450	0.41	-0.3
2,353,209	-		DDA3937_RS10450	0.50	-0.6
2,353,209	-		DDA3937_RS10450	0.50	+0.2
2,353,209	-		DDA3937_RS10450	0.50	-0.3
2,353,209	-		DDA3937_RS10450	0.50	+0.0
2,353,242	-		DDA3937_RS10450	0.56	-0.2
2,353,262	+		DDA3937_RS10450	0.59	-2.1
2,353,262	+		DDA3937_RS10450	0.59	-0.3
2,353,263	-		DDA3937_RS10450	0.59	-3.4
2,353,371	-		DDA3937_RS10450	0.76	-0.8
2,353,399	+		DDA3937_RS10450	0.80	-0.6
2,353,399	+		DDA3937_RS10450	0.80	-0.4
2,353,400	-		DDA3937_RS10450	0.81	-3.1
2,353,400	-		DDA3937_RS10450	0.81	+0.5
2,353,430	-		DDA3937_RS10450	0.85	-0.6
2,353,492	-				-0.5
2,353,495	+				+3.2
2,353,495	+				+0.8
2,353,496	-				-0.4
2,353,496	-				-0.8
2,353,496	-				-0.1
2,353,612	+				-0.2
2,353,612	+				+0.6
2,353,612	+				+1.4
2,353,612	+				+0.2
2,353,617	+				+0.2
2,353,617	+				+0.7
2,353,689	-		DDA3937_RS10455	0.12	-0.2
2,353,691	-		DDA3937_RS10455	0.12	+0.6
2,353,691	-		DDA3937_RS10455	0.12	+0.8
2,353,718	-		DDA3937_RS10455	0.16	-0.2
2,353,767	-		DDA3937_RS10455	0.23	-0.3
2,353,787	+		DDA3937_RS10455	0.25	+0.6
2,353,801	+		DDA3937_RS10455	0.27	+0.8
2,353,813	+		DDA3937_RS10455	0.29	+0.2