Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09525

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,142,862	+		DDA3937_RS09515	0.63	+2.3
2,142,862	+		DDA3937_RS09515	0.63	-0.1
2,142,863	-		DDA3937_RS09515	0.63	-0.1
2,142,906	-		DDA3937_RS09515	0.69	-0.4
2,142,906	-		DDA3937_RS09515	0.69	-0.2
2,142,942	-				-0.6
2,143,099	+				+0.9
2,143,100	-				+0.1
2,143,110	-				+0.4
2,143,110	-				-2.4
2,143,110	-				+0.8
2,143,110	-				-0.5
2,143,170	+				+0.9
2,143,185	-				+0.5
2,143,185	-				-0.3
2,143,189	-				-1.9
2,143,220	-				-0.3
2,143,228	+				-0.8
2,143,228	+				-0.1
2,143,228	+				-0.3
2,143,229	-				-0.4
2,143,229	-				+0.8
2,143,229	-				+0.1
2,143,229	-				-0.4
2,143,237	+				-0.2
2,143,323	+				-1.1
2,143,323	+				-1.2
2,143,409	+				+0.8
2,143,409	+				+0.5
2,143,409	+				-0.2
2,143,409	+				+0.2
2,143,410	-				-0.6
2,143,415	+				-0.8
2,143,415	+				-0.1
2,143,415	+				-1.1
2,143,415	+				+0.3
2,143,415	+				+0.0
2,143,416	-				+0.2
2,143,416	-				-0.8
2,143,416	-				+0.5
2,143,416	-				-1.1
2,143,418	-				-0.2
2,143,418	-				-0.3
2,143,428	+				+0.5
2,143,428	+				-1.1
2,143,428	+				-0.3
2,143,428	+				-0.2
2,143,428	+				-1.6
2,143,429	-				+0.4
2,143,429	-				-1.2
2,143,429	-				-0.9
2,143,429	-				-1.1
2,143,429	-				+1.5
2,143,429	-				-0.7
2,143,429	-				-1.9
2,143,445	-				-1.0
2,143,447	+				+0.1
2,143,447	+				+0.9
2,143,447	+				+0.1
2,143,448	-				+0.1
2,143,495	+				-0.3
2,143,495	+				+0.2
2,143,496	-				-1.1
2,143,536	+		DDA3937_RS09520	0.15	-0.5
2,143,577	+		DDA3937_RS09520	0.27	-0.3
2,143,577	+		DDA3937_RS09520	0.27	+1.1
2,143,578	-		DDA3937_RS09520	0.28	-0.3
2,143,648	+		DDA3937_RS09520	0.49	-0.4
2,143,648	+		DDA3937_RS09520	0.49	+0.6
2,143,828	-				-0.5
2,143,889	+				-0.1
2,143,889	+				+0.5
2,143,890	-				+0.6
2,143,890	-				-0.7
2,143,908	-		DDA3937_RS09525	0.11	-0.1
2,143,973	+		DDA3937_RS09525	0.19	-0.1
2,143,973	+		DDA3937_RS09525	0.19	+0.2
2,143,973	+		DDA3937_RS09525	0.19	+0.1
2,143,975	+		DDA3937_RS09525	0.19	-0.1
2,143,976	-		DDA3937_RS09525	0.19	-1.6
2,143,976	-		DDA3937_RS09525	0.19	-1.1
2,144,012	-		DDA3937_RS09525	0.23	+1.8
2,144,015	-		DDA3937_RS09525	0.23	-0.8
2,144,036	+		DDA3937_RS09525	0.26	-0.7
2,144,132	+		DDA3937_RS09525	0.37	-0.1
2,144,144	+		DDA3937_RS09525	0.38	-1.6
2,144,144	+		DDA3937_RS09525	0.38	+0.1
2,144,168	-		DDA3937_RS09525	0.41	+0.9
2,144,234	+		DDA3937_RS09525	0.48	-0.5
2,144,234	+		DDA3937_RS09525	0.48	-0.4
2,144,234	+		DDA3937_RS09525	0.48	+1.3
2,144,235	-		DDA3937_RS09525	0.49	+0.9
2,144,235	-		DDA3937_RS09525	0.49	-0.3
2,144,237	-		DDA3937_RS09525	0.49	+0.8
2,144,237	-		DDA3937_RS09525	0.49	-0.1
2,144,251	+		DDA3937_RS09525	0.50	-0.4
2,144,297	-		DDA3937_RS09525	0.56	-0.1
2,144,317	-		DDA3937_RS09525	0.58	-0.6
2,144,330	-		DDA3937_RS09525	0.59	+0.5
2,144,453	+		DDA3937_RS09525	0.74	-0.2
2,144,453	+		DDA3937_RS09525	0.74	-0.9
2,144,453	+		DDA3937_RS09525	0.74	+0.5
2,144,454	-		DDA3937_RS09525	0.74	-0.4
2,144,475	+		DDA3937_RS09525	0.76	-1.5
2,144,475	+		DDA3937_RS09525	0.76	-1.3
2,144,476	-		DDA3937_RS09525	0.76	+0.5
2,144,476	-		DDA3937_RS09525	0.76	-0.4
2,144,482	-		DDA3937_RS09525	0.77	+0.2
2,144,485	+		DDA3937_RS09525	0.77	+1.2
2,144,486	-		DDA3937_RS09525	0.77	-0.9
2,144,490	+		DDA3937_RS09525	0.78	+0.9
2,144,490	+		DDA3937_RS09525	0.78	-0.1
2,144,498	+		DDA3937_RS09525	0.79	-0.2
2,144,499	-		DDA3937_RS09525	0.79	-0.9
2,144,504	+		DDA3937_RS09525	0.79	+0.9
2,144,585	+				-0.5
2,144,642	+				-0.5
2,144,643	-				-1.1
2,144,705	+				-0.8
2,144,705	+				-0.9
2,144,705	+				-0.9
2,144,705	+				-0.1
2,144,705	+				+0.4
2,144,706	-				-0.9
2,144,706	-				-1.2
2,144,742	-				-0.3
2,144,934	+		DDA3937_RS09530	0.13	+0.2
2,144,934	+		DDA3937_RS09530	0.13	-0.1
2,144,934	+		DDA3937_RS09530	0.13	-0.1
2,144,934	+		DDA3937_RS09530	0.13	-0.1
2,144,934	+		DDA3937_RS09530	0.13	-0.2
2,144,935	-		DDA3937_RS09530	0.13	+0.1
2,144,983	+		DDA3937_RS09530	0.17	-1.1
2,144,984	-		DDA3937_RS09530	0.17	-1.1
2,144,984	-		DDA3937_RS09530	0.17	-0.6
2,145,071	+		DDA3937_RS09530	0.23	-0.8
2,145,071	+		DDA3937_RS09530	0.23	-1.6
2,145,077	-		DDA3937_RS09530	0.23	-0.9
2,145,092	-		DDA3937_RS09530	0.24	-0.1
2,145,101	-		DDA3937_RS09530	0.25	-1.2
2,145,101	-		DDA3937_RS09530	0.25	+0.8
2,145,140	+		DDA3937_RS09530	0.27	+0.5
2,145,213	-		DDA3937_RS09530	0.32	-1.4
2,145,240	-		DDA3937_RS09530	0.34	-0.9
2,145,243	+		DDA3937_RS09530	0.34	-0.4
2,145,243	+		DDA3937_RS09530	0.34	-1.2
2,145,243	+		DDA3937_RS09530	0.34	+0.3
2,145,243	+		DDA3937_RS09530	0.34	-0.4
2,145,244	-		DDA3937_RS09530	0.34	-0.5
2,145,276	-		DDA3937_RS09530	0.37	-1.1
2,145,475	+		DDA3937_RS09530	0.50	-0.6
2,145,529	-		DDA3937_RS09530	0.54	-0.8
2,145,558	-		DDA3937_RS09530	0.56	-1.1
2,145,558	-		DDA3937_RS09530	0.56	-0.3
2,145,567	-		DDA3937_RS09530	0.56	-0.6
2,145,632	+		DDA3937_RS09530	0.61	+1.3
2,145,632	+		DDA3937_RS09530	0.61	+0.6
2,145,632	+		DDA3937_RS09530	0.61	-0.1
2,145,632	+		DDA3937_RS09530	0.61	+0.4
2,145,632	+		DDA3937_RS09530	0.61	+0.3