Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09365

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,109,899	+		DDA3937_RS09360	0.63	-0.5
2,109,899	+		DDA3937_RS09360	0.63	+0.2
2,109,900	-		DDA3937_RS09360	0.63	-0.2
2,109,933	-		DDA3937_RS09360	0.65	-0.5
2,109,933	-		DDA3937_RS09360	0.65	-1.6
2,110,520	+				+0.2
2,110,627	-				+1.1
2,110,663	+				-0.8
2,110,664	-				+0.7
2,110,665	+				-0.3
2,110,665	+				-0.4
2,110,666	-				+0.4
2,110,666	-				-0.6
2,110,666	-				-1.0
2,110,683	+				-0.2
2,110,710	+				-0.1
2,110,711	-				+0.7
2,110,713	-				+0.4
2,110,762	+				-0.3
2,110,762	+				+1.1
2,110,762	+				-0.8
2,110,763	-				-1.4
2,110,787	+				-0.6
2,110,788	-				-0.8
2,110,806	+				+0.6
2,110,806	+				-0.4
2,110,807	-				-2.0
2,110,807	-				+0.5
2,110,807	-				+0.8
2,110,876	-				-1.3
2,110,876	-				+1.0
2,110,894	-				-0.3
2,110,899	+				+0.4
2,110,900	-				-0.2
2,110,901	+				+0.6
2,110,902	-				-1.0
2,110,902	-				-0.2
2,110,916	+				-0.1
2,110,920	+				-1.4
2,111,029	+				-0.1
2,111,029	+				+0.8
2,111,029	+				-1.4
2,111,029	+				+0.1
2,111,029	+				-0.5
2,111,029	+				+0.0
2,111,029	+				+1.0
2,111,030	-				-1.8
2,111,030	-				-0.3
2,111,030	-				-0.7
2,111,030	-				+0.3
2,111,030	-				+0.5
2,111,030	-				-0.6
2,111,030	-				+0.2
2,111,030	-				-1.4
2,111,031	+				-0.6
2,111,031	+				+0.4
2,111,031	+				-0.9
2,111,031	+				+0.3
2,111,031	+				-0.0
2,111,031	+				+1.0
2,111,031	+				-0.4
2,111,031	+				-0.6
2,111,031	+				-1.0
2,111,031	+				-0.5
2,111,032	-				-0.0
2,111,032	-				-0.0
2,111,032	-				-0.5
2,111,032	-				+0.1
2,111,032	-				+0.6
2,111,035	+				-0.7
2,111,036	-				-2.4
2,111,036	-				+0.5
2,111,044	+				-1.0
2,111,059	+		DDA3937_RS09365	0.11	+0.3
2,111,060	-				-1.0
2,111,110	-		DDA3937_RS09365	0.14	-1.3
2,111,153	+		DDA3937_RS09365	0.16	+0.8
2,111,207	+		DDA3937_RS09365	0.20	-0.5
2,111,207	+		DDA3937_RS09365	0.20	-1.5
2,111,208	-		DDA3937_RS09365	0.20	-1.0
2,111,208	-		DDA3937_RS09365	0.20	+0.4
2,111,208	-		DDA3937_RS09365	0.20	+0.7
2,111,229	-		DDA3937_RS09365	0.21	+0.1
2,111,232	+		DDA3937_RS09365	0.21	-0.0
2,111,233	-		DDA3937_RS09365	0.21	+1.0
2,111,233	-		DDA3937_RS09365	0.21	-0.8
2,111,236	-		DDA3937_RS09365	0.21	-2.4
2,111,236	-		DDA3937_RS09365	0.21	+0.2
2,111,241	+				-0.8
2,111,242	-		DDA3937_RS09365	0.22	-0.1
2,111,266	-		DDA3937_RS09365	0.23	-1.3
2,111,280	+		DDA3937_RS09365	0.24	-0.2
2,111,280	+		DDA3937_RS09365	0.24	-1.5
2,111,281	-		DDA3937_RS09365	0.24	-0.2
2,111,284	+		DDA3937_RS09365	0.24	+0.1
2,111,284	+		DDA3937_RS09365	0.24	-0.0
2,111,285	-		DDA3937_RS09365	0.24	+0.7
2,111,304	+		DDA3937_RS09365	0.25	-0.3
2,111,383	+		DDA3937_RS09365	0.30	-0.1
2,111,411	-		DDA3937_RS09365	0.32	+0.4
2,111,412	+		DDA3937_RS09365	0.32	+1.0
2,111,413	-		DDA3937_RS09365	0.32	-0.6
2,111,413	-		DDA3937_RS09365	0.32	+0.4
2,111,433	+		DDA3937_RS09365	0.33	-0.5
2,111,436	+		DDA3937_RS09365	0.33	+0.3
2,111,436	+		DDA3937_RS09365	0.33	-0.6
2,111,437	-		DDA3937_RS09365	0.33	-0.6
2,111,506	+		DDA3937_RS09365	0.37	-0.9
2,111,507	-		DDA3937_RS09365	0.37	+0.3
2,111,518	+		DDA3937_RS09365	0.38	+0.9
2,111,519	-		DDA3937_RS09365	0.38	+1.2
2,111,623	-		DDA3937_RS09365	0.44	-0.5
2,111,626	-		DDA3937_RS09365	0.44	-0.5
2,111,664	+		DDA3937_RS09365	0.47	-1.5
2,111,701	+		DDA3937_RS09365	0.49	-1.6
2,111,806	-		DDA3937_RS09365	0.55	-1.4
2,111,806	-		DDA3937_RS09365	0.55	-0.4
2,111,806	-		DDA3937_RS09365	0.55	-0.5
2,111,806	-		DDA3937_RS09365	0.55	-0.6
2,111,837	+		DDA3937_RS09365	0.57	+1.2
2,111,837	+		DDA3937_RS09365	0.57	+0.3
2,111,838	-		DDA3937_RS09365	0.57	-1.0
2,111,838	-		DDA3937_RS09365	0.57	-1.5
2,111,838	-		DDA3937_RS09365	0.57	+0.4
2,111,838	-		DDA3937_RS09365	0.57	-2.6
2,111,919	+		DDA3937_RS09365	0.62	+1.0
2,111,919	+		DDA3937_RS09365	0.62	+0.4
2,111,920	-		DDA3937_RS09365	0.62	-0.0
2,111,928	+		DDA3937_RS09365	0.62	-0.8
2,111,928	+		DDA3937_RS09365	0.62	-2.2
2,111,928	+		DDA3937_RS09365	0.62	-0.6
2,111,958	+		DDA3937_RS09365	0.64	-0.5
2,111,961	+		DDA3937_RS09365	0.64	-2.0
2,111,961	+		DDA3937_RS09365	0.64	+0.4
2,111,962	-		DDA3937_RS09365	0.64	-0.4
2,111,962	-		DDA3937_RS09365	0.64	-0.2
2,111,973	+		DDA3937_RS09365	0.65	-0.4
2,112,097	-		DDA3937_RS09365	0.72	-0.9
2,112,468	+				+0.3
2,112,468	+				+0.3
2,112,469	-				+0.2
2,112,543	+				+0.1
2,112,544	-				+0.1
2,112,654	+				-0.5
2,112,654	+				-0.2
2,112,654	+				-0.8
2,112,654	+				-0.0
2,112,654	+				-2.9
2,112,655	-				-0.0
2,112,655	-				-0.0
2,112,655	-				-0.4
2,112,686	+				+0.0
2,112,855	-		DDA3937_RS09370	0.16	+0.2
2,113,094	-		DDA3937_RS09370	0.51	-0.0
2,113,094	-				+1.4
2,113,123	-		DDA3937_RS09370	0.56	-1.3
2,113,462	+				-0.2
2,113,493	+				-0.0
2,113,494	-				-0.4
2,113,506	+				-0.8
2,113,506	+				-0.2
2,113,507	-				-0.5
2,113,517	-				-0.2
2,113,517	-				+1.0