Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09310

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,093,265	+		DDA3937_RS09305	0.59	-0.7
2,093,510	+		DDA3937_RS09305	0.75	-0.7
2,093,511	-		DDA3937_RS09305	0.76	+0.3
2,093,688	+		DDA3937_RS09305	0.87	-0.8
2,093,699	+		DDA3937_RS09305	0.88	-0.0
2,093,708	+		DDA3937_RS09305	0.89	+0.4
2,093,844	-				-0.7
2,093,902	-				+0.4
2,093,942	+				+1.3
2,093,943	-				-0.0
2,093,945	+				+0.5
2,094,007	+				-0.8
2,094,013	-				-0.0
2,094,028	+				-0.7
2,094,029	-				-0.3
2,094,029	-				+0.6
2,094,050	+				+0.1
2,094,051	-				-0.9
2,094,051	-				-0.0
2,094,051	-				+0.2
2,094,054	+				+1.3
2,094,054	+				-0.4
2,094,055	-				-2.0
2,094,055	-				+0.4
2,094,126	+				+0.5
2,094,127	-				-0.6
2,094,127	-				+1.0
2,094,127	-				+0.6
2,094,177	+				-1.0
2,094,178	-				-2.0
2,094,179	+				-0.8
2,094,179	+				+1.0
2,094,180	-				-0.4
2,094,258	-				-0.6
2,094,368	+		DDA3937_RS09310	0.14	+0.5
2,094,369	-		DDA3937_RS09310	0.14	-1.0
2,094,481	-				+0.4
2,094,481	-		DDA3937_RS09310	0.24	-0.1
2,094,611	+		DDA3937_RS09310	0.36	+0.2
2,094,612	-		DDA3937_RS09310	0.36	-1.2
2,094,612	-		DDA3937_RS09310	0.36	-2.8
2,094,710	+		DDA3937_RS09310	0.45	-0.5
2,094,711	-		DDA3937_RS09310	0.46	-1.8
2,094,711	-		DDA3937_RS09310	0.46	-1.5
2,094,750	-		DDA3937_RS09310	0.49	+0.3
2,094,765	+		DDA3937_RS09310	0.51	-0.6
2,094,963	-		DDA3937_RS09310	0.69	-0.4
2,095,165	+		DDA3937_RS09310	0.87	-1.0
2,095,168	+		DDA3937_RS09310	0.88	-0.0
2,095,233	-				+0.4
2,095,258	+				-0.6
2,095,258	+				-1.8
2,095,259	-				+0.6
2,095,348	+				-0.5
2,095,349	-				+0.8
2,095,353	+				-1.6
2,095,354	-				-0.3
2,095,389	+		DDA3937_RS09315	0.17	+1.0
2,095,389	+		DDA3937_RS09315	0.17	-0.6
2,095,390	-		DDA3937_RS09315	0.18	-1.9
2,095,390	-		DDA3937_RS09315	0.18	+0.0
2,095,398	+		DDA3937_RS09315	0.22	+0.9
2,095,398	+		DDA3937_RS09315	0.22	-0.5
2,095,399	-		DDA3937_RS09315	0.22	-0.4
2,095,399	-		DDA3937_RS09315	0.22	-0.4
2,095,399	-		DDA3937_RS09315	0.22	-0.3
2,095,401	+		DDA3937_RS09315	0.23	-0.2
2,095,452	-		DDA3937_RS09315	0.47	+0.4
2,095,452	-		DDA3937_RS09315	0.47	-1.0
2,095,468	-		DDA3937_RS09315	0.54	+0.5
2,095,484	+		DDA3937_RS09315	0.62	-0.3
2,095,485	-		DDA3937_RS09315	0.62	+0.3
2,095,490	+		DDA3937_RS09315	0.65	-0.4
2,095,491	-		DDA3937_RS09315	0.65	-0.0
2,095,491	-		DDA3937_RS09315	0.65	-0.7
2,095,496	+		DDA3937_RS09315	0.68	-0.0
2,095,496	+		DDA3937_RS09315	0.68	-0.4
2,095,496	+		DDA3937_RS09315	0.68	+0.3
2,095,496	+		DDA3937_RS09315	0.68	+0.6
2,095,496	+		DDA3937_RS09315	0.68	+0.4
2,095,496	+		DDA3937_RS09315	0.68	+0.2
2,095,496	+		DDA3937_RS09315	0.68	+0.3
2,095,497	-		DDA3937_RS09315	0.68	-0.5
2,095,497	-		DDA3937_RS09315	0.68	+0.2
2,095,519	-		DDA3937_RS09315	0.78	+0.4
2,095,523	+		DDA3937_RS09315	0.80	-0.4
2,095,524	-		DDA3937_RS09315	0.81	+0.8
2,095,524	-		DDA3937_RS09315	0.81	-0.3
2,095,548	-				+0.2
2,095,548	-				+0.8
2,095,548	-				-0.7
2,095,585	-				-0.8
2,095,599	-				+0.5
2,095,599	-				+0.1
2,095,610	+				-0.3
2,095,610	+				-0.6
2,095,611	-				+1.3
2,095,611	-				-3.4
2,095,611	-				+0.3
2,095,696	-				+0.2
2,095,696	-				+0.2
2,095,699	-				-0.5
2,095,707	-				+0.4
2,095,782	-				+0.3
2,095,812	+				+1.2
2,095,812	+				+1.4
2,095,958	+				+0.8
2,095,958	+				-0.0
2,095,959	-				+0.3
2,095,961	+				-0.5
2,095,961	+				-0.0
2,095,961	+				-1.6
2,095,961	+				-0.9
2,095,961	+				+0.7
2,095,962	-				+0.3
2,095,962	-				-0.3
2,095,962	-				-1.0
2,096,169	-		DDA3937_RS09320	0.33	+0.1