Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09255

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,079,445	+		DDA3937_RS09250	0.11	-0.0
2,079,469	+		DDA3937_RS09250	0.14	-1.0
2,079,472	+		DDA3937_RS09250	0.14	+1.2
2,079,472	+		DDA3937_RS09250	0.14	+0.8
2,079,473	-		DDA3937_RS09250	0.14	-0.7
2,079,473	-				-1.6
2,079,473	-		DDA3937_RS09250	0.14	+0.8
2,079,473	-		DDA3937_RS09250	0.14	-1.0
2,079,473	-		DDA3937_RS09250	0.14	-0.8
2,079,473	-		DDA3937_RS09250	0.14	-0.2
2,079,473	-		DDA3937_RS09250	0.14	+0.6
2,079,474	+		DDA3937_RS09250	0.14	-0.0
2,079,474	+		DDA3937_RS09250	0.14	-0.6
2,079,474	+		DDA3937_RS09250	0.14	-0.4
2,079,474	+		DDA3937_RS09250	0.14	-0.3
2,079,474	+		DDA3937_RS09250	0.14	-0.5
2,079,474	+		DDA3937_RS09250	0.14	+0.4
2,079,474	+		DDA3937_RS09250	0.14	-1.6
2,079,474	+		DDA3937_RS09250	0.14	+1.3
2,079,475	-		DDA3937_RS09250	0.14	-0.7
2,079,475	-		DDA3937_RS09250	0.14	+0.2
2,079,475	-		DDA3937_RS09250	0.14	-2.4
2,079,475	-		DDA3937_RS09250	0.14	+0.2
2,079,475	-		DDA3937_RS09250	0.14	-0.6
2,079,475	-		DDA3937_RS09250	0.14	-1.6
2,079,475	-		DDA3937_RS09250	0.14	+0.1
2,079,579	+		DDA3937_RS09250	0.26	+1.2
2,079,579	+		DDA3937_RS09250	0.26	-1.0
2,079,580	-		DDA3937_RS09250	0.26	-0.5
2,079,649	-		DDA3937_RS09250	0.34	-0.8
2,079,823	+		DDA3937_RS09250	0.55	-0.0
2,079,824	-		DDA3937_RS09250	0.55	-0.2
2,079,824	-		DDA3937_RS09250	0.55	-0.9
2,079,824	-				+0.3
2,079,996	+		DDA3937_RS09250	0.75	+0.4
2,079,996	+		DDA3937_RS09250	0.75	+1.5
2,079,996	+		DDA3937_RS09250	0.75	-1.3
2,079,997	-		DDA3937_RS09250	0.75	+0.4
2,079,997	-		DDA3937_RS09250	0.75	+0.1
2,079,997	-		DDA3937_RS09250	0.75	-0.0
2,079,997	-		DDA3937_RS09250	0.75	+1.0
2,080,035	+		DDA3937_RS09250	0.79	+0.3
2,080,204	-				-0.3
2,080,204	-				+0.8
2,080,204	-				-0.2
2,080,227	+				-0.0
2,080,239	-				-1.2
2,080,283	+				-0.8
2,080,283	+				+0.3
2,080,283	+				+0.6
2,080,283	+				+0.2
2,080,284	-				-1.0
2,080,284	-				+0.6
2,080,284	-				-1.0
2,080,320	+				+0.1
2,080,320	+				-1.2
2,080,320	+				-0.2
2,080,320	+				-0.5
2,080,320	+				-1.1
2,080,320	+				-0.4
2,080,320	+				+0.4
2,080,320	+				-0.2
2,080,321	-				-0.0
2,080,321	-				-1.0
2,080,321	-				-1.6
2,080,321	-				-0.8
2,080,321	-				-0.2
2,080,321	-				+0.1
2,080,321	-				+0.9
2,080,321	-				-0.4
2,080,321	-				-1.0
2,080,321	-				-1.0
2,080,321	-				-0.9
2,080,334	+				-1.4
2,080,334	+				+0.5
2,080,334	+				+0.5
2,080,334	+				+0.2
2,080,334	+				+1.0
2,080,334	+				-1.8
2,080,334	+				-0.1
2,080,334	+				-0.8
2,080,335	-				-1.3
2,080,335	-				+0.2
2,080,335	-				-0.6
2,080,335	-				+1.0
2,080,335	-				-1.4
2,080,335	-				-0.6
2,080,348	+				-0.0
2,080,348	+				-1.0
2,080,348	+				-0.0
2,080,348	+				-1.3
2,080,348	+				-3.0
2,080,348	+				-1.6
2,080,348	+				-0.2
2,080,348	+				-1.6
2,080,348	+				-0.1
2,080,348	+				+0.5
2,080,348	+				+0.3
2,080,348	+				-2.4
2,080,348	+				+0.3
2,080,348	+				+0.2
2,080,349	-				-0.1
2,080,349	-				+0.2
2,080,349	-				-0.1
2,080,349	-				-0.3
2,080,349	-				-0.3
2,080,349	-				+0.5
2,080,349	-				+0.4
2,080,349	-				+0.0
2,080,349	-				-1.5
2,080,349	-				-0.7
2,080,349	-				-1.5
2,080,349	-				+0.2
2,080,349	-				+0.6
2,080,352	+				+0.8
2,080,352	+				-0.4
2,080,352	+				+0.4
2,080,352	+				-1.2
2,080,352	+				-0.4
2,080,352	+				-0.1
2,080,352	+				-0.2
2,080,352	+				-0.0
2,080,353	-				-2.0
2,080,353	-				-0.5
2,080,353	-				+0.9
2,080,353	-				+0.8
2,080,379	+				-0.6
2,080,741	+		DDA3937_RS09255	0.35	+0.0
2,080,815	+		DDA3937_RS09255	0.42	-0.5
2,080,838	-		DDA3937_RS09255	0.44	-1.1
2,080,841	+		DDA3937_RS09255	0.44	-0.5
2,080,852	+		DDA3937_RS09255	0.45	-1.4
2,080,854	+		DDA3937_RS09255	0.46	-0.8
2,080,854	+		DDA3937_RS09255	0.46	-0.8
2,080,854	+		DDA3937_RS09255	0.46	-0.2
2,080,855	-		DDA3937_RS09255	0.46	+1.0
2,080,872	+		DDA3937_RS09255	0.47	-1.2
2,080,872	+		DDA3937_RS09255	0.47	-0.0
2,081,163	+		DDA3937_RS09255	0.74	-2.0
2,081,163	+				+0.2
2,081,164	-		DDA3937_RS09255	0.74	-1.6
2,081,241	+		DDA3937_RS09255	0.81	-0.2
2,081,249	-		DDA3937_RS09255	0.82	-0.0
2,081,333	+		DDA3937_RS09255	0.90	-0.8
2,081,333	+		DDA3937_RS09255	0.90	-1.8
2,081,333	+		DDA3937_RS09255	0.90	+0.1
2,081,334	-		DDA3937_RS09255	0.90	-0.5
2,081,336	+				+0.0
2,081,336	+				-1.4
2,081,337	-				+1.0
2,081,337	-				-0.8
2,081,414	+				+0.5
2,081,415	-				-0.3
2,081,415	-				-0.2
2,081,437	+				-1.3
2,081,438	-				-0.4
2,081,438	-				-1.5
2,081,438	-				+0.6
2,081,444	-				-0.3
2,081,476	+				+0.0
2,081,476	+				-0.5
2,081,477	-				-0.3
2,081,477	-				+0.4
2,081,477	-				+0.2
2,081,522	+				-2.6
2,081,525	-				+0.3
2,081,548	-				-1.3
2,081,553	+				+0.5
2,081,554	-				-0.4
2,081,554	-				-1.0
2,081,554	-				-0.0
2,081,554	-				-0.7
2,081,554	-				+0.4
2,081,554	-				+0.3
2,081,556	+				+0.0
2,081,562	-				-0.4
2,081,562	-				+0.0
2,081,823	+		DDA3937_RS09260	0.31	+0.3
2,081,824	-		DDA3937_RS09260	0.31	-1.6
2,081,828	-		DDA3937_RS09260	0.32	-1.6
2,081,828	-		DDA3937_RS09260	0.32	-0.0
2,081,838	+		DDA3937_RS09260	0.33	-1.4
2,081,839	-		DDA3937_RS09260	0.33	-0.1
2,081,839	-		DDA3937_RS09260	0.33	-0.2
2,081,839	-		DDA3937_RS09260	0.33	-1.4
2,081,912	+		DDA3937_RS09260	0.41	+0.0
2,081,912	+		DDA3937_RS09260	0.41	-1.0
2,081,912	+		DDA3937_RS09260	0.41	+0.4
2,081,912	+		DDA3937_RS09260	0.41	-1.7
2,081,913	-		DDA3937_RS09260	0.42	+0.1
2,081,913	-		DDA3937_RS09260	0.42	-0.0
2,081,913	-		DDA3937_RS09260	0.42	-0.2
2,081,914	+		DDA3937_RS09260	0.42	-0.5
2,081,914	+		DDA3937_RS09260	0.42	+1.4
2,081,914	+		DDA3937_RS09260	0.42	-0.6
2,081,914	+		DDA3937_RS09260	0.42	+0.7
2,081,915	-		DDA3937_RS09260	0.42	-0.4
2,081,915	-		DDA3937_RS09260	0.42	+0.5
2,081,915	-		DDA3937_RS09260	0.42	-0.0
2,081,915	-		DDA3937_RS09260	0.42	-1.0
2,081,915	-		DDA3937_RS09260	0.42	-0.5
2,081,915	-		DDA3937_RS09260	0.42	-0.9
2,081,915	-		DDA3937_RS09260	0.42	+0.2
2,081,925	+		DDA3937_RS09260	0.43	+0.3
2,081,925	+		DDA3937_RS09260	0.43	+0.2
2,081,925	+		DDA3937_RS09260	0.43	+0.2
2,082,082	-		DDA3937_RS09260	0.61	-0.1
2,082,343	+				+0.3
2,082,343	+				+0.3
2,082,343	+				-0.9
2,082,344	-				-0.7
2,082,372	-				-0.0
2,082,420	+				+1.0
2,082,421	-				-0.1
2,082,424	+				+0.5
2,082,424	+				+0.7
2,082,424	+				+0.1
2,082,424	+				-0.9
2,082,424	+				-0.5
2,082,425	-				+0.1