Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08280

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,871,652	-				-0.1
1,871,657	-				-0.5
1,871,683	-				+0.2
1,871,690	-				+0.5
1,871,690	-				-0.3
1,871,690	-				-0.6
1,871,692	-				+0.0
1,871,692	-				+0.2
1,871,699	+				+0.5
1,871,782	-				-0.2
1,871,820	-				-0.8
1,871,826	-				-0.8
1,871,826	-				-0.8
1,871,829	+				-1.1
1,871,830	-				-1.1
1,871,859	+				+1.0
1,871,938	-				+0.4
1,871,970	-				+0.6
1,871,972	+				+0.7
1,871,987	+				-0.2
1,871,988	-				+0.0
1,872,030	+				-0.7
1,872,030	+				+0.1
1,872,030	+				+0.0
1,872,031	-				-0.4
1,872,032	+				+0.0
1,872,032	+				+0.6
1,872,033	-				-1.5
1,872,114	+		DDA3937_RS08275	0.12	+0.0
1,872,114	+		DDA3937_RS08275	0.12	-0.6
1,872,135	+		DDA3937_RS08275	0.16	+1.0
1,872,176	+		DDA3937_RS08275	0.23	+0.5
1,872,176	+		DDA3937_RS08275	0.23	-0.5
1,872,176	+		DDA3937_RS08275	0.23	-1.0
1,872,177	-		DDA3937_RS08275	0.23	-0.7
1,872,181	-		DDA3937_RS08275	0.24	+1.2
1,872,203	+		DDA3937_RS08275	0.27	-0.5
1,872,204	-		DDA3937_RS08275	0.28	-1.2
1,872,284	+		DDA3937_RS08275	0.41	-0.6
1,872,285	-		DDA3937_RS08275	0.41	-2.5
1,872,285	-		DDA3937_RS08275	0.41	-0.8
1,872,347	+		DDA3937_RS08275	0.52	-0.2
1,872,354	-		DDA3937_RS08275	0.53	+0.5
1,872,355	+		DDA3937_RS08275	0.53	-1.0
1,872,355	+		DDA3937_RS08275	0.53	+1.3
1,872,355	+		DDA3937_RS08275	0.53	-0.5
1,872,356	-		DDA3937_RS08275	0.53	-1.0
1,872,356	-		DDA3937_RS08275	0.53	-0.3
1,872,383	+		DDA3937_RS08275	0.58	-0.5
1,872,384	-		DDA3937_RS08275	0.58	+0.4
1,872,384	-		DDA3937_RS08275	0.58	-0.4
1,872,384	-		DDA3937_RS08275	0.58	-0.4
1,872,384	-				+0.0
1,872,384	-		DDA3937_RS08275	0.58	+0.0
1,872,385	+		DDA3937_RS08275	0.58	+0.3
1,872,386	-		DDA3937_RS08275	0.59	-1.3
1,872,386	-		DDA3937_RS08275	0.59	-0.0
1,872,386	-		DDA3937_RS08275	0.59	+0.4
1,872,386	-		DDA3937_RS08275	0.59	+0.8
1,872,386	-		DDA3937_RS08275	0.59	-1.0
1,872,386	-		DDA3937_RS08275	0.59	+0.4
1,872,386	-		DDA3937_RS08275	0.59	+0.3
1,872,393	-		DDA3937_RS08275	0.60	-1.0
1,872,493	-		DDA3937_RS08275	0.77	-0.7
1,872,494	+		DDA3937_RS08275	0.77	-1.5
1,872,495	-		DDA3937_RS08275	0.77	-0.8
1,872,495	-		DDA3937_RS08275	0.77	-0.9
1,872,497	+		DDA3937_RS08275	0.77	-1.3
1,872,597	-				-0.3
1,872,597	-				-1.0
1,872,634	+				+0.4
1,872,635	-				+0.6
1,872,635	-				-1.4
1,872,705	-		DDA3937_RS08280	0.19	-1.2
1,872,759	+		DDA3937_RS08280	0.32	-0.3
1,872,759	+		DDA3937_RS08280	0.32	-1.0
1,872,766	+		DDA3937_RS08280	0.34	-0.2
1,872,767	-		DDA3937_RS08280	0.34	-0.7
1,872,822	+		DDA3937_RS08280	0.48	-0.1
1,872,866	-		DDA3937_RS08280	0.58	-1.8
1,873,219	+				+1.2
1,873,252	-				-0.1
1,873,328	+				+0.1
1,873,328	+				-0.5
1,873,329	-				+0.0
1,873,329	-				+0.9
1,873,336	-				-0.8
1,873,336	-				-1.3
1,873,336	-				+0.2
1,873,339	+				-0.3
1,873,340	-				-0.6
1,873,340	-				-0.7
1,873,340	-				-0.2
1,873,340	-				+0.8
1,873,340	-				+0.1
1,873,340	-				+0.2
1,873,395	-		DDA3937_RS08285	0.14	-0.5
1,873,427	+		DDA3937_RS08285	0.16	+0.8
1,873,434	+		DDA3937_RS08285	0.17	+1.1
1,873,434	+		DDA3937_RS08285	0.17	+0.3
1,873,435	-		DDA3937_RS08285	0.17	+0.2
1,873,435	-		DDA3937_RS08285	0.17	-1.0
1,873,462	+		DDA3937_RS08285	0.19	-1.7
1,873,463	-		DDA3937_RS08285	0.19	+0.0
1,873,463	-		DDA3937_RS08285	0.19	+0.2
1,873,491	+		DDA3937_RS08285	0.21	-1.5
1,873,492	-		DDA3937_RS08285	0.21	-0.6
1,873,658	-		DDA3937_RS08285	0.35	-0.3
1,873,765	+		DDA3937_RS08285	0.43	-0.3
1,873,765	+		DDA3937_RS08285	0.43	+0.0
1,873,766	-		DDA3937_RS08285	0.43	-0.8
1,873,766	-		DDA3937_RS08285	0.43	+0.0
1,873,766	-		DDA3937_RS08285	0.43	+0.2
1,873,769	+		DDA3937_RS08285	0.44	-0.1
1,873,769	+		DDA3937_RS08285	0.44	-0.5
1,873,769	+		DDA3937_RS08285	0.44	-0.5
1,873,769	+		DDA3937_RS08285	0.44	-0.6
1,873,769	+		DDA3937_RS08285	0.44	+0.2
1,873,769	+		DDA3937_RS08285	0.44	-0.4
1,873,770	-		DDA3937_RS08285	0.44	+0.2
1,873,770	-		DDA3937_RS08285	0.44	-1.0
1,873,770	-		DDA3937_RS08285	0.44	-2.7
1,873,770	-		DDA3937_RS08285	0.44	-0.1
1,873,770	-		DDA3937_RS08285	0.44	-0.7
1,873,770	-		DDA3937_RS08285	0.44	+0.1
1,873,775	-		DDA3937_RS08285	0.44	-0.4
1,873,775	-		DDA3937_RS08285	0.44	-0.4
1,873,775	-		DDA3937_RS08285	0.44	+0.3
1,873,967	+		DDA3937_RS08285	0.60	+0.1
1,873,967	+		DDA3937_RS08285	0.60	-0.4
1,873,967	+		DDA3937_RS08285	0.60	-0.3
1,873,968	-		DDA3937_RS08285	0.60	+1.3
1,873,968	-		DDA3937_RS08285	0.60	-0.3
1,873,968	-		DDA3937_RS08285	0.60	-0.9
1,873,968	-		DDA3937_RS08285	0.60	+0.1
1,873,968	-		DDA3937_RS08285	0.60	-0.1
1,873,968	-		DDA3937_RS08285	0.60	-1.4