Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07550

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,703,958	+		DDA3937_RS07545	0.80	+1.1
1,703,958	+		DDA3937_RS07545	0.80	-0.8
1,703,958	+		DDA3937_RS07545	0.80	+1.1
1,703,958	+		DDA3937_RS07545	0.80	-1.2
1,703,959	-		DDA3937_RS07545	0.80	-2.0
1,703,959	-		DDA3937_RS07545	0.80	+1.1
1,704,095	+				-0.7
1,704,095	+				-0.7
1,704,095	+				-1.1
1,704,096	-				+0.0
1,704,141	-				+0.9
1,704,141	-				-0.0
1,704,141	-				-0.3
1,704,194	+				-0.4
1,704,195	-				-0.0
1,704,200	-				+0.5
1,704,200	-				-0.7
1,704,220	+				-0.1
1,704,221	-				-0.2
1,704,254	-				+0.1
1,704,286	+				-0.1
1,704,286	+				-0.2
1,704,288	+				+0.3
1,704,320	-				-0.2
1,704,320	-				-1.8
1,704,361	-				-0.9
1,704,414	-				-0.1
1,704,419	-				+1.5
1,704,439	+				-2.9
1,704,576	+				+0.6
1,704,817	+				-0.2
1,704,855	-				+0.7
1,704,864	+				+0.1
1,704,867	+				+0.4
1,704,887	+				-0.1
1,704,887	+				+0.6
1,704,900	+				-0.3
1,704,900	+				-0.0
1,704,900	+				+0.6
1,704,901	-				-1.1
1,704,994	+				-2.2
1,704,994	+				+1.1
1,704,994	+				-1.7
1,704,994	+				-1.1
1,705,110	+		DDA3937_RS07550	0.28	-0.7
1,705,111	-		DDA3937_RS07550	0.28	+0.4
1,705,111	-		DDA3937_RS07550	0.28	-0.9
1,705,111	-		DDA3937_RS07550	0.28	-0.8
1,705,113	+		DDA3937_RS07550	0.28	-0.8
1,705,113	+		DDA3937_RS07550	0.28	-0.8
1,705,114	-		DDA3937_RS07550	0.29	+0.1
1,705,253	+		DDA3937_RS07550	0.51	-0.9
1,705,253	+		DDA3937_RS07550	0.51	-0.5
1,705,253	+		DDA3937_RS07550	0.51	-0.9
1,705,253	+		DDA3937_RS07550	0.51	-0.0
1,705,253	+		DDA3937_RS07550	0.51	-1.1
1,705,253	+		DDA3937_RS07550	0.51	-0.3
1,705,253	+		DDA3937_RS07550	0.51	-1.1
1,705,253	+		DDA3937_RS07550	0.51	-0.3
1,705,254	-		DDA3937_RS07550	0.51	-0.9
1,705,254	-		DDA3937_RS07550	0.51	+1.4
1,705,254	-		DDA3937_RS07550	0.51	-1.1
1,705,254	-		DDA3937_RS07550	0.51	-0.1
1,705,254	-		DDA3937_RS07550	0.51	-0.8
1,705,254	-		DDA3937_RS07550	0.51	-0.0
1,705,254	-				+1.7
1,705,316	+		DDA3937_RS07550	0.61	+0.1
1,705,316	+		DDA3937_RS07550	0.61	-2.1
1,705,316	+		DDA3937_RS07550	0.61	-0.3
1,705,316	+		DDA3937_RS07550	0.61	-0.1
1,705,316	+		DDA3937_RS07550	0.61	-1.0
1,705,316	+		DDA3937_RS07550	0.61	-0.5
1,705,317	-		DDA3937_RS07550	0.61	+0.5
1,705,317	-		DDA3937_RS07550	0.61	-0.3
1,705,317	-		DDA3937_RS07550	0.61	+0.9
1,705,363	+		DDA3937_RS07550	0.68	-1.7
1,705,363	+		DDA3937_RS07550	0.68	-1.2
1,705,383	+		DDA3937_RS07550	0.71	-0.2
1,705,384	-				+0.1
1,705,386	+		DDA3937_RS07550	0.72	+0.3
1,705,386	+		DDA3937_RS07550	0.72	-0.2
1,705,387	-		DDA3937_RS07550	0.72	-0.4
1,705,410	+		DDA3937_RS07550	0.76	+1.4
1,705,411	-		DDA3937_RS07550	0.76	-0.4
1,705,411	-		DDA3937_RS07550	0.76	-0.8
1,705,546	+				-0.4
1,705,547	-				-0.4
1,705,563	+				-0.9
1,705,564	-				-0.2
1,705,652	-				-1.8
1,705,652	-				+0.3
1,705,671	+				-1.3
1,705,671	+				+0.8
1,705,671	+				+0.5
1,705,686	+				+0.6
1,705,686	+				-0.2
1,705,686	+				-0.2
1,705,689	+				-2.0
1,705,689	+				+0.8
1,705,689	+				-0.5
1,705,690	-				-0.9
1,705,690	-				-0.9
1,705,690	-				+0.0
1,705,690	-				-2.2
1,705,690	-				-0.1
1,705,736	+				+0.1
1,705,736	+				+0.3
1,705,737	-				+0.2
1,705,872	-				+1.2
1,705,872	-				-0.8
1,705,975	+		DDA3937_RS07555	0.15	-0.3
1,706,296	+		DDA3937_RS07555	0.37	-0.2
1,706,296	+		DDA3937_RS07555	0.37	-0.2
1,706,296	+		DDA3937_RS07555	0.37	+0.7
1,706,297	-		DDA3937_RS07555	0.37	-0.1
1,706,297	-		DDA3937_RS07555	0.37	-1.5
1,706,297	-		DDA3937_RS07555	0.37	+0.3
1,706,297	-		DDA3937_RS07555	0.37	-0.4
1,706,372	-		DDA3937_RS07555	0.42	+0.0
1,706,372	-		DDA3937_RS07555	0.42	-1.1
1,706,484	-		DDA3937_RS07555	0.49	-0.4
1,706,530	+		DDA3937_RS07555	0.52	-0.1
1,706,556	+		DDA3937_RS07555	0.54	-1.5