Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07380

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,664,633	+		DDA3937_RS07375	0.77	+0.1
1,664,633	+		DDA3937_RS07375	0.77	-0.5
1,664,633	+		DDA3937_RS07375	0.77	-0.5
1,664,634	-		DDA3937_RS07375	0.77	-0.2
1,664,634	-		DDA3937_RS07375	0.77	-0.8
1,664,634	-		DDA3937_RS07375	0.77	-0.3
1,664,634	-		DDA3937_RS07375	0.77	-0.5
1,664,634	-		DDA3937_RS07375	0.77	-1.6
1,664,699	+		DDA3937_RS07375	0.79	+0.1
1,664,700	-		DDA3937_RS07375	0.79	+1.1
1,664,750	+		DDA3937_RS07375	0.80	-0.4
1,664,751	-		DDA3937_RS07375	0.80	+0.1
1,664,751	-		DDA3937_RS07375	0.80	-0.3
1,665,038	+		DDA3937_RS07375	0.90	+0.6
1,665,039	-		DDA3937_RS07375	0.90	-0.1
1,665,039	-		DDA3937_RS07375	0.90	+0.1
1,665,084	+				-0.7
1,665,084	+				+0.1
1,665,084	+				-0.2
1,665,084	+				+0.5
1,665,087	+				-0.8
1,665,087	+				-0.2
1,665,152	+				-0.6
1,665,153	-				+0.3
1,665,310	-				+0.2
1,665,342	-				-0.4
1,665,342	-				+1.0
1,665,342	-				+0.1
1,665,360	+				-0.4
1,665,361	-				+0.0
1,665,380	+				-0.2
1,665,380	+				-0.2
1,665,542	-				-0.1
1,665,542	-				-0.5
1,665,549	+				-0.6
1,665,550	-				-0.8
1,665,550	-				+0.6
1,665,550	-				-1.1
1,665,550	-				-1.5
1,665,550	-				-0.6
1,665,566	+				+0.2
1,665,567	-				-0.9
1,665,836	-		DDA3937_RS07380	0.27	-2.3
1,666,249	-				+0.8
1,666,258	-		DDA3937_RS07380	0.66	-0.8
1,666,317	+		DDA3937_RS07380	0.72	-0.4
1,666,317	+		DDA3937_RS07380	0.72	-0.1
1,666,317	+		DDA3937_RS07380	0.72	+0.1
1,666,317	+		DDA3937_RS07380	0.72	+0.1
1,666,317	+		DDA3937_RS07380	0.72	-1.0
1,666,317	+		DDA3937_RS07380	0.72	-1.4
1,666,332	+		DDA3937_RS07380	0.73	+0.1
1,666,332	+		DDA3937_RS07380	0.73	+0.9
1,666,332	+		DDA3937_RS07380	0.73	+0.3
1,666,333	-		DDA3937_RS07380	0.73	-0.6
1,666,333	-		DDA3937_RS07380	0.73	-2.2
1,666,333	-		DDA3937_RS07380	0.73	+0.4
1,666,474	+		DDA3937_RS07380	0.86	-0.3
1,666,474	+		DDA3937_RS07380	0.86	-1.2
1,666,474	+		DDA3937_RS07380	0.86	+0.4
1,666,474	+		DDA3937_RS07380	0.86	-0.1
1,666,474	+		DDA3937_RS07380	0.86	-1.1
1,666,475	-		DDA3937_RS07380	0.87	-0.4
1,666,475	-		DDA3937_RS07380	0.87	-0.5
1,666,475	-		DDA3937_RS07380	0.87	-2.1
1,666,579	+				-2.1
1,666,579	+				-0.6
1,666,580	-				-1.4
1,666,664	+				+0.9
1,666,740	+				-0.4
1,666,744	-				+0.2
1,666,788	+		DDA3937_RS07385	0.11	-2.1
1,666,936	-		DDA3937_RS07385	0.32	-0.2
1,666,936	-		DDA3937_RS07385	0.32	+0.1
1,666,941	+		DDA3937_RS07385	0.33	-0.4
1,666,941	+		DDA3937_RS07385	0.33	+0.7
1,666,941	+		DDA3937_RS07385	0.33	-0.1
1,666,941	+		DDA3937_RS07385	0.33	+0.0
1,666,942	-		DDA3937_RS07385	0.33	-1.5
1,666,942	-		DDA3937_RS07385	0.33	-0.2
1,666,987	+		DDA3937_RS07385	0.39	+0.8
1,666,987	+		DDA3937_RS07385	0.39	-2.4
1,666,987	+		DDA3937_RS07385	0.39	-0.2
1,666,988	-		DDA3937_RS07385	0.39	-0.0
1,667,111	-		DDA3937_RS07385	0.56	-0.2
1,667,223	+		DDA3937_RS07385	0.72	-0.2
1,667,223	+		DDA3937_RS07385	0.72	-0.0
1,667,223	+		DDA3937_RS07385	0.72	+1.4
1,667,223	+		DDA3937_RS07385	0.72	+0.9
1,667,223	+		DDA3937_RS07385	0.72	+1.2
1,667,223	+		DDA3937_RS07385	0.72	-1.5
1,667,223	+		DDA3937_RS07385	0.72	+0.4
1,667,224	-		DDA3937_RS07385	0.72	-0.9
1,667,224	-		DDA3937_RS07385	0.72	-0.4
1,667,224	-		DDA3937_RS07385	0.72	+0.5
1,667,224	-		DDA3937_RS07385	0.72	+0.2
1,667,266	+		DDA3937_RS07385	0.78	+0.1
1,667,266	+		DDA3937_RS07385	0.78	-0.9
1,667,267	-		DDA3937_RS07385	0.78	-0.4
1,667,317	+		DDA3937_RS07385	0.85	-1.2
1,667,317	+		DDA3937_RS07385	0.85	+0.6
1,667,317	+		DDA3937_RS07385	0.85	-0.0
1,667,317	+		DDA3937_RS07385	0.85	-0.2
1,667,317	+		DDA3937_RS07385	0.85	-1.6
1,667,317	+		DDA3937_RS07385	0.85	-0.2
1,667,317	+		DDA3937_RS07385	0.85	-1.9
1,667,318	-		DDA3937_RS07385	0.85	-0.2
1,667,318	-		DDA3937_RS07385	0.85	+0.1
1,667,318	-		DDA3937_RS07385	0.85	-0.5
1,667,318	-		DDA3937_RS07385	0.85	-0.1
1,667,318	-		DDA3937_RS07385	0.85	+0.4
1,667,318	-		DDA3937_RS07385	0.85	-0.1
1,667,318	-		DDA3937_RS07385	0.85	+2.4
1,667,318	-		DDA3937_RS07385	0.85	+0.2
1,667,318	-		DDA3937_RS07385	0.85	-2.0
1,667,412	-				-0.1
1,667,512	+				-1.4
1,667,513	-				-0.4
1,667,532	+				-0.1
1,667,544	+				+0.1
1,667,584	-				-1.6
1,667,605	+				-1.8