Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS06510 and DDA3937_RS06515 are separated by 132 nucleotides DDA3937_RS06515 and DDA3937_RS06520 are separated by 38 nucleotides DDA3937_RS06520 and DDA3937_RS06525 are separated by 9 nucleotides
DDA3937_RS06510: DDA3937_RS06510 - cell envelope integrity protein TolA, at 1,454,001 to 1,455,197
_RS06510
DDA3937_RS06515: DDA3937_RS06515 - Tol-Pal system protein TolB, at 1,455,330 to 1,456,616
_RS06515
DDA3937_RS06520: DDA3937_RS06520 - peptidoglycan-associated lipoprotein Pal, at 1,456,655 to 1,457,161
_RS06520
DDA3937_RS06525: DDA3937_RS06525 - cell division protein CpoB, at 1,457,171 to 1,457,995
_RS06525
Position (kb)
1455
1456
1457 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1455.227 kb on + strand at 1455.227 kb on + strand at 1455.227 kb on + strand at 1455.227 kb on + strand at 1455.228 kb on - strand at 1455.228 kb on - strand at 1455.228 kb on - strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.233 kb on + strand at 1455.234 kb on - strand at 1455.235 kb on + strand at 1455.235 kb on + strand at 1455.235 kb on + strand at 1455.235 kb on + strand at 1455.235 kb on + strand at 1455.299 kb on + strand at 1455.299 kb on + strand at 1456.607 kb on + strand at 1456.608 kb on + strand at 1456.608 kb on + strand at 1456.608 kb on + strand at 1456.608 kb on + strand at 1456.608 kb on + strand at 1456.608 kb on + strand at 1456.610 kb on + strand at 1456.610 kb on + strand at 1456.610 kb on + strand at 1456.610 kb on + strand at 1456.610 kb on + strand at 1456.614 kb on + strand at 1456.614 kb on + strand at 1456.623 kb on + strand at 1456.623 kb on + strand at 1456.627 kb on + strand at 1456.637 kb on + strand at 1456.637 kb on + strand at 1456.641 kb on + strand at 1457.155 kb on - strand at 1457.156 kb on + strand at 1457.156 kb on + strand at 1457.156 kb on + strand at 1457.156 kb on + strand at 1457.157 kb on - strand at 1457.157 kb on - strand at 1457.157 kb on - strand at 1457.157 kb on - strand at 1457.159 kb on + strand at 1457.159 kb on + strand at 1457.159 kb on + strand at 1457.159 kb on + strand at 1457.160 kb on - strand at 1457.160 kb on - strand at 1457.160 kb on - strand at 1457.264 kb on - strand, within DDA3937_RS06525 at 1457.311 kb on + strand, within DDA3937_RS06525 at 1457.312 kb on - strand, within DDA3937_RS06525 at 1457.334 kb on + strand, within DDA3937_RS06525 at 1457.334 kb on + strand, within DDA3937_RS06525 at 1457.334 kb on + strand, within DDA3937_RS06525 at 1457.334 kb on + strand at 1457.453 kb on + strand, within DDA3937_RS06525 at 1457.453 kb on + strand, within DDA3937_RS06525 at 1457.453 kb on + strand, within DDA3937_RS06525 at 1457.581 kb on + strand, within DDA3937_RS06525 at 1457.587 kb on + strand, within DDA3937_RS06525
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,455,227 + +0.5 1,455,227 + -1.4 1,455,227 + -0.4 1,455,227 + -0.7 1,455,228 - -1.4 1,455,228 - -2.4 1,455,228 - +1.8 1,455,233 + -0.9 1,455,233 + +0.3 1,455,233 + -0.0 1,455,233 + -0.2 1,455,233 + -0.0 1,455,233 + +0.9 1,455,233 + -0.2 1,455,233 + -0.8 1,455,233 + -0.1 1,455,233 + -1.4 1,455,233 + -1.1 1,455,233 + -0.8 1,455,233 + -0.1 1,455,234 - +0.2 1,455,235 + +0.3 1,455,235 + -0.5 1,455,235 + +0.0 1,455,235 + +0.8 1,455,235 + -0.4 1,455,299 + +1.2 1,455,299 + -0.7 1,456,607 + -0.5 1,456,608 + -0.7 1,456,608 + +1.2 1,456,608 + +0.6 1,456,608 + +0.2 1,456,608 + +0.6 1,456,608 + -0.0 1,456,610 + +0.2 1,456,610 + -0.6 1,456,610 + +0.2 1,456,610 + -0.2 1,456,610 + -0.7 1,456,614 + +0.1 1,456,614 + -1.1 1,456,623 + +0.6 1,456,623 + -0.3 1,456,627 + +0.5 1,456,637 + -0.2 1,456,637 + +0.1 1,456,641 + +0.8 1,457,155 - -2.1 1,457,156 + -1.1 1,457,156 + -0.0 1,457,156 + -0.7 1,457,156 + +0.6 1,457,157 - +0.2 1,457,157 - -3.1 1,457,157 - -0.9 1,457,157 - +0.6 1,457,159 + +0.6 1,457,159 + +0.5 1,457,159 + -0.4 1,457,159 + -0.6 1,457,160 - -0.8 1,457,160 - -0.4 1,457,160 - -2.4 1,457,264 - DDA3937_RS06525 0.11 -0.2 1,457,311 + DDA3937_RS06525 0.17 -1.4 1,457,312 - DDA3937_RS06525 0.17 -1.6 1,457,334 + DDA3937_RS06525 0.20 -1.2 1,457,334 + DDA3937_RS06525 0.20 -0.5 1,457,334 + DDA3937_RS06525 0.20 -0.1 1,457,334 + -2.1 1,457,453 + DDA3937_RS06525 0.34 +0.5 1,457,453 + DDA3937_RS06525 0.34 +1.0 1,457,453 + DDA3937_RS06525 0.34 -0.3 1,457,581 + DDA3937_RS06525 0.50 +0.1 1,457,587 + DDA3937_RS06525 0.50 +1.4
Or see this region's nucleotide sequence