Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06455

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,440,235	+		DDA3937_RS06450	0.47	-0.1
1,440,273	-		DDA3937_RS06450	0.49	-0.1
1,440,342	+		DDA3937_RS06450	0.53	+0.4
1,440,428	+		DDA3937_RS06450	0.58	+1.1
1,440,428	+		DDA3937_RS06450	0.58	+0.4
1,440,428	+		DDA3937_RS06450	0.58	+1.0
1,440,428	+		DDA3937_RS06450	0.58	+0.4
1,440,428	+		DDA3937_RS06450	0.58	+0.7
1,440,429	-		DDA3937_RS06450	0.58	+0.8
1,440,429	-		DDA3937_RS06450	0.58	-0.3
1,440,429	-		DDA3937_RS06450	0.58	+1.0
1,440,472	+		DDA3937_RS06450	0.60	-0.5
1,440,472	+		DDA3937_RS06450	0.60	+0.1
1,440,472	+		DDA3937_RS06450	0.60	+0.3
1,440,472	+		DDA3937_RS06450	0.60	+0.4
1,440,473	-		DDA3937_RS06450	0.60	+0.5
1,440,473	-		DDA3937_RS06450	0.60	+0.3
1,440,473	-		DDA3937_RS06450	0.60	-0.4
1,440,473	-		DDA3937_RS06450	0.60	+0.1
1,440,473	-		DDA3937_RS06450	0.60	+1.1
1,440,486	+		DDA3937_RS06450	0.61	+0.9
1,440,590	+		DDA3937_RS06450	0.67	+0.3
1,440,591	-		DDA3937_RS06450	0.67	+0.5
1,440,657	+		DDA3937_RS06450	0.71	-0.1
1,440,666	-		DDA3937_RS06450	0.71	+0.5
1,440,666	-		DDA3937_RS06450	0.71	+0.2
1,440,756	+		DDA3937_RS06450	0.76	+0.6
1,440,807	+		DDA3937_RS06450	0.79	+0.2
1,440,807	+		DDA3937_RS06450	0.79	+0.7
1,440,808	-		DDA3937_RS06450	0.79	+0.1
1,440,808	-		DDA3937_RS06450	0.79	+1.3
1,440,816	+		DDA3937_RS06450	0.80	+0.6
1,440,817	-		DDA3937_RS06450	0.80	+0.9
1,440,817	-		DDA3937_RS06450	0.80	+0.7
1,440,912	+		DDA3937_RS06450	0.85	+0.6
1,440,912	+		DDA3937_RS06450	0.85	+0.8
1,440,913	-		DDA3937_RS06450	0.85	+1.2
1,440,913	-		DDA3937_RS06450	0.85	+0.2
1,440,913	-				+1.4
1,441,042	+				+1.1
1,441,084	+				+0.2
1,441,084	+				+0.3
1,441,085	-				-0.1
1,441,085	-				+1.8
1,441,135	-				+1.2
1,441,167	+				-0.3
1,441,167	+				+0.5
1,441,167	+				-0.5
1,441,167	+				+0.4
1,441,168	-				+0.0
1,441,168	-				+1.3
1,441,168	-				+1.1
1,441,168	-				+0.7
1,441,168	-				+1.2
1,441,171	+				+0.9
1,441,171	+				-0.1
1,441,172	-				-0.8
1,441,172	-				+0.8
1,441,172	-				+0.4
1,441,172	-				-0.1
1,441,172	-				-0.1
1,441,174	+				+0.6
1,441,174	+				-0.3
1,441,174	+				-0.1
1,441,175	-				+0.3
1,441,216	+				+0.6
1,441,216	+				-0.1
1,441,217	-				+1.1
1,441,217	-				+0.4
1,441,217	-				+0.3
1,441,217	-				+0.2
1,441,217	-				+0.3
1,441,223	-				+1.6
1,441,223	-				+0.6
1,441,261	+				+0.6
1,441,262	-				+0.7
1,441,262	-				+0.3
1,441,262	-				+0.8
1,441,262	-				+0.7
1,441,263	+				+1.0
1,441,263	+				+1.4
1,441,263	+				+0.7
1,441,264	-				-0.3
1,441,264	-				+1.1
1,441,264	-				+0.2
1,441,422	+		DDA3937_RS06455	0.32	+1.0
1,441,422	+		DDA3937_RS06455	0.32	+0.3
1,441,423	-		DDA3937_RS06455	0.32	-0.1
1,441,525	+		DDA3937_RS06455	0.46	+1.4
1,441,552	+		DDA3937_RS06455	0.50	+1.2
1,441,701	+		DDA3937_RS06455	0.71	+0.0
1,441,764	+		DDA3937_RS06455	0.79	+0.2
1,441,802	+		DDA3937_RS06455	0.85	+0.0
1,441,903	-				+1.2
1,441,927	-				-0.1
1,442,102	+				+0.8
1,442,102	+				+1.1
1,442,102	+				+0.9
1,442,102	+				+0.3
1,442,102	+				+1.8
1,442,135	+				-0.2
1,442,135	+				+0.7
1,442,135	+				+0.8
1,442,135	+				+0.3
1,442,138	+				+0.1
1,442,138	+				+0.4