Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS05865

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,313,750	+		DDA3937_RS05860	0.15	-1.7
1,313,750	+				+0.3
1,313,750	+				+0.3
1,313,751	-				-0.7
1,313,751	-		DDA3937_RS05860	0.15	-1.3
1,313,768	+		DDA3937_RS05860	0.17	+0.1
1,313,768	+				+0.3
1,313,769	-		DDA3937_RS05860	0.17	-0.4
1,313,769	-		DDA3937_RS05860	0.17	-0.9
1,313,898	+		DDA3937_RS05860	0.31	-1.0
1,313,970	+		DDA3937_RS05860	0.39	-0.4
1,313,971	-		DDA3937_RS05860	0.39	+1.0
1,313,986	-		DDA3937_RS05860	0.41	+0.2
1,314,126	+		DDA3937_RS05860	0.56	-0.0
1,314,127	-		DDA3937_RS05860	0.56	+0.3
1,314,127	-		DDA3937_RS05860	0.56	+0.1
1,314,169	+		DDA3937_RS05860	0.61	+0.4
1,314,306	+		DDA3937_RS05860	0.76	+0.3
1,314,307	-		DDA3937_RS05860	0.76	-0.1
1,314,345	+		DDA3937_RS05860	0.80	-0.6
1,314,345	+		DDA3937_RS05860	0.80	-0.7
1,314,434	-				+0.0
1,314,434	-				+0.6
1,314,587	+				+0.5
1,314,588	-				-0.6
1,314,591	-				-0.8
1,314,660	+				-1.3
1,314,661	-				+0.1
1,314,661	-				-0.7
1,314,664	+				+0.3
1,314,664	+				-1.7
1,314,665	-				+1.5
1,314,665	-				-0.2
1,314,665	-				+0.2
1,314,691	+		DDA3937_RS05865	0.12	-1.2
1,314,692	-		DDA3937_RS05865	0.13	+1.3
1,314,692	-		DDA3937_RS05865	0.13	-0.5
1,314,811	-		DDA3937_RS05865	0.58	+1.3
1,314,811	-		DDA3937_RS05865	0.58	-1.1
1,314,922	+				-0.5
1,314,922	+				-0.8
1,314,922	+				-0.4
1,314,923	-				+0.3
1,314,923	-				-0.3
1,314,923	-				+0.6
1,314,923	-				-0.6
1,314,923	-				-0.3
1,314,923	-				-0.6
1,314,923	-				+1.1
1,314,923	-				-0.0
1,314,926	+				+0.1
1,314,928	+				-1.0
1,314,928	+				-0.8
1,314,928	+				-1.0
1,314,928	+				+0.7
1,314,929	-				+1.1
1,314,929	-				+0.5
1,314,929	-				+1.3
1,314,929	-				+0.3
1,314,929	-				+0.0
1,314,929	-				-0.7
1,314,929	-				+0.6
1,314,932	+				-1.5
1,314,932	+				+0.3
1,314,932	+				+0.9
1,314,932	+				-0.3
1,314,932	+				-0.1
1,314,933	-				-1.0
1,314,933	-				-0.4
1,314,933	-				+0.5
1,314,933	-				-0.5
1,314,937	+				+0.5
1,314,937	+				+0.4
1,314,937	+				-0.7
1,314,937	+				+0.2
1,314,937	+				-1.0
1,314,937	+				-0.6
1,314,937	+				-0.6
1,314,938	-				+0.0
1,314,938	-				-1.6
1,314,938	-				+0.3
1,314,938	-				-0.2
1,314,941	+				-0.7
1,314,941	+				-0.9
1,314,941	+				-1.1
1,314,941	+				-0.3
1,314,941	+				-1.0
1,314,941	+				+0.1
1,314,942	-				+1.3
1,314,942	-				-0.7
1,314,942	-				+1.5
1,314,942	-				+0.1