Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS04625

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,019,142	+				-0.3
1,019,143	-				+0.0
1,019,143	-				-1.2
1,019,149	-				+0.3
1,019,149	-				+0.2
1,019,149	-				+1.0
1,019,149	-				+2.0
1,019,171	-				+1.4
1,019,203	+				+0.1
1,019,203	+				-0.7
1,019,203	+				+2.4
1,019,204	-				+0.3
1,019,204	-				-0.4
1,019,204	-				-0.1
1,019,204	-				+0.0
1,019,204	-				-1.0
1,019,279	-		DDA3937_RS04620	0.13	-0.3
1,019,279	-		DDA3937_RS04620	0.13	-0.7
1,019,347	+		DDA3937_RS04620	0.21	-0.4
1,019,347	+		DDA3937_RS04620	0.21	-1.2
1,019,348	-		DDA3937_RS04620	0.22	-0.1
1,019,502	+		DDA3937_RS04620	0.40	-1.0
1,019,502	+		DDA3937_RS04620	0.40	+2.7
1,019,503	-		DDA3937_RS04620	0.40	-0.2
1,019,549	+		DDA3937_RS04620	0.46	-0.5
1,019,551	+		DDA3937_RS04620	0.46	-0.8
1,019,551	+		DDA3937_RS04620	0.46	-0.0
1,019,551	+		DDA3937_RS04620	0.46	+0.0
1,019,551	+		DDA3937_RS04620	0.46	-0.2
1,019,551	+		DDA3937_RS04620	0.46	-0.0
1,019,551	+		DDA3937_RS04620	0.46	-1.9
1,019,551	+		DDA3937_RS04620	0.46	+1.8
1,019,551	+		DDA3937_RS04620	0.46	+0.7
1,019,551	+		DDA3937_RS04620	0.46	+0.7
1,019,551	+		DDA3937_RS04620	0.46	-0.9
1,019,552	-		DDA3937_RS04620	0.46	+0.4
1,019,552	-		DDA3937_RS04620	0.46	-0.6
1,019,552	-		DDA3937_RS04620	0.46	+0.0
1,019,552	-		DDA3937_RS04620	0.46	-1.0
1,019,552	-		DDA3937_RS04620	0.46	+0.4
1,019,560	+		DDA3937_RS04620	0.47	+0.1
1,019,560	+		DDA3937_RS04620	0.47	-0.5
1,019,561	-		DDA3937_RS04620	0.47	-0.7
1,019,617	+		DDA3937_RS04620	0.54	-0.2
1,019,617	+		DDA3937_RS04620	0.54	-0.1
1,019,618	-		DDA3937_RS04620	0.54	-1.2
1,019,783	+		DDA3937_RS04620	0.74	+0.1
1,019,786	+		DDA3937_RS04620	0.75	-0.4
1,020,030	+				+0.2
1,020,120	+		DDA3937_RS04625	0.15	-2.8
1,020,120	+		DDA3937_RS04625	0.15	+0.4
1,020,120	+		DDA3937_RS04625	0.15	+0.4
1,020,121	-		DDA3937_RS04625	0.15	-1.3
1,020,121	-		DDA3937_RS04625	0.15	-0.6
1,020,121	-		DDA3937_RS04625	0.15	-2.5
1,020,121	-		DDA3937_RS04625	0.15	-1.9
1,020,121	-				-1.6
1,020,121	-		DDA3937_RS04625	0.15	-0.2
1,020,121	-		DDA3937_RS04625	0.15	+0.5
1,020,124	+		DDA3937_RS04625	0.15	-1.3
1,020,124	+		DDA3937_RS04625	0.15	-0.6
1,020,124	+		DDA3937_RS04625	0.15	+0.2
1,020,124	+		DDA3937_RS04625	0.15	-0.7
1,020,124	+		DDA3937_RS04625	0.15	+0.9
1,020,124	+		DDA3937_RS04625	0.15	-1.0
1,020,124	+		DDA3937_RS04625	0.15	-0.2
1,020,124	+		DDA3937_RS04625	0.15	-0.8
1,020,124	+		DDA3937_RS04625	0.15	+0.2
1,020,125	-		DDA3937_RS04625	0.15	-0.3
1,020,125	-		DDA3937_RS04625	0.15	+0.5
1,020,125	-		DDA3937_RS04625	0.15	+0.7
1,020,125	-		DDA3937_RS04625	0.15	-1.2
1,020,126	+		DDA3937_RS04625	0.15	-0.4
1,020,126	+		DDA3937_RS04625	0.15	+0.3
1,020,126	+		DDA3937_RS04625	0.15	-1.2
1,020,126	+		DDA3937_RS04625	0.15	-0.1
1,020,126	+		DDA3937_RS04625	0.15	-0.8
1,020,126	+		DDA3937_RS04625	0.15	-0.4
1,020,126	+		DDA3937_RS04625	0.15	+1.7
1,020,126	+		DDA3937_RS04625	0.15	-0.1
1,020,126	+		DDA3937_RS04625	0.15	-0.3
1,020,127	-		DDA3937_RS04625	0.15	-0.0
1,020,127	-		DDA3937_RS04625	0.15	-1.6
1,020,127	-		DDA3937_RS04625	0.15	+0.3
1,020,127	-		DDA3937_RS04625	0.15	-1.0
1,020,127	-		DDA3937_RS04625	0.15	-1.8
1,020,127	-		DDA3937_RS04625	0.15	+0.2
1,020,264	+		DDA3937_RS04625	0.31	+0.2
1,020,264	+		DDA3937_RS04625	0.31	-0.1
1,020,264	+		DDA3937_RS04625	0.31	+0.3
1,020,351	-		DDA3937_RS04625	0.41	-1.2
1,020,487	-		DDA3937_RS04625	0.57	+0.9
1,020,508	+		DDA3937_RS04625	0.59	-0.7
1,020,544	-		DDA3937_RS04625	0.63	-1.3
1,020,705	+		DDA3937_RS04625	0.82	-0.3
1,020,705	+		DDA3937_RS04625	0.82	-0.8
1,020,741	+		DDA3937_RS04625	0.86	-0.1
1,020,762	+		DDA3937_RS04625	0.88	-0.1
1,020,762	+		DDA3937_RS04625	0.88	+0.4
1,020,762	+		DDA3937_RS04625	0.88	-0.3
1,020,762	+		DDA3937_RS04625	0.88	+0.1
1,020,763	-		DDA3937_RS04625	0.89	-0.2
1,020,763	-		DDA3937_RS04625	0.89	+1.3
1,020,763	-		DDA3937_RS04625	0.89	+0.4
1,020,763	-		DDA3937_RS04625	0.89	-0.6
1,020,800	+				+0.6
1,020,801	-				+0.7
1,020,891	-				+0.4
1,020,924	+				-0.6
1,020,924	+				+0.0
1,020,932	+				+0.0
1,021,009	-				-1.1
1,021,009	-				-1.0
1,021,095	+		DDA3937_RS04630	0.13	-1.0
1,021,104	+		DDA3937_RS04630	0.14	+0.1
1,021,131	+		DDA3937_RS04630	0.16	+2.7
1,021,131	+		DDA3937_RS04630	0.16	-1.2
1,021,131	+		DDA3937_RS04630	0.16	+1.3
1,021,203	+		DDA3937_RS04630	0.22	+0.3
1,021,379	+		DDA3937_RS04630	0.35	-0.5
1,021,379	+		DDA3937_RS04630	0.35	+0.3
1,021,379	+		DDA3937_RS04630	0.35	+0.4
1,021,379	+		DDA3937_RS04630	0.35	-0.2
1,021,380	-		DDA3937_RS04630	0.35	-0.8
1,021,380	-		DDA3937_RS04630	0.35	-0.2
1,021,424	+		DDA3937_RS04630	0.39	-0.0
1,021,424	+		DDA3937_RS04630	0.39	-0.3
1,021,424	+		DDA3937_RS04630	0.39	-0.6
1,021,425	-		DDA3937_RS04630	0.39	-0.1
1,021,425	-		DDA3937_RS04630	0.39	-1.0
1,021,425	-		DDA3937_RS04630	0.39	-0.8
1,021,425	-		DDA3937_RS04630	0.39	-0.2
1,021,425	-		DDA3937_RS04630	0.39	-0.7
1,021,440	+		DDA3937_RS04630	0.40	+0.9
1,021,440	+		DDA3937_RS04630	0.40	+0.1
1,021,440	+		DDA3937_RS04630	0.40	+0.4
1,021,441	-		DDA3937_RS04630	0.40	+0.1
1,021,441	-		DDA3937_RS04630	0.40	+0.1
1,021,441	-		DDA3937_RS04630	0.40	-0.6
1,021,441	-		DDA3937_RS04630	0.40	-0.8
1,021,441	-		DDA3937_RS04630	0.40	+0.5
1,021,487	-		DDA3937_RS04630	0.44	-0.1
1,021,534	+		DDA3937_RS04630	0.47	-0.6
1,021,534	+				+0.7
1,021,534	+		DDA3937_RS04630	0.47	-0.3
1,021,539	-		DDA3937_RS04630	0.48	-0.8
1,021,539	-		DDA3937_RS04630	0.48	+0.3
1,021,554	+		DDA3937_RS04630	0.49	+0.2
1,021,757	+		DDA3937_RS04630	0.65	-1.3
1,021,763	-		DDA3937_RS04630	0.65	+0.0
1,021,765	-		DDA3937_RS04630	0.65	+0.6