Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13050

Experiment: 7.5mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7.5mM_PTB
2,979,741	-				-0.3
2,979,744	+				+0.0
2,979,744	+				-1.0
2,979,744	+				-1.1
2,979,745	-				-0.4
2,979,766	-				-0.3
2,979,805	+				-1.1
2,979,806	-				+0.4
2,979,806	-				-2.0
2,979,807	+				-0.4
2,979,807	+				-0.9
2,979,808	-				+0.5
2,979,827	+				-0.1
2,979,827	+				-1.4
2,979,827	+				+0.2
2,979,828	-				-1.3
2,979,828	-				-0.5
2,979,828	-				+0.1
2,979,828	-				+0.0
2,979,828	-				+0.5
2,979,828	-				-0.6
2,979,828	-				+0.3
2,979,828	-				-0.5
2,979,828	-				+0.1
2,979,828	-				-0.4
2,979,828	-				-1.0
2,979,857	+				-0.7
2,979,867	+				-0.3
2,979,895	+				-0.1
2,979,899	+				+0.6
2,979,900	-				+0.0
2,979,993	-				+0.4
2,979,994	+				-1.0
2,979,994	+				+0.6
2,979,995	-				-0.6
2,980,001	+				+0.9
2,980,002	-				+1.1
2,980,002	-				+1.2
2,980,002	-				-0.1
2,980,002	-				+0.8
2,980,004	-				+0.1
2,980,008	-				+0.9
2,980,067	+				-1.9
2,980,069	+				-0.3
2,980,070	-				-0.5
2,980,127	+				-0.7
2,980,140	-		DDA3937_RS13045	0.11	-0.6
2,980,172	-		DDA3937_RS13045	0.17	+0.9
2,980,172	-				-0.6
2,980,174	+		DDA3937_RS13045	0.17	+0.9
2,980,175	-		DDA3937_RS13045	0.17	+0.2
2,980,175	-		DDA3937_RS13045	0.17	-2.0
2,980,236	+		DDA3937_RS13045	0.29	-0.2
2,980,236	+		DDA3937_RS13045	0.29	-0.1
2,980,236	+		DDA3937_RS13045	0.29	-0.6
2,980,236	+		DDA3937_RS13045	0.29	+0.1
2,980,236	+		DDA3937_RS13045	0.29	+0.2
2,980,236	+		DDA3937_RS13045	0.29	+0.8
2,980,236	+		DDA3937_RS13045	0.29	+0.1
2,980,237	-		DDA3937_RS13045	0.29	+0.2
2,980,237	-		DDA3937_RS13045	0.29	-0.9
2,980,237	-		DDA3937_RS13045	0.29	+0.6
2,980,237	-		DDA3937_RS13045	0.29	+0.2
2,980,237	-		DDA3937_RS13045	0.29	+0.2
2,980,237	-		DDA3937_RS13045	0.29	-2.2
2,980,241	+		DDA3937_RS13045	0.30	+0.3
2,980,241	+		DDA3937_RS13045	0.30	+0.3
2,980,242	-		DDA3937_RS13045	0.30	-1.4
2,980,242	-		DDA3937_RS13045	0.30	+2.2
2,980,242	-		DDA3937_RS13045	0.30	+0.3
2,980,242	-		DDA3937_RS13045	0.30	+0.6
2,980,242	-		DDA3937_RS13045	0.30	-0.2
2,980,276	-		DDA3937_RS13045	0.36	+0.6
2,980,300	+		DDA3937_RS13045	0.41	-0.3
2,980,301	-		DDA3937_RS13045	0.41	+0.0
2,980,301	-		DDA3937_RS13045	0.41	-1.7
2,980,301	-		DDA3937_RS13045	0.41	+0.1
2,980,331	+		DDA3937_RS13045	0.46	+0.3
2,980,376	+		DDA3937_RS13045	0.55	+0.2
2,980,520	+		DDA3937_RS13045	0.81	+0.0
2,980,520	+		DDA3937_RS13045	0.81	-0.2
2,980,520	+		DDA3937_RS13045	0.81	-0.6
2,980,520	+		DDA3937_RS13045	0.81	-0.1
2,980,520	+		DDA3937_RS13045	0.81	+1.2
2,980,521	-		DDA3937_RS13045	0.81	-0.2
2,980,521	-		DDA3937_RS13045	0.81	-0.4
2,980,521	-		DDA3937_RS13045	0.81	+0.8
2,980,521	-		DDA3937_RS13045	0.81	-2.2
2,980,521	-		DDA3937_RS13045	0.81	-0.2
2,980,522	+		DDA3937_RS13045	0.81	+0.5
2,980,522	+		DDA3937_RS13045	0.81	-0.7
2,980,522	+		DDA3937_RS13045	0.81	-0.1
2,980,522	+		DDA3937_RS13045	0.81	-0.1
2,980,522	+		DDA3937_RS13045	0.81	-0.0
2,980,522	+		DDA3937_RS13045	0.81	-1.0
2,980,522	+		DDA3937_RS13045	0.81	-1.3
2,980,523	-		DDA3937_RS13045	0.82	-0.2
2,980,523	-		DDA3937_RS13045	0.82	+0.8
2,980,523	-		DDA3937_RS13045	0.82	+0.2
2,980,523	-		DDA3937_RS13045	0.82	-0.2
2,980,523	-		DDA3937_RS13045	0.82	-1.0
2,980,523	-		DDA3937_RS13045	0.82	-0.3
2,980,523	-		DDA3937_RS13045	0.82	+0.6
2,980,523	-		DDA3937_RS13045	0.82	+0.5
2,980,523	-		DDA3937_RS13045	0.82	-0.6
2,980,523	-		DDA3937_RS13045	0.82	+0.1
2,980,612	+				-0.8
2,980,613	-				+0.6
2,980,613	-				-2.4
2,980,647	+				+0.1
2,980,647	+				-0.4
2,980,648	-				+0.3
2,980,648	-				+0.4
2,980,659	+				+1.2
2,980,773	+		DDA3937_RS13050	0.11	+0.6
2,980,773	+				+0.8
2,980,774	-		DDA3937_RS13050	0.11	+0.0
2,980,774	-		DDA3937_RS13050	0.11	+0.2
2,980,774	-		DDA3937_RS13050	0.11	+0.6
2,980,847	-		DDA3937_RS13050	0.18	+0.1
2,980,998	+		DDA3937_RS13050	0.33	+1.2
2,980,999	-		DDA3937_RS13050	0.33	-0.1
2,980,999	-		DDA3937_RS13050	0.33	+1.6
2,981,037	+		DDA3937_RS13050	0.37	+0.1
2,981,038	-		DDA3937_RS13050	0.37	-0.6
2,981,038	-		DDA3937_RS13050	0.37	-1.2
2,981,227	+		DDA3937_RS13050	0.55	+0.2
2,981,459	-		DDA3937_RS13050	0.78	-0.4
2,981,666	+				-0.4
2,981,666	+				-2.0
2,981,666	+				-1.9
2,981,666	+				+0.6
2,981,667	-				-1.7
2,981,698	+				-0.9
2,981,699	-				+0.4
2,981,699	-				+0.8
2,981,699	-				+1.1
2,981,699	-				+0.8
2,981,699	-				+0.5
2,981,705	-				-0.0
2,981,705	-				+0.7
2,981,705	-				-0.3
2,981,708	-				+0.3
2,981,708	-				+1.0
2,981,849	+				-2.3
2,981,850	-				-0.2
2,981,900	+		DDA3937_RS13055	0.12	-2.1
2,981,976	-		DDA3937_RS13055	0.21	-0.6
2,981,976	-		DDA3937_RS13055	0.21	-1.4
2,982,102	+		DDA3937_RS13055	0.35	+0.2
2,982,228	+		DDA3937_RS13055	0.50	-0.7
2,982,229	-		DDA3937_RS13055	0.50	+1.1
2,982,229	-		DDA3937_RS13055	0.50	-0.4
2,982,229	-		DDA3937_RS13055	0.50	-0.1
2,982,229	-		DDA3937_RS13055	0.50	+0.0
2,982,577	+				-0.0
2,982,577	+				-0.1
2,982,578	-				-0.4
2,982,578	-				-1.6
2,982,655	+				+0.2