Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15850

Experiment: 7.5mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7.5mM_PTB
3,622,689	+				-2.9
3,622,689	+				-0.6
3,622,689	+				-1.3
3,622,689	+				-0.3
3,622,690	-				-0.2
3,622,690	-				+0.0
3,622,690	-				-0.6
3,622,690	-				-0.3
3,622,690	-				+0.3
3,622,690	-				-1.1
3,622,744	+				-0.2
3,622,745	-				-1.3
3,622,767	+				-1.2
3,622,768	-				+0.9
3,622,768	-				-0.1
3,622,768	-				-0.6
3,622,769	+				-0.5
3,622,769	+				+2.0
3,622,769	+				-0.9
3,622,769	+				-1.1
3,622,770	-				+0.5
3,622,770	-				-0.6
3,622,783	+				+0.4
3,622,783	+				-0.5
3,622,783	+				-2.0
3,622,784	-				-0.2
3,622,784	-				-0.7
3,622,784	-				+0.2
3,622,866	+		DDA3937_RS15845	0.12	-1.2
3,622,866	+		DDA3937_RS15845	0.12	-0.2
3,622,866	+		DDA3937_RS15845	0.12	-0.9
3,622,867	-		DDA3937_RS15845	0.12	-1.0
3,622,867	-		DDA3937_RS15845	0.12	-2.2
3,622,872	+		DDA3937_RS15845	0.13	+0.0
3,622,956	+		DDA3937_RS15845	0.23	-0.3
3,623,178	+		DDA3937_RS15845	0.51	-0.4
3,623,178	+		DDA3937_RS15845	0.51	-0.9
3,623,226	+		DDA3937_RS15845	0.57	-0.9
3,623,227	-		DDA3937_RS15845	0.57	-0.4
3,623,317	+		DDA3937_RS15845	0.68	-0.7
3,623,317	+		DDA3937_RS15845	0.68	-1.2
3,623,317	+		DDA3937_RS15845	0.68	-0.8
3,623,317	+		DDA3937_RS15845	0.68	-0.2
3,623,317	+		DDA3937_RS15845	0.68	-0.6
3,623,317	+		DDA3937_RS15845	0.68	-3.2
3,623,318	-		DDA3937_RS15845	0.68	-1.3
3,623,318	-		DDA3937_RS15845	0.68	-0.8
3,623,318	-		DDA3937_RS15845	0.68	-1.3
3,623,318	-		DDA3937_RS15845	0.68	-1.2
3,623,318	-		DDA3937_RS15845	0.68	-1.0
3,623,319	+		DDA3937_RS15845	0.68	-0.1
3,623,320	-		DDA3937_RS15845	0.68	-0.6
3,623,320	-		DDA3937_RS15845	0.68	+0.7
3,623,320	-		DDA3937_RS15845	0.68	-0.2
3,623,396	+		DDA3937_RS15845	0.77	-1.1
3,623,396	+		DDA3937_RS15845	0.77	+1.0
3,623,414	+		DDA3937_RS15845	0.80	-0.6
3,623,414	+		DDA3937_RS15845	0.80	-0.6
3,623,428	+		DDA3937_RS15845	0.81	-0.6
3,623,470	-		DDA3937_RS15845	0.87	-0.6
3,623,514	+				-2.3
3,623,514	+				-0.5
3,623,514	+				+0.4
3,623,514	+				-0.1
3,623,515	-				-1.7
3,623,518	+				-1.3
3,623,518	+				-0.9
3,623,518	+				+0.2
3,623,518	+				+0.0
3,623,518	+				-0.1
3,623,518	+				+0.0
3,623,518	+				-1.2
3,623,519	-				-0.8
3,623,519	-				-0.4
3,623,519	-				-1.8
3,623,519	-				+0.0
3,623,519	-				+0.9
3,623,525	-				-0.3
3,623,566	+				-1.7
3,623,567	-				-0.7
3,623,578	+				-0.2
3,623,578	+				+1.5
3,623,578	+				+0.0
3,623,579	-				-0.4
3,623,579	-				+0.2
3,623,579	-				+0.3
3,623,579	-				-1.3
3,623,579	-				+0.0
3,623,579	-				-1.5
3,623,579	-				-1.0
3,623,579	-				-0.7
3,623,669	+				-0.5
3,623,670	-				-0.3
3,623,670	-				-0.2
3,623,676	+				+0.3
3,623,676	+				-1.9
3,623,676	+				-2.5
3,623,676	+				+0.3
3,623,676	+				+0.2
3,623,676	+				+1.3
3,623,676	+				-0.1
3,623,677	-				-1.6
3,623,677	-				-0.8
3,623,677	-				-0.6
3,623,677	-				-0.5
3,623,677	-				-0.2
3,623,677	-				-0.5
3,623,677	-				-0.6
3,623,681	-				-0.3
3,623,681	-				+0.2
3,623,681	-				-0.4
3,623,698	+				-0.7
3,623,698	+				-1.8
3,623,698	+				-0.8
3,623,698	+				-0.5
3,623,699	-				-1.3
3,623,699	-				-0.4
3,623,699	-				-1.2
3,623,803	+		DDA3937_RS15850	0.13	-1.8
3,623,803	+		DDA3937_RS15850	0.13	+0.6
3,623,857	+		DDA3937_RS15850	0.18	+0.1
3,623,857	+		DDA3937_RS15850	0.18	-1.3
3,623,857	+		DDA3937_RS15850	0.18	-1.5
3,623,857	+		DDA3937_RS15850	0.18	-1.3
3,623,858	-		DDA3937_RS15850	0.18	-3.2
3,623,858	-		DDA3937_RS15850	0.18	-1.8
3,623,858	-		DDA3937_RS15850	0.18	+0.7
3,623,858	-		DDA3937_RS15850	0.18	-1.7
3,623,858	-		DDA3937_RS15850	0.18	-1.6
3,623,858	-		DDA3937_RS15850	0.18	-0.9
3,623,858	-		DDA3937_RS15850	0.18	-0.5
3,623,858	-		DDA3937_RS15850	0.18	-1.5
3,623,877	+		DDA3937_RS15850	0.20	+0.0
3,623,877	+		DDA3937_RS15850	0.20	-0.3
3,623,877	+		DDA3937_RS15850	0.20	-1.5
3,623,877	+		DDA3937_RS15850	0.20	-0.8
3,623,878	-		DDA3937_RS15850	0.20	-0.8
3,623,878	-		DDA3937_RS15850	0.20	-0.4
3,623,883	+		DDA3937_RS15850	0.21	-1.6
3,623,884	-		DDA3937_RS15850	0.21	-1.2
3,623,884	-		DDA3937_RS15850	0.21	-0.3
3,623,884	-		DDA3937_RS15850	0.21	-0.6
3,623,884	-		DDA3937_RS15850	0.21	+0.0
3,623,884	-		DDA3937_RS15850	0.21	-0.9
3,623,884	-		DDA3937_RS15850	0.21	-1.1
3,623,893	-		DDA3937_RS15850	0.22	-1.0
3,623,893	-		DDA3937_RS15850	0.22	-1.4
3,623,930	+		DDA3937_RS15850	0.25	-1.6
3,623,931	-		DDA3937_RS15850	0.25	-0.8
3,623,931	-		DDA3937_RS15850	0.25	-0.6
3,623,931	-		DDA3937_RS15850	0.25	-0.0
3,623,984	-		DDA3937_RS15850	0.31	-0.3
3,624,027	+		DDA3937_RS15850	0.35	-0.5
3,624,028	-		DDA3937_RS15850	0.35	+0.5
3,624,028	-		DDA3937_RS15850	0.35	-0.3
3,624,028	-		DDA3937_RS15850	0.35	-0.9
3,624,028	-		DDA3937_RS15850	0.35	-1.1
3,624,028	-		DDA3937_RS15850	0.35	-0.4
3,624,028	-		DDA3937_RS15850	0.35	-1.4
3,624,028	-		DDA3937_RS15850	0.35	-1.8
3,624,129	+		DDA3937_RS15850	0.45	-0.8
3,624,130	-		DDA3937_RS15850	0.45	-0.6
3,624,130	-		DDA3937_RS15850	0.45	+0.6
3,624,130	-		DDA3937_RS15850	0.45	-1.8
3,624,189	+		DDA3937_RS15850	0.51	-1.7
3,624,190	-		DDA3937_RS15850	0.51	-1.0
3,624,190	-		DDA3937_RS15850	0.51	-0.9
3,624,257	+		DDA3937_RS15850	0.58	-0.5
3,624,258	-		DDA3937_RS15850	0.58	-1.0
3,624,258	-		DDA3937_RS15850	0.58	-1.5
3,624,290	-		DDA3937_RS15850	0.61	-0.5
3,624,290	-		DDA3937_RS15850	0.61	-1.4
3,624,290	-		DDA3937_RS15850	0.61	-2.2
3,624,292	+		DDA3937_RS15850	0.61	-0.6
3,624,292	+		DDA3937_RS15850	0.61	-1.8
3,624,292	+		DDA3937_RS15850	0.61	+0.8
3,624,292	+		DDA3937_RS15850	0.61	-0.9
3,624,292	+		DDA3937_RS15850	0.61	-1.1
3,624,293	-		DDA3937_RS15850	0.61	-1.2
3,624,293	-		DDA3937_RS15850	0.61	-1.3
3,624,293	-		DDA3937_RS15850	0.61	-0.8
3,624,293	-		DDA3937_RS15850	0.61	-1.5
3,624,293	-		DDA3937_RS15850	0.61	-1.3
3,624,310	+		DDA3937_RS15850	0.63	-0.4
3,624,310	+		DDA3937_RS15850	0.63	-0.9
3,624,311	-		DDA3937_RS15850	0.63	-3.0
3,624,337	+		DDA3937_RS15850	0.65	+0.2
3,624,337	+		DDA3937_RS15850	0.65	-1.5
3,624,337	+		DDA3937_RS15850	0.65	+0.1
3,624,337	+		DDA3937_RS15850	0.65	-1.8
3,624,338	-		DDA3937_RS15850	0.66	-0.9
3,624,338	-		DDA3937_RS15850	0.66	-1.1
3,624,338	-		DDA3937_RS15850	0.66	-1.8
3,624,338	-		DDA3937_RS15850	0.66	-0.3
3,624,338	-		DDA3937_RS15850	0.66	-1.2
3,624,338	-		DDA3937_RS15850	0.66	+0.2
3,624,338	-		DDA3937_RS15850	0.66	-1.5
3,624,339	+		DDA3937_RS15850	0.66	-1.0
3,624,340	-		DDA3937_RS15850	0.66	-1.2
3,624,340	-		DDA3937_RS15850	0.66	-0.8
3,624,559	+		DDA3937_RS15850	0.87	-1.3
3,624,561	+		DDA3937_RS15850	0.88	-1.2
3,624,561	+		DDA3937_RS15850	0.88	-0.6
3,624,561	+		DDA3937_RS15850	0.88	+0.0
3,624,561	+		DDA3937_RS15850	0.88	-0.6
3,624,562	-		DDA3937_RS15850	0.88	+0.6
3,624,562	-		DDA3937_RS15850	0.88	-2.7
3,624,562	-		DDA3937_RS15850	0.88	-1.7
3,624,562	-		DDA3937_RS15850	0.88	-1.6
3,624,562	-		DDA3937_RS15850	0.88	-0.6
3,624,562	-		DDA3937_RS15850	0.88	-0.5
3,624,562	-		DDA3937_RS15850	0.88	-1.7
3,624,562	-		DDA3937_RS15850	0.88	+0.5
3,624,571	-		DDA3937_RS15850	0.89	+0.4
3,624,591	+				-0.6
3,624,591	+				+0.4
3,624,591	+				-2.8
3,624,592	-				-1.2
3,624,592	-				-1.2
3,624,592	-				-0.6
3,624,639	-				-1.5
3,624,686	+				-2.6
3,624,686	+				-1.1
3,624,686	+				-0.5
3,624,686	+				+0.6
3,624,687	-				+0.4
3,624,687	-				-1.8
3,624,687	-				-0.7
3,624,687	-				-2.4
3,624,687	-				+0.4
3,624,687	-				-0.4
3,624,687	-				+0.6
3,624,689	+				-0.2
3,624,689	+				-0.1
3,624,689	+				-0.7
3,624,689	+				-1.0
3,624,689	+				-0.5
3,624,690	-				-1.0
3,624,690	-				+0.1
3,624,690	-				-1.6
3,624,690	-				-0.6
3,624,690	-				-0.7
3,624,690	-				-0.7
3,624,690	-				-1.2
3,624,692	+				-0.1
3,624,692	+				+0.5
3,624,693	-				-0.9
3,624,693	-				-0.7
3,624,693	-				-1.1
3,624,829	+				-1.1
3,624,829	+				-2.2
3,624,847	+				-1.1
3,624,847	+				+0.3
3,624,847	+				-0.8
3,624,847	+				-3.0
3,624,847	+				-1.0
3,624,848	-				-1.6
3,624,848	-				-0.4
3,624,848	-				-1.6
3,624,848	-				-2.0
3,624,893	+				-0.5
3,624,894	-				-0.6
3,624,906	+				-0.6
3,624,906	+				-0.1
3,624,907	-				-0.9
3,624,907	-				-1.6
3,624,907	-				+1.0
3,624,909	+				-0.8
3,624,910	-				+1.3
3,624,938	+				-0.6
3,624,943	+				+1.3
3,624,987	+				+1.0
3,624,988	-				-1.2
3,624,988	-				+0.7
3,624,988	-				+0.0
3,625,017	+				-0.3
3,625,017	+				+1.6
3,625,017	+				-0.7
3,625,018	-				-1.0
3,625,018	-				+0.4
3,625,018	-				+0.2
3,625,071	-				-0.4
3,625,079	+				+0.2
3,625,096	+				+0.4
3,625,097	-				+0.3
3,625,169	-				-0.2
3,625,169	-		DDA3937_RS15855	0.16	+0.2
3,625,220	+		DDA3937_RS15855	0.20	-0.5
3,625,220	+		DDA3937_RS15855	0.20	+0.0
3,625,293	+		DDA3937_RS15855	0.27	-1.2
3,625,293	+		DDA3937_RS15855	0.27	+0.4
3,625,293	+		DDA3937_RS15855	0.27	+0.5
3,625,293	+		DDA3937_RS15855	0.27	-0.6
3,625,294	-		DDA3937_RS15855	0.27	-1.0
3,625,294	-		DDA3937_RS15855	0.27	-0.8
3,625,386	+		DDA3937_RS15855	0.35	-0.1
3,625,386	+		DDA3937_RS15855	0.35	+0.8
3,625,387	-		DDA3937_RS15855	0.35	+0.2
3,625,387	-		DDA3937_RS15855	0.35	-0.6
3,625,387	-		DDA3937_RS15855	0.35	-0.7
3,625,387	-		DDA3937_RS15855	0.35	+0.9
3,625,387	-		DDA3937_RS15855	0.35	-0.6
3,625,589	+		DDA3937_RS15855	0.52	-0.4
3,625,589	+		DDA3937_RS15855	0.52	-0.3
3,625,589	+		DDA3937_RS15855	0.52	-0.2
3,625,589	+		DDA3937_RS15855	0.52	-0.9
3,625,589	+		DDA3937_RS15855	0.52	+0.0
3,625,590	-		DDA3937_RS15855	0.52	-1.6
3,625,590	-		DDA3937_RS15855	0.52	-1.0