Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07135

Experiment: 7.5mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7.5mM_PTB
1,605,114	+		DDA3937_RS07130	0.33	+0.1
1,605,115	-		DDA3937_RS07130	0.33	-1.5
1,605,115	-		DDA3937_RS07130	0.33	+0.1
1,605,115	-		DDA3937_RS07130	0.33	-0.4
1,605,115	-		DDA3937_RS07130	0.33	-0.7
1,605,335	+		DDA3937_RS07130	0.50	-0.4
1,605,524	-		DDA3937_RS07130	0.64	+0.6
1,605,662	-		DDA3937_RS07130	0.75	-0.1
1,605,773	-		DDA3937_RS07130	0.83	-0.2
1,605,789	+		DDA3937_RS07130	0.85	+0.1
1,605,803	+		DDA3937_RS07130	0.86	+0.0
1,605,803	+		DDA3937_RS07130	0.86	+0.5
1,605,804	-		DDA3937_RS07130	0.86	+0.6
1,605,804	-		DDA3937_RS07130	0.86	-0.5
1,605,804	-		DDA3937_RS07130	0.86	-0.1
1,605,804	-		DDA3937_RS07130	0.86	-0.8
1,605,804	-		DDA3937_RS07130	0.86	+1.2
1,605,807	+		DDA3937_RS07130	0.86	-0.6
1,605,898	+				+0.1
1,605,898	+				+0.2
1,605,898	+				-0.7
1,605,898	+				+0.3
1,605,898	+				+0.2
1,605,898	+				-0.2
1,605,898	+				-1.5
1,605,898	+				+0.4
1,605,899	-				-0.2
1,605,899	-				+0.5
1,605,899	-				-1.4
1,605,922	+				+0.6
1,605,923	-				-0.3
1,606,052	-				+1.1
1,606,127	+		DDA3937_RS07135	0.38	-0.4
1,606,128	-		DDA3937_RS07135	0.38	-0.2
1,606,128	-		DDA3937_RS07135	0.38	+0.6
1,606,154	+		DDA3937_RS07135	0.50	-1.3
1,606,154	+		DDA3937_RS07135	0.50	-0.1
1,606,175	+		DDA3937_RS07135	0.59	-0.6
1,606,281	+				-0.5
1,606,419	+				-1.1
1,606,492	+				-0.1
1,606,493	-				+0.1
1,606,504	+				+0.6
1,606,504	+				-1.3
1,606,505	-				-0.7
1,606,512	+				-0.1
1,606,653	+		DDA3937_RS07140	0.16	-0.4
1,606,653	+		DDA3937_RS07140	0.16	-0.7
1,606,653	+		DDA3937_RS07140	0.16	+0.8
1,606,653	+		DDA3937_RS07140	0.16	+0.9
1,606,653	+		DDA3937_RS07140	0.16	-0.1
1,606,654	-		DDA3937_RS07140	0.16	-0.2
1,606,656	+		DDA3937_RS07140	0.16	-0.7
1,606,656	+		DDA3937_RS07140	0.16	-0.4
1,606,656	+		DDA3937_RS07140	0.16	-0.4
1,606,657	-		DDA3937_RS07140	0.16	-1.9
1,606,657	-		DDA3937_RS07140	0.16	-0.7
1,606,657	-		DDA3937_RS07140	0.16	-0.6
1,606,666	+		DDA3937_RS07140	0.16	-0.6
1,606,666	+		DDA3937_RS07140	0.16	-0.8
1,606,667	-		DDA3937_RS07140	0.17	+2.6
1,606,667	-		DDA3937_RS07140	0.17	-0.3
1,606,667	-		DDA3937_RS07140	0.17	+0.6
1,606,668	+		DDA3937_RS07140	0.17	-0.9
1,606,668	+		DDA3937_RS07140	0.17	-0.2
1,606,668	+		DDA3937_RS07140	0.17	-1.0
1,606,668	+		DDA3937_RS07140	0.17	+0.3
1,606,668	+		DDA3937_RS07140	0.17	-1.0
1,606,668	+		DDA3937_RS07140	0.17	-0.3
1,606,669	-		DDA3937_RS07140	0.17	-0.3
1,606,669	-		DDA3937_RS07140	0.17	+0.1
1,606,669	-		DDA3937_RS07140	0.17	-0.7
1,606,669	-		DDA3937_RS07140	0.17	-1.7
1,606,669	-		DDA3937_RS07140	0.17	-1.1
1,606,669	-		DDA3937_RS07140	0.17	-0.5
1,606,669	-		DDA3937_RS07140	0.17	-1.5
1,606,764	+		DDA3937_RS07140	0.23	-1.7
1,606,817	-		DDA3937_RS07140	0.26	+0.2
1,606,891	+		DDA3937_RS07140	0.31	+0.5
1,606,891	+		DDA3937_RS07140	0.31	+0.6
1,606,891	+		DDA3937_RS07140	0.31	-0.9
1,606,891	+		DDA3937_RS07140	0.31	-0.4
1,606,891	+		DDA3937_RS07140	0.31	-0.5
1,606,892	-		DDA3937_RS07140	0.31	-1.0
1,606,892	-		DDA3937_RS07140	0.31	-0.1
1,607,027	+		DDA3937_RS07140	0.40	-1.7
1,607,027	+		DDA3937_RS07140	0.40	-0.4
1,607,027	+		DDA3937_RS07140	0.40	-2.1
1,607,027	+		DDA3937_RS07140	0.40	-1.1
1,607,027	+		DDA3937_RS07140	0.40	-1.4
1,607,028	-		DDA3937_RS07140	0.41	-0.7
1,607,046	+		DDA3937_RS07140	0.42	-0.1
1,607,046	+		DDA3937_RS07140	0.42	-0.8
1,607,046	+		DDA3937_RS07140	0.42	-2.3
1,607,067	+		DDA3937_RS07140	0.43	-1.6
1,607,067	+		DDA3937_RS07140	0.43	-0.9
1,607,067	+		DDA3937_RS07140	0.43	-0.1
1,607,068	-		DDA3937_RS07140	0.43	-1.2
1,607,068	-		DDA3937_RS07140	0.43	-0.1
1,607,068	-		DDA3937_RS07140	0.43	+0.1
1,607,068	-		DDA3937_RS07140	0.43	+0.3
1,607,068	-		DDA3937_RS07140	0.43	-1.2
1,607,068	-		DDA3937_RS07140	0.43	-0.9
1,607,068	-		DDA3937_RS07140	0.43	-0.0
1,607,079	+		DDA3937_RS07140	0.44	-0.6
1,607,079	+		DDA3937_RS07140	0.44	+0.2
1,607,079	+		DDA3937_RS07140	0.44	-0.9
1,607,079	+		DDA3937_RS07140	0.44	+0.9
1,607,079	+		DDA3937_RS07140	0.44	-0.5
1,607,079	+		DDA3937_RS07140	0.44	-0.4
1,607,080	-		DDA3937_RS07140	0.44	-0.2
1,607,080	-		DDA3937_RS07140	0.44	-0.9
1,607,080	-		DDA3937_RS07140	0.44	-1.1
1,607,094	+		DDA3937_RS07140	0.45	-0.9
1,607,094	+		DDA3937_RS07140	0.45	-2.8
1,607,094	+		DDA3937_RS07140	0.45	+1.6
1,607,094	+		DDA3937_RS07140	0.45	+1.6
1,607,094	+		DDA3937_RS07140	0.45	+0.2
1,607,094	+		DDA3937_RS07140	0.45	+0.1
1,607,095	-		DDA3937_RS07140	0.45	+0.6
1,607,095	-		DDA3937_RS07140	0.45	-0.1
1,607,095	-		DDA3937_RS07140	0.45	+0.1
1,607,095	-		DDA3937_RS07140	0.45	-0.7
1,607,095	-		DDA3937_RS07140	0.45	-0.8
1,607,095	-		DDA3937_RS07140	0.45	-0.8
1,607,095	-		DDA3937_RS07140	0.45	-1.1
1,607,097	+		DDA3937_RS07140	0.45	-1.0
1,607,097	+		DDA3937_RS07140	0.45	-0.0
1,607,097	+		DDA3937_RS07140	0.45	+0.9
1,607,097	+		DDA3937_RS07140	0.45	-0.9
1,607,097	+		DDA3937_RS07140	0.45	-0.2
1,607,097	+		DDA3937_RS07140	0.45	-1.3
1,607,098	-		DDA3937_RS07140	0.45	-2.4
1,607,098	-		DDA3937_RS07140	0.45	+0.1
1,607,098	-		DDA3937_RS07140	0.45	-0.9
1,607,098	-		DDA3937_RS07140	0.45	+0.0
1,607,132	+		DDA3937_RS07140	0.47	-0.4
1,607,132	+		DDA3937_RS07140	0.47	-0.7
1,607,132	+		DDA3937_RS07140	0.47	-1.4
1,607,132	+		DDA3937_RS07140	0.47	-0.5
1,607,132	+		DDA3937_RS07140	0.47	-0.4
1,607,133	-		DDA3937_RS07140	0.47	-0.3