Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06445

Experiment: 7.5mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7.5mM_PTB
1,438,117	-				-0.1
1,438,117	-				+0.7
1,438,117	-				-1.6
1,438,229	-				+0.1
1,438,255	-				-0.9
1,438,257	+				-0.3
1,438,295	-				-0.3
1,438,295	-				+0.2
1,438,336	-				+0.4
1,438,362	-				-0.3
1,438,362	-				+0.1
1,438,404	-				+1.7
1,438,413	+				-0.2
1,438,414	-				+0.7
1,438,414	-				-0.1
1,438,436	-				-0.0
1,438,472	+				+0.6
1,438,472	+				+0.4
1,438,473	-				+1.0
1,438,473	-				+0.3
1,438,483	+				+0.4
1,438,483	+				+1.1
1,438,483	+				+0.7
1,438,483	+				+0.6
1,438,483	+				+0.6
1,438,483	+				+1.2
1,438,484	-				+0.4
1,438,484	-				+1.0
1,438,484	-				+1.7
1,438,486	+				-0.4
1,438,487	-				+0.8
1,438,503	+				+1.4
1,438,503	+				+1.0
1,438,503	+				+1.0
1,438,503	+				+0.6
1,438,503	+				+1.3
1,438,503	+				+1.0
1,438,504	-				+0.5
1,438,504	-				+1.4
1,438,504	-				+0.4
1,438,504	-				+0.6
1,438,504	-				+0.9
1,438,504	-				+0.6
1,438,505	+				+1.1
1,438,528	-				-0.1
1,438,538	-				+0.7
1,438,538	-				+1.0
1,438,581	+				+0.9
1,438,760	+		DDA3937_RS06440	0.21	+1.4
1,438,761	-		DDA3937_RS06440	0.21	+0.9
1,438,761	-		DDA3937_RS06440	0.21	+0.2
1,438,787	+		DDA3937_RS06440	0.27	+1.4
1,438,787	+		DDA3937_RS06440	0.27	+1.1
1,438,787	+		DDA3937_RS06440	0.27	+0.5
1,438,788	-		DDA3937_RS06440	0.28	+0.7
1,438,788	-		DDA3937_RS06440	0.28	+0.7
1,438,788	-		DDA3937_RS06440	0.28	+0.9
1,438,788	-		DDA3937_RS06440	0.28	+1.2
1,438,806	-		DDA3937_RS06440	0.32	+1.1
1,438,926	+		DDA3937_RS06440	0.63	+0.5
1,438,931	+		DDA3937_RS06440	0.64	+0.2
1,438,931	+		DDA3937_RS06440	0.64	-1.1
1,438,931	+		DDA3937_RS06440	0.64	+1.1
1,438,931	+		DDA3937_RS06440	0.64	+0.5
1,438,931	+		DDA3937_RS06440	0.64	-0.6
1,438,931	+		DDA3937_RS06440	0.64	+0.9
1,438,931	+		DDA3937_RS06440	0.64	+0.7
1,438,931	+		DDA3937_RS06440	0.64	+0.4
1,438,931	+		DDA3937_RS06440	0.64	+0.6
1,438,931	+		DDA3937_RS06440	0.64	+0.5
1,438,931	+		DDA3937_RS06440	0.64	+0.3
1,438,931	+				-0.0
1,438,931	+		DDA3937_RS06440	0.64	+0.7
1,438,931	+		DDA3937_RS06440	0.64	+0.5
1,438,931	+		DDA3937_RS06440	0.64	+0.3
1,438,931	+		DDA3937_RS06440	0.64	+1.8
1,438,932	-		DDA3937_RS06440	0.65	+0.8
1,438,932	-		DDA3937_RS06440	0.65	+1.4
1,438,932	-		DDA3937_RS06440	0.65	-0.0
1,438,932	-		DDA3937_RS06440	0.65	+1.0
1,438,936	+		DDA3937_RS06440	0.66	-0.2
1,438,936	+		DDA3937_RS06440	0.66	+1.0
1,438,936	+		DDA3937_RS06440	0.66	-0.0
1,438,937	-		DDA3937_RS06440	0.66	+0.4
1,438,937	-		DDA3937_RS06440	0.66	+1.0
1,438,971	+		DDA3937_RS06440	0.75	+0.6
1,439,024	+		DDA3937_RS06440	0.88	+0.6
1,439,025	-		DDA3937_RS06440	0.88	+0.7
1,439,025	-		DDA3937_RS06440	0.88	+1.2
1,439,025	-		DDA3937_RS06440	0.88	+1.0
1,439,027	+		DDA3937_RS06440	0.89	+0.3
1,439,027	+		DDA3937_RS06440	0.89	+0.6
1,439,027	+		DDA3937_RS06440	0.89	+1.1
1,439,027	+		DDA3937_RS06440	0.89	+0.5
1,439,027	+		DDA3937_RS06440	0.89	+0.3
1,439,028	-		DDA3937_RS06440	0.89	+1.1
1,439,062	+				+0.7
1,439,063	-				+0.8
1,439,067	+				+0.5
1,439,067	+				+0.9
1,439,067	+				+0.5
1,439,067	+				+0.4
1,439,068	-				+0.7
1,439,068	-				+0.2
1,439,092	+				+0.8
1,439,092	+				+1.0
1,439,093	-				+0.6
1,439,100	+		DDA3937_RS06445	0.11	+1.0
1,439,100	+		DDA3937_RS06445	0.11	+1.7
1,439,115	+		DDA3937_RS06445	0.15	+0.4
1,439,115	+		DDA3937_RS06445	0.15	+1.5
1,439,115	+		DDA3937_RS06445	0.15	+1.0
1,439,115	+		DDA3937_RS06445	0.15	+1.5
1,439,115	+		DDA3937_RS06445	0.15	+0.7
1,439,115	+		DDA3937_RS06445	0.15	+0.7
1,439,116	-		DDA3937_RS06445	0.15	+0.7
1,439,147	+		DDA3937_RS06445	0.24	+1.2
1,439,147	+		DDA3937_RS06445	0.24	+1.0
1,439,147	+		DDA3937_RS06445	0.24	+0.7
1,439,147	+		DDA3937_RS06445	0.24	+0.6
1,439,147	+		DDA3937_RS06445	0.24	+1.4
1,439,148	-		DDA3937_RS06445	0.24	+1.1
1,439,148	-		DDA3937_RS06445	0.24	+0.5
1,439,148	-		DDA3937_RS06445	0.24	+1.2
1,439,148	-		DDA3937_RS06445	0.24	+0.2
1,439,148	-		DDA3937_RS06445	0.24	-0.3
1,439,148	-		DDA3937_RS06445	0.24	+1.7
1,439,148	-		DDA3937_RS06445	0.24	+0.8
1,439,148	-		DDA3937_RS06445	0.24	+0.0
1,439,156	+		DDA3937_RS06445	0.27	+1.1
1,439,156	+		DDA3937_RS06445	0.27	+0.7
1,439,156	+		DDA3937_RS06445	0.27	+2.2
1,439,156	+		DDA3937_RS06445	0.27	+0.2
1,439,156	+		DDA3937_RS06445	0.27	+0.9
1,439,157	-		DDA3937_RS06445	0.27	+0.8
1,439,157	-		DDA3937_RS06445	0.27	-0.2
1,439,157	-		DDA3937_RS06445	0.27	+0.6
1,439,157	-		DDA3937_RS06445	0.27	+0.9
1,439,157	-		DDA3937_RS06445	0.27	-0.1
1,439,157	-		DDA3937_RS06445	0.27	+0.1
1,439,158	+		DDA3937_RS06445	0.27	+0.5
1,439,158	+		DDA3937_RS06445	0.27	+1.3
1,439,195	+		DDA3937_RS06445	0.38	+0.9
1,439,195	+		DDA3937_RS06445	0.38	-0.7
1,439,195	+		DDA3937_RS06445	0.38	+0.4
1,439,195	+		DDA3937_RS06445	0.38	+0.7
1,439,195	+		DDA3937_RS06445	0.38	+1.0
1,439,195	+		DDA3937_RS06445	0.38	+0.8
1,439,195	+		DDA3937_RS06445	0.38	+1.3
1,439,196	-		DDA3937_RS06445	0.38	+0.6
1,439,196	-		DDA3937_RS06445	0.38	-0.3
1,439,196	-		DDA3937_RS06445	0.38	+0.7
1,439,309	+		DDA3937_RS06445	0.71	-0.1
1,439,309	+		DDA3937_RS06445	0.71	+1.1
1,439,309	+		DDA3937_RS06445	0.71	+0.9
1,439,310	-		DDA3937_RS06445	0.71	+0.1
1,439,310	-		DDA3937_RS06445	0.71	+0.6
1,439,310	-		DDA3937_RS06445	0.71	+0.2
1,439,310	-		DDA3937_RS06445	0.71	+0.7
1,439,340	+		DDA3937_RS06445	0.80	+0.4
1,439,372	+		DDA3937_RS06445	0.89	+0.6
1,439,372	+		DDA3937_RS06445	0.89	+1.1
1,439,372	+		DDA3937_RS06445	0.89	+0.8
1,439,372	+				+0.4
1,439,373	-		DDA3937_RS06445	0.89	-0.6
1,439,373	-		DDA3937_RS06445	0.89	+0.8
1,439,373	-		DDA3937_RS06445	0.89	+1.6
1,439,373	-		DDA3937_RS06445	0.89	+0.6
1,439,381	+				-0.3
1,439,381	+				+0.6
1,439,381	+				+1.2
1,439,381	+				+1.5
1,439,382	-				+0.7
1,439,382	-				+0.4
1,439,382	-				+0.9
1,439,382	-				+0.9
1,439,382	-				+0.1
1,439,382	-				+1.1
1,439,466	+				+0.8
1,439,617	+		DDA3937_RS06450	0.12	+1.2
1,439,617	+		DDA3937_RS06450	0.12	+1.0
1,439,617	+		DDA3937_RS06450	0.12	+1.2
1,439,617	+		DDA3937_RS06450	0.12	+1.2
1,439,617	+		DDA3937_RS06450	0.12	+1.7
1,439,617	+		DDA3937_RS06450	0.12	+0.9
1,439,617	+		DDA3937_RS06450	0.12	+0.9
1,439,617	+		DDA3937_RS06450	0.12	+0.8
1,439,617	+		DDA3937_RS06450	0.12	+0.7
1,439,617	+		DDA3937_RS06450	0.12	+0.7
1,439,617	+		DDA3937_RS06450	0.12	+0.2
1,439,617	+		DDA3937_RS06450	0.12	+0.2
1,439,617	+		DDA3937_RS06450	0.12	+0.8
1,439,617	+		DDA3937_RS06450	0.12	+0.8
1,439,617	+		DDA3937_RS06450	0.12	+1.0
1,439,618	-		DDA3937_RS06450	0.12	+0.6
1,439,618	-		DDA3937_RS06450	0.12	+1.4
1,439,618	-		DDA3937_RS06450	0.12	+0.1
1,439,618	-		DDA3937_RS06450	0.12	+0.2
1,439,618	-		DDA3937_RS06450	0.12	+0.8
1,439,618	-		DDA3937_RS06450	0.12	+0.6
1,439,618	-		DDA3937_RS06450	0.12	+0.8
1,439,618	-		DDA3937_RS06450	0.12	+0.4
1,439,618	-		DDA3937_RS06450	0.12	+0.2
1,439,618	-		DDA3937_RS06450	0.12	+0.5
1,439,618	-		DDA3937_RS06450	0.12	-0.4
1,439,618	-		DDA3937_RS06450	0.12	+1.2
1,439,618	-		DDA3937_RS06450	0.12	+0.4
1,439,618	-		DDA3937_RS06450	0.12	+0.6
1,439,641	+		DDA3937_RS06450	0.13	+0.5
1,439,642	-		DDA3937_RS06450	0.13	+2.0
1,439,642	-		DDA3937_RS06450	0.13	+1.4
1,439,643	+		DDA3937_RS06450	0.13	-0.0
1,439,668	+		DDA3937_RS06450	0.15	+0.1
1,439,668	+		DDA3937_RS06450	0.15	+1.3
1,439,668	+		DDA3937_RS06450	0.15	+0.4
1,439,668	+		DDA3937_RS06450	0.15	+1.0
1,439,668	+		DDA3937_RS06450	0.15	+0.3
1,439,668	+		DDA3937_RS06450	0.15	+0.7
1,439,668	+		DDA3937_RS06450	0.15	+0.5
1,439,669	-		DDA3937_RS06450	0.15	+0.3
1,439,669	-		DDA3937_RS06450	0.15	+0.1
1,439,669	-		DDA3937_RS06450	0.15	+0.8
1,439,669	-		DDA3937_RS06450	0.15	-2.3
1,439,669	-		DDA3937_RS06450	0.15	+0.7
1,439,669	-		DDA3937_RS06450	0.15	+1.2
1,439,670	+		DDA3937_RS06450	0.15	+1.1
1,439,670	+		DDA3937_RS06450	0.15	+0.3
1,439,670	+		DDA3937_RS06450	0.15	+0.2
1,439,670	+		DDA3937_RS06450	0.15	+0.6
1,439,670	+		DDA3937_RS06450	0.15	+1.0
1,439,670	+		DDA3937_RS06450	0.15	+1.0
1,439,670	+		DDA3937_RS06450	0.15	+0.9
1,439,670	+		DDA3937_RS06450	0.15	+1.5
1,439,670	+		DDA3937_RS06450	0.15	+0.8
1,439,671	-		DDA3937_RS06450	0.15	-0.2
1,439,671	-		DDA3937_RS06450	0.15	+1.4
1,439,671	-		DDA3937_RS06450	0.15	+0.4
1,439,671	-		DDA3937_RS06450	0.15	+1.4
1,439,671	-		DDA3937_RS06450	0.15	+0.1
1,439,671	-		DDA3937_RS06450	0.15	+0.6
1,439,671	-		DDA3937_RS06450	0.15	+0.5
1,439,752	+		DDA3937_RS06450	0.19	+0.4
1,439,753	-		DDA3937_RS06450	0.19	+0.7
1,439,857	+		DDA3937_RS06450	0.25	+0.2
1,439,857	+		DDA3937_RS06450	0.25	+0.6
1,439,880	+		DDA3937_RS06450	0.27	+1.0
1,439,902	+		DDA3937_RS06450	0.28	+1.0
1,439,902	+		DDA3937_RS06450	0.28	+0.1
1,439,903	-		DDA3937_RS06450	0.28	+1.5
1,439,950	-		DDA3937_RS06450	0.31	-0.3
1,440,030	+		DDA3937_RS06450	0.35	+1.9
1,440,030	+		DDA3937_RS06450	0.35	+0.8
1,440,030	+		DDA3937_RS06450	0.35	+1.7
1,440,030	+		DDA3937_RS06450	0.35	+0.6
1,440,030	+		DDA3937_RS06450	0.35	+0.1
1,440,030	+		DDA3937_RS06450	0.35	+0.7
1,440,031	-		DDA3937_RS06450	0.35	-0.0
1,440,031	-		DDA3937_RS06450	0.35	+1.5
1,440,031	-		DDA3937_RS06450	0.35	+0.6
1,440,031	-		DDA3937_RS06450	0.35	+0.5
1,440,034	+				-0.1
1,440,034	+		DDA3937_RS06450	0.35	+0.7
1,440,034	+		DDA3937_RS06450	0.35	+0.0
1,440,034	+		DDA3937_RS06450	0.35	+0.6
1,440,034	+		DDA3937_RS06450	0.35	+0.5
1,440,034	+		DDA3937_RS06450	0.35	+0.8
1,440,035	-		DDA3937_RS06450	0.35	+1.6
1,440,035	-		DDA3937_RS06450	0.35	+0.5
1,440,035	-		DDA3937_RS06450	0.35	+0.2
1,440,235	+		DDA3937_RS06450	0.47	-0.7
1,440,273	-		DDA3937_RS06450	0.49	+1.0
1,440,342	+		DDA3937_RS06450	0.53	+0.6