Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10370

Experiment: 3.75mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3.75mM_PTB
2,335,714	-		DDA3937_RS10360	0.84	-0.2
2,335,788	+		DDA3937_RS10360	0.86	-0.9
2,335,789	-		DDA3937_RS10360	0.86	-0.5
2,335,789	-		DDA3937_RS10360	0.86	-0.9
2,335,875	+		DDA3937_RS10360	0.90	-0.9
2,335,875	+		DDA3937_RS10360	0.90	+1.4
2,335,875	+				+0.8
2,335,876	-		DDA3937_RS10360	0.90	-0.5
2,335,876	-		DDA3937_RS10360	0.90	+0.1
2,335,914	+				-0.7
2,335,914	+				+0.1
2,335,914	+				+1.3
2,335,915	-				-0.6
2,335,915	-				-1.2
2,335,915	-				-0.3
2,335,916	+				+0.8
2,335,917	-				-0.5
2,335,917	-				-0.7
2,335,925	+				-0.2
2,335,925	+				+0.1
2,335,925	+				-0.9
2,335,925	+				-0.3
2,335,925	+				-0.6
2,335,926	-				-0.1
2,335,926	-				-0.2
2,335,926	-				+0.1
2,335,926	-				-0.1
2,335,926	-				-1.2
2,335,926	-				-1.7
2,335,932	-				+2.0
2,335,932	-				-0.6
2,335,932	-				+0.2
2,335,962	+				+0.4
2,335,962	+				+0.4
2,335,972	-				+0.1
2,336,016	+				+0.0
2,336,017	-				+0.4
2,336,154	+				-0.6
2,336,155	-				-2.5
2,336,167	+				-0.3
2,336,167	+				-0.2
2,336,167	+				+2.6
2,336,173	+				+0.8
2,336,202	+				-0.2
2,336,206	+				-0.0
2,336,206	+				+0.0
2,336,206	+				+0.1
2,336,207	-				+0.2
2,336,213	+				+0.4
2,336,215	+				-0.6
2,336,215	+				-0.4
2,336,215	+				-0.7
2,336,215	+				+0.8
2,336,215	+				+0.1
2,336,216	-				-0.3
2,336,216	-				+0.0
2,336,216	-				+0.1
2,336,216	-				-0.0
2,336,216	-				+0.0
2,336,216	-				+0.4
2,336,216	-				-0.4
2,336,216	-				+0.3
2,336,239	-				+0.5
2,336,304	+				-0.1
2,336,305	-				-1.7
2,336,527	+				+0.3
2,336,527	+				-0.4
2,336,528	-				+0.0
2,336,531	-				-0.2
2,336,542	+				-0.0
2,336,542	+				-0.7
2,336,542	+				-0.2
2,336,543	-				-1.2
2,336,582	+				-0.2
2,336,582	+				-1.3
2,336,583	-				-0.8
2,336,586	+				-0.3
2,336,587	-				+0.1
2,336,587	-				-1.0
2,336,619	+				+0.8
2,336,620	-				-1.6
2,336,620	-				-0.6
2,336,624	+				-1.2
2,336,625	-				-0.6
2,336,629	+				-1.2
2,336,648	-				-0.9
2,336,684	-				-1.4
2,336,754	+				+0.3
2,336,795	-		DDA3937_RS10370	0.14	-0.4
2,336,797	+				-2.2
2,336,811	-		DDA3937_RS10370	0.17	-1.2
2,336,964	+		DDA3937_RS10370	0.41	-0.2
2,336,965	-		DDA3937_RS10370	0.41	-0.6
2,336,986	-		DDA3937_RS10370	0.44	-1.0
2,337,008	-		DDA3937_RS10370	0.47	-1.0
2,337,053	-		DDA3937_RS10370	0.54	+0.2
2,337,250	+		DDA3937_RS10370	0.85	-0.7
2,337,251	-				+0.4
2,337,342	+				-0.6
2,337,343	-				-0.1
2,337,345	-				-0.6
2,337,371	+				-0.8
2,337,389	-				-1.7
2,337,427	+				+0.4
2,337,427	+				-0.2
2,337,434	+				+0.4
2,337,440	+				+0.4
2,337,440	+				-2.6
2,337,441	-				-1.6
2,337,445	-				-0.2
2,337,445	-				-3.0
2,337,492	+				-0.7
2,337,493	-				-0.6
2,337,496	+				-2.4
2,337,501	+				+1.4
2,337,502	-				+1.1
2,337,502	-				-0.1
2,337,508	+				-0.4
2,337,508	+				+2.0
2,337,546	+				-0.2
2,337,547	-				-1.2
2,337,547	-				-0.0
2,337,568	-				+0.7
2,337,648	+		DDA3937_RS23165	0.31	+0.2
2,337,649	-		DDA3937_RS23165	0.31	-1.4
2,337,654	+		DDA3937_RS23165	0.32	-0.4
2,337,655	-		DDA3937_RS23165	0.33	-0.8
2,337,666	-		DDA3937_RS23165	0.35	+0.2
2,337,670	-		DDA3937_RS23165	0.37	+0.4
2,337,670	-		DDA3937_RS23165	0.37	+0.0
2,337,736	+		DDA3937_RS23165	0.54	+0.7
2,337,746	+		DDA3937_RS23165	0.57	+0.3
2,337,746	+		DDA3937_RS23165	0.57	-0.3
2,337,754	+		DDA3937_RS23165	0.59	+0.8
2,337,796	+		DDA3937_RS23165	0.70	-0.4
2,337,797	-		DDA3937_RS23165	0.70	+1.0
2,337,838	+		DDA3937_RS23165	0.81	-0.2
2,337,838	+		DDA3937_RS23165	0.81	-0.0
2,337,838	+		DDA3937_RS23165	0.81	-0.2
2,337,839	-		DDA3937_RS23165	0.82	-0.5
2,337,839	-		DDA3937_RS23165	0.82	-0.2
2,337,839	-		DDA3937_RS23165	0.82	-1.0
2,337,856	-		DDA3937_RS23165	0.86	-1.3
2,337,856	-		DDA3937_RS23165	0.86	-0.7
2,337,856	-		DDA3937_RS23165	0.86	-0.8
2,337,877	+				-0.5
2,337,877	+				-0.5
2,337,877	+				-0.6
2,337,878	-				-0.8
2,337,878	-				-1.5
2,337,878	-				-1.5
2,337,878	-				-0.2
2,337,878	-				-0.7
2,337,882	+				+0.2
2,337,883	-				-0.5
2,337,883	-				-0.9
2,337,883	-				-0.4
2,337,883	-				-1.3
2,337,883	-				-0.9
2,337,883	-				-0.7
2,337,929	+				-0.4
2,337,930	-				-0.5
2,337,930	-				-2.0
2,337,982	+				-0.6
2,337,982	+				-0.3
2,338,056	-				-0.8
2,338,056	-				-0.8
2,338,062	+				-0.9
2,338,063	-				-0.7
2,338,063	-				-0.7
2,338,063	-				+0.1
2,338,084	-				-0.7
2,338,084	-				+0.4
2,338,084	-				-0.5
2,338,093	+				-0.7
2,338,093	+				+0.1
2,338,094	-				-0.3
2,338,094	-				-1.0
2,338,094	-				-0.4
2,338,094	-				-0.7
2,338,094	-				+0.6
2,338,094	-				-1.0
2,338,160	+				-1.2
2,338,160	+				+0.8
2,338,161	-				-0.9
2,338,161	-				-2.7
2,338,161	-				-0.6
2,338,165	-				-0.9
2,338,174	+				-0.4
2,338,200	-				-1.0
2,338,200	-				-0.9
2,338,200	-				-1.1
2,338,200	-				-0.6
2,338,200	-				-1.0
2,338,200	-				-0.5
2,338,200	-				-1.0
2,338,215	+				-0.7
2,338,215	+				-0.8
2,338,215	+				-0.7
2,338,215	+				-0.5
2,338,215	+				-1.1
2,338,215	+				-0.7
2,338,215	+				-0.1
2,338,216	-				-1.1
2,338,216	-				-1.5
2,338,216	-				-0.8
2,338,216	-				+0.0
2,338,216	-				-0.2
2,338,219	+				-0.6
2,338,219	+				-0.7
2,338,219	+				-0.6
2,338,219	+				-0.6
2,338,220	-				-0.4
2,338,225	+				-0.8
2,338,225	+				-0.6
2,338,225	+				-0.8
2,338,239	-				-1.2
2,338,239	-				-0.9
2,338,271	+				+0.7
2,338,271	+				-0.3
2,338,271	+				+0.3
2,338,271	+				-0.5
2,338,271	+				-1.3
2,338,272	-				-0.8
2,338,272	-				-0.7
2,338,272	-				-0.9
2,338,272	-				-2.2