Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17260

Experiment: 1.88mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1.88mM_PTB
3,927,952	-		DDA3937_RS17250	0.79	+2.1
3,927,952	-		DDA3937_RS17250	0.79	-0.5
3,928,073	+				-0.2
3,928,073	+				+0.1
3,928,073	+				+0.1
3,928,073	+				+1.1
3,928,073	+				+0.5
3,928,074	-				+0.1
3,928,074	-				-0.5
3,928,093	+				-0.1
3,928,113	+				+0.7
3,928,469	+		DDA3937_RS17255	0.49	+0.4
3,928,469	+		DDA3937_RS17255	0.49	-1.2
3,928,475	+		DDA3937_RS17255	0.49	+0.2
3,928,475	+		DDA3937_RS17255	0.49	+2.4
3,928,608	+		DDA3937_RS17255	0.67	+0.3
3,928,608	+		DDA3937_RS17255	0.67	+0.3
3,928,847	+				-0.0
3,928,847	+				+0.1
3,928,847	+				+0.0
3,928,847	+				+0.3
3,928,848	-				+0.4
3,928,850	+				-0.4
3,928,850	+				+0.4
3,928,850	+				+0.4
3,928,850	+				+0.4
3,928,851	-				+0.4
3,928,851	-				-0.4
3,928,851	-				-0.1
3,928,851	-				-1.0
3,928,863	+				+0.8
3,928,864	-				+0.3
3,928,910	-				-0.3
3,929,051	+				+0.4
3,929,052	-				-0.3
3,929,234	+		DDA3937_RS17260	0.12	-0.1
3,929,279	+		DDA3937_RS17260	0.14	+0.0
3,929,280	-		DDA3937_RS17260	0.14	+0.4
3,929,280	-		DDA3937_RS17260	0.14	+0.1
3,929,324	-		DDA3937_RS17260	0.16	-2.0
3,929,377	+		DDA3937_RS17260	0.18	-1.7
3,929,377	+		DDA3937_RS17260	0.18	-0.7
3,929,378	-		DDA3937_RS17260	0.18	+0.4
3,929,380	+		DDA3937_RS17260	0.18	-0.2
3,929,380	+				+1.1
3,929,380	+		DDA3937_RS17260	0.18	-0.8
3,929,380	+		DDA3937_RS17260	0.18	+0.5
3,929,380	+		DDA3937_RS17260	0.18	-0.6
3,929,380	+		DDA3937_RS17260	0.18	+0.2
3,929,380	+		DDA3937_RS17260	0.18	-0.8
3,929,420	+		DDA3937_RS17260	0.20	-1.3
3,929,420	+		DDA3937_RS17260	0.20	-0.3
3,929,471	+		DDA3937_RS17260	0.22	-0.1
3,929,472	-		DDA3937_RS17260	0.22	-0.6
3,929,474	+		DDA3937_RS17260	0.22	-0.1
3,929,474	+		DDA3937_RS17260	0.22	-2.1
3,929,533	-		DDA3937_RS17260	0.24	+0.2
3,929,663	-		DDA3937_RS17260	0.30	-1.1
3,929,663	-		DDA3937_RS17260	0.30	-0.3
3,929,663	-		DDA3937_RS17260	0.30	-1.0
3,929,725	+		DDA3937_RS17260	0.32	-0.5
3,929,726	-		DDA3937_RS17260	0.32	-0.6
3,929,770	+		DDA3937_RS17260	0.34	-0.7
3,929,770	+		DDA3937_RS17260	0.34	-0.8
3,929,770	+		DDA3937_RS17260	0.34	+0.8
3,929,857	+		DDA3937_RS17260	0.38	-0.5
3,930,011	+		DDA3937_RS17260	0.44	-1.5
3,930,012	-		DDA3937_RS17260	0.44	+0.7
3,930,012	-		DDA3937_RS17260	0.44	+0.1
3,930,012	-		DDA3937_RS17260	0.44	-1.1
3,930,172	+		DDA3937_RS17260	0.50	-0.2
3,930,172	+		DDA3937_RS17260	0.50	-1.1
3,930,172	+		DDA3937_RS17260	0.50	+0.5
3,930,173	-		DDA3937_RS17260	0.50	-1.5
3,930,173	-		DDA3937_RS17260	0.50	+0.4
3,930,173	-		DDA3937_RS17260	0.50	-1.0
3,930,173	-		DDA3937_RS17260	0.50	-1.8
3,930,214	+		DDA3937_RS17260	0.52	+0.1
3,930,215	-		DDA3937_RS17260	0.52	-0.3
3,930,225	+		DDA3937_RS17260	0.52	-0.5
3,930,225	+		DDA3937_RS17260	0.52	-0.0
3,930,263	+		DDA3937_RS17260	0.54	+1.1
3,930,263	+		DDA3937_RS17260	0.54	+0.6
3,930,263	+		DDA3937_RS17260	0.54	-0.3
3,930,264	-		DDA3937_RS17260	0.54	-1.0
3,930,265	+		DDA3937_RS17260	0.54	+0.1
3,930,265	+		DDA3937_RS17260	0.54	+0.1
3,930,265	+		DDA3937_RS17260	0.54	-1.1
3,930,265	+		DDA3937_RS17260	0.54	+0.9
3,930,265	+		DDA3937_RS17260	0.54	-1.4
3,930,265	+		DDA3937_RS17260	0.54	-0.3
3,930,265	+		DDA3937_RS17260	0.54	+0.4
3,930,265	+		DDA3937_RS17260	0.54	-0.8
3,930,265	+		DDA3937_RS17260	0.54	+0.2
3,930,266	-		DDA3937_RS17260	0.54	-0.6
3,930,266	-		DDA3937_RS17260	0.54	-1.1
3,930,266	-		DDA3937_RS17260	0.54	+1.1
3,930,266	-		DDA3937_RS17260	0.54	-2.0
3,930,266	-		DDA3937_RS17260	0.54	-0.3
3,930,301	+		DDA3937_RS17260	0.55	-1.2
3,930,301	+		DDA3937_RS17260	0.55	+0.4
3,930,308	+		DDA3937_RS17260	0.56	-0.6
3,930,308	+		DDA3937_RS17260	0.56	+0.1
3,930,308	+		DDA3937_RS17260	0.56	-0.4
3,930,310	+		DDA3937_RS17260	0.56	+0.2
3,930,311	-		DDA3937_RS17260	0.56	-0.2
3,930,356	+				-0.7
3,930,356	+		DDA3937_RS17260	0.58	+0.1
3,930,356	+		DDA3937_RS17260	0.58	+1.1
3,930,356	+		DDA3937_RS17260	0.58	+1.6
3,930,356	+		DDA3937_RS17260	0.58	+0.9
3,930,356	+		DDA3937_RS17260	0.58	-1.4
3,930,356	+		DDA3937_RS17260	0.58	-0.6
3,930,356	+		DDA3937_RS17260	0.58	-0.7
3,930,356	+		DDA3937_RS17260	0.58	-0.4
3,930,356	+		DDA3937_RS17260	0.58	-1.4
3,930,357	-		DDA3937_RS17260	0.58	-0.5
3,930,357	-		DDA3937_RS17260	0.58	-0.7
3,930,357	-		DDA3937_RS17260	0.58	+0.9
3,930,357	-		DDA3937_RS17260	0.58	-0.5
3,930,357	-		DDA3937_RS17260	0.58	-0.8
3,930,357	-		DDA3937_RS17260	0.58	-1.5
3,930,357	-		DDA3937_RS17260	0.58	-1.7
3,930,357	-		DDA3937_RS17260	0.58	-1.3
3,930,357	-		DDA3937_RS17260	0.58	+0.1
3,930,357	-		DDA3937_RS17260	0.58	-1.5
3,930,357	-		DDA3937_RS17260	0.58	+0.5
3,930,357	-		DDA3937_RS17260	0.58	+0.3
3,930,357	-		DDA3937_RS17260	0.58	-0.2
3,930,357	-		DDA3937_RS17260	0.58	+0.4
3,930,357	-		DDA3937_RS17260	0.58	-0.0
3,930,442	+		DDA3937_RS17260	0.61	-0.1
3,930,443	-		DDA3937_RS17260	0.61	-1.5
3,930,499	+		DDA3937_RS17260	0.63	+0.0
3,930,499	+		DDA3937_RS17260	0.63	-1.2
3,930,499	+		DDA3937_RS17260	0.63	-0.9
3,930,500	-		DDA3937_RS17260	0.63	-0.8
3,930,500	-		DDA3937_RS17260	0.63	-1.5
3,930,500	-		DDA3937_RS17260	0.63	-0.1
3,930,500	-		DDA3937_RS17260	0.63	-0.4
3,930,500	-		DDA3937_RS17260	0.63	-0.2
3,930,500	-		DDA3937_RS17260	0.63	+0.3
3,930,502	+		DDA3937_RS17260	0.63	-0.6
3,930,502	+		DDA3937_RS17260	0.63	+0.8
3,930,502	+		DDA3937_RS17260	0.63	-0.2
3,930,562	+		DDA3937_RS17260	0.66	-0.3
3,930,563	-		DDA3937_RS17260	0.66	+0.3
3,930,563	-		DDA3937_RS17260	0.66	-0.6
3,930,563	-		DDA3937_RS17260	0.66	-2.4
3,930,563	-		DDA3937_RS17260	0.66	-1.0
3,930,563	-		DDA3937_RS17260	0.66	-0.7
3,930,803	+		DDA3937_RS17260	0.76	+0.8
3,930,803	+		DDA3937_RS17260	0.76	-0.9
3,930,803	+		DDA3937_RS17260	0.76	+1.4
3,930,804	-		DDA3937_RS17260	0.76	-0.4
3,930,946	+		DDA3937_RS17260	0.81	-0.6
3,930,946	+		DDA3937_RS17260	0.81	+0.6
3,931,087	+		DDA3937_RS17260	0.87	-0.4
3,931,087	+		DDA3937_RS17260	0.87	-0.7
3,931,088	-		DDA3937_RS17260	0.87	+0.1
3,931,088	-		DDA3937_RS17260	0.87	+0.3
3,931,088	-		DDA3937_RS17260	0.87	-1.7
3,931,100	+		DDA3937_RS17260	0.87	+0.3
3,931,101	-		DDA3937_RS17260	0.87	-0.0
3,931,186	+				+0.2
3,931,186	+				+0.7
3,931,186	+				+0.1
3,931,187	-				-0.0
3,931,187	-				-0.8
3,931,203	-				-2.2
3,931,229	+				+0.3
3,931,345	+				+0.5
3,931,345	+				+1.1
3,931,346	-				-0.0
3,931,346	-				+0.7
3,931,454	+				-0.8
3,931,454	+				+0.1
3,931,455	-				+0.2
3,931,455	-				-0.7
3,931,455	-				-1.9
3,931,455	-				-0.2
3,931,455	-				-0.4
3,931,455	-				+0.9
3,931,455	-				+0.7
3,931,468	+				-0.5
3,931,468	+				+0.7
3,931,473	+				-1.6
3,931,473	+				+0.3
3,931,473	+				+0.6
3,931,475	+				+0.3
3,931,475	+				-1.2
3,931,514	+		DDA3937_RS17265	0.14	+0.8
3,931,515	-		DDA3937_RS17265	0.15	+0.4
3,931,587	+		DDA3937_RS17265	0.31	-0.1
3,931,714	-		DDA3937_RS17265	0.61	-0.2
3,931,755	+		DDA3937_RS17265	0.71	-0.2
3,931,756	-		DDA3937_RS17265	0.71	+0.6
3,931,776	-		DDA3937_RS17265	0.76	+0.1
3,931,786	+		DDA3937_RS17265	0.78	-0.9
3,931,787	-		DDA3937_RS17265	0.78	+0.5
3,931,832	+		DDA3937_RS17265	0.89	+0.4
3,931,833	-		DDA3937_RS17265	0.89	+0.7
3,931,833	-		DDA3937_RS17265	0.89	-1.7
3,931,833	-		DDA3937_RS17265	0.89	-0.4
3,931,853	+				-1.7
3,931,892	+				-0.9
3,931,910	+				-0.2
3,931,911	-				-0.7
3,932,004	-				+0.2
3,932,004	-				+0.1
3,932,036	-				+0.3
3,932,036	-				-0.5
3,932,100	-				+1.3
3,932,117	+				+1.1
3,932,118	-				-0.3
3,932,137	+				+0.3
3,932,155	-				-0.6
3,932,160	+				+0.4
3,932,160	+				+0.2
3,932,160	+				-1.5
3,932,160	+				-0.1
3,932,161	-				+0.2
3,932,170	+				+0.5
3,932,171	-				+0.0
3,932,176	-				-0.7
3,932,226	+				+0.7
3,932,227	-				-0.2
3,932,276	+				-0.4
3,932,276	+				-0.2
3,932,300	+				-0.3
3,932,300	+				-2.2
3,932,301	-				-1.7
3,932,301	-				-1.2
3,932,307	-				+0.3
3,932,307	-				-1.2