Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17110

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,897,172	+		DDA3937_RS17105	0.71	+0.2
3,897,172	+		DDA3937_RS17105	0.71	+0.4
3,897,173	-		DDA3937_RS17105	0.71	-0.2
3,897,173	-		DDA3937_RS17105	0.71	-0.4
3,897,173	-		DDA3937_RS17105	0.71	-0.4
3,897,217	+		DDA3937_RS17105	0.72	-0.4
3,897,218	-		DDA3937_RS17105	0.72	+0.0
3,897,248	-		DDA3937_RS17105	0.74	-0.1
3,897,250	+		DDA3937_RS17105	0.74	-1.2
3,897,250	+		DDA3937_RS17105	0.74	-0.5
3,897,250	+		DDA3937_RS17105	0.74	+0.2
3,897,250	+		DDA3937_RS17105	0.74	-0.9
3,897,250	+		DDA3937_RS17105	0.74	-0.1
3,897,251	-		DDA3937_RS17105	0.74	+0.0
3,897,251	-		DDA3937_RS17105	0.74	-0.4
3,897,251	-		DDA3937_RS17105	0.74	-0.4
3,897,251	-		DDA3937_RS17105	0.74	-2.2
3,897,251	-		DDA3937_RS17105	0.74	+0.1
3,897,251	-		DDA3937_RS17105	0.74	+0.8
3,897,578	+		DDA3937_RS17105	0.85	+0.1
3,897,580	+		DDA3937_RS17105	0.85	-1.1
3,897,580	+		DDA3937_RS17105	0.85	-0.2
3,897,581	-		DDA3937_RS17105	0.85	-1.5
3,897,581	-		DDA3937_RS17105	0.85	+0.6
3,897,654	-		DDA3937_RS17105	0.88	-1.3
3,898,058	-				+0.6
3,898,103	+				-0.2
3,898,174	+				-0.7
3,898,175	-				-0.3
3,898,199	+				-1.0
3,898,199	+				-0.5
3,898,201	+				-0.8
3,898,202	-				+0.0
3,898,261	-		DDA3937_RS17110	0.10	+0.5
3,898,261	-		DDA3937_RS17110	0.10	-0.2
3,898,335	-		DDA3937_RS17110	0.16	-0.8
3,898,347	+		DDA3937_RS17110	0.17	-0.1
3,898,347	+		DDA3937_RS17110	0.17	-1.1
3,898,348	-		DDA3937_RS17110	0.17	-0.2
3,898,348	-		DDA3937_RS17110	0.17	-0.1
3,898,471	-		DDA3937_RS17110	0.26	+0.1
3,898,527	+		DDA3937_RS17110	0.30	+0.0
3,898,539	+		DDA3937_RS17110	0.31	+0.3
3,898,540	-		DDA3937_RS17110	0.31	+0.2
3,898,731	+		DDA3937_RS17110	0.45	-0.3
3,898,731	+		DDA3937_RS17110	0.45	+0.5
3,898,732	-		DDA3937_RS17110	0.45	-0.8
3,898,732	-		DDA3937_RS17110	0.45	-1.1
3,898,744	+		DDA3937_RS17110	0.46	+0.2
3,898,745	-		DDA3937_RS17110	0.46	-0.3
3,898,745	-		DDA3937_RS17110	0.46	-0.8
3,898,753	-		DDA3937_RS17110	0.47	+0.6
3,898,792	+		DDA3937_RS17110	0.50	+0.4
3,898,793	-		DDA3937_RS17110	0.50	-0.8
3,898,793	-		DDA3937_RS17110	0.50	-0.4
3,898,800	-		DDA3937_RS17110	0.51	-0.0
3,898,893	-		DDA3937_RS17110	0.58	+0.1
3,899,025	-		DDA3937_RS17110	0.67	-0.5
3,899,097	-		DDA3937_RS17110	0.73	-0.1
3,899,161	+		DDA3937_RS17110	0.78	+0.6
3,899,162	-		DDA3937_RS17110	0.78	+0.6
3,899,193	+		DDA3937_RS17110	0.80	-0.1
3,899,193	+		DDA3937_RS17110	0.80	-0.6
3,899,193	+		DDA3937_RS17110	0.80	-0.0
3,899,193	+		DDA3937_RS17110	0.80	+0.0
3,899,194	-		DDA3937_RS17110	0.80	+0.5
3,899,304	+		DDA3937_RS17110	0.88	-0.5
3,899,304	+		DDA3937_RS17110	0.88	+0.7
3,899,304	+		DDA3937_RS17110	0.88	-0.3
3,899,323	-		DDA3937_RS17110	0.90	-0.7
3,899,326	-				-0.6
3,899,330	-				-0.6
3,899,330	-				+0.3
3,899,330	-				-1.2
3,899,431	+				+0.1
3,899,458	+				-0.5
3,899,458	+				+0.2
3,899,459	-				+1.5
3,899,459	-				-0.6
3,899,459	-				-0.8
3,899,497	-				+0.1
3,899,497	-				-0.4
3,899,500	+				-0.7
3,899,500	+				-0.4
3,899,509	-				-0.4
3,899,509	-				+0.8
3,899,608	+				-0.3
3,899,608	+				-0.3
3,899,633	-				-0.9
3,899,677	+				-1.5
3,899,678	-				+0.3
3,899,678	-				-0.2
3,899,678	-				+0.9
3,899,678	-				+0.8
3,899,735	-				-0.1
3,899,752	-				-0.3
3,899,845	+		DDA3937_RS17115	0.13	+0.6
3,899,845	+		DDA3937_RS17115	0.13	-0.1
3,899,847	+		DDA3937_RS17115	0.13	+1.6
3,899,848	-		DDA3937_RS17115	0.13	+0.0
3,899,848	-		DDA3937_RS17115	0.13	+0.8
3,899,848	-		DDA3937_RS17115	0.13	+0.0
3,899,848	-		DDA3937_RS17115	0.13	+0.2
3,899,869	+		DDA3937_RS17115	0.16	-0.7
3,899,870	-		DDA3937_RS17115	0.17	-0.0
3,899,870	-		DDA3937_RS17115	0.17	-0.2
3,899,870	-		DDA3937_RS17115	0.17	-0.3
3,899,870	-		DDA3937_RS17115	0.17	+0.3
3,899,941	-		DDA3937_RS17115	0.28	-0.1
3,899,966	-		DDA3937_RS17115	0.32	+0.3
3,900,094	-		DDA3937_RS17115	0.53	+0.3
3,900,237	-		DDA3937_RS17115	0.76	+0.0
3,900,288	+		DDA3937_RS17115	0.84	-0.3
3,900,288	+		DDA3937_RS17115	0.84	-0.6
3,900,288	+		DDA3937_RS17115	0.84	-0.1
3,900,288	+		DDA3937_RS17115	0.84	+0.8
3,900,292	+		DDA3937_RS17115	0.85	+0.6
3,900,292	+		DDA3937_RS17115	0.85	+0.1
3,900,292	+		DDA3937_RS17115	0.85	-1.9
3,900,292	+		DDA3937_RS17115	0.85	+0.1
3,900,292	+		DDA3937_RS17115	0.85	+0.1
3,900,293	-		DDA3937_RS17115	0.85	+0.8
3,900,332	+				-0.0
3,900,332	+				-0.8
3,900,333	-				-0.5
3,900,360	+				+0.2
3,900,361	-				-0.5
3,900,361	-				-0.2
3,900,386	-				-0.8
3,900,386	-				-0.6
3,900,386	-				-0.0