Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13330

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,041,836	+		DDA3937_RS13325	0.22	-1.4
3,041,836	+				-1.8
3,041,836	+		DDA3937_RS13325	0.22	-2.0
3,041,836	+		DDA3937_RS13325	0.22	-0.7
3,041,837	-		DDA3937_RS13325	0.22	-1.8
3,041,860	+		DDA3937_RS13325	0.24	-1.3
3,041,860	+		DDA3937_RS13325	0.24	-0.0
3,041,861	-		DDA3937_RS13325	0.24	-0.8
3,041,861	-		DDA3937_RS13325	0.24	-1.4
3,041,861	-		DDA3937_RS13325	0.24	-0.1
3,041,861	-		DDA3937_RS13325	0.24	-2.2
3,041,861	-		DDA3937_RS13325	0.24	-1.0
3,041,866	+		DDA3937_RS13325	0.24	-1.3
3,041,866	+		DDA3937_RS13325	0.24	-0.7
3,041,867	-		DDA3937_RS13325	0.25	-1.1
3,041,867	-		DDA3937_RS13325	0.25	-0.7
3,041,867	-		DDA3937_RS13325	0.25	-0.3
3,041,913	-		DDA3937_RS13325	0.28	-1.6
3,041,935	+		DDA3937_RS13325	0.30	-1.1
3,041,936	-		DDA3937_RS13325	0.30	-1.3
3,041,936	-		DDA3937_RS13325	0.30	-1.4
3,041,936	-		DDA3937_RS13325	0.30	+0.6
3,041,944	+		DDA3937_RS13325	0.31	-0.6
3,041,944	+		DDA3937_RS13325	0.31	-1.9
3,041,945	-		DDA3937_RS13325	0.31	-1.4
3,041,945	-		DDA3937_RS13325	0.31	-0.7
3,041,945	-		DDA3937_RS13325	0.31	-3.2
3,041,945	-		DDA3937_RS13325	0.31	-0.8
3,041,948	+		DDA3937_RS13325	0.31	-0.4
3,041,949	-		DDA3937_RS13325	0.32	-1.4
3,041,949	-		DDA3937_RS13325	0.32	+0.6
3,041,949	-		DDA3937_RS13325	0.32	-0.4
3,041,978	+		DDA3937_RS13325	0.34	-1.9
3,041,980	+		DDA3937_RS13325	0.34	-0.8
3,042,035	+		DDA3937_RS13325	0.39	+0.6
3,042,086	-		DDA3937_RS13325	0.43	-0.9
3,042,190	+		DDA3937_RS13325	0.52	+0.6
3,042,244	+		DDA3937_RS13325	0.57	-1.2
3,042,244	+		DDA3937_RS13325	0.57	-1.3
3,042,245	-		DDA3937_RS13325	0.57	-2.0
3,042,276	-		DDA3937_RS13325	0.59	+0.6
3,042,305	+		DDA3937_RS13325	0.62	-1.3
3,042,306	-		DDA3937_RS13325	0.62	-1.3
3,042,310	+		DDA3937_RS13325	0.62	-1.4
3,042,329	+				+0.6
3,042,562	+		DDA3937_RS13325	0.84	-0.0
3,042,562	+		DDA3937_RS13325	0.84	-0.2
3,042,563	-		DDA3937_RS13325	0.84	-0.9
3,042,616	+		DDA3937_RS13325	0.89	-0.8
3,042,616	+		DDA3937_RS13325	0.89	-1.2
3,042,616	+		DDA3937_RS13325	0.89	-3.0
3,042,617	-		DDA3937_RS13325	0.89	-0.9
3,042,643	+				-2.1
3,042,684	+				-0.7
3,042,685	-				+1.1
3,042,688	+				-1.0
3,042,688	+				-1.3
3,042,688	+				-0.9
3,042,688	+				-0.2
3,042,688	+				-1.2
3,042,698	+				-1.0
3,042,698	+				-0.0
3,042,699	-				-1.4
3,042,699	-				-2.0
3,042,725	+				-2.4
3,042,725	+				-1.1
3,042,726	-				-0.2
3,042,735	+				-1.0
3,042,735	+				-1.0
3,042,739	+				-1.5
3,042,739	+				-1.1
3,042,739	+				-3.5
3,042,739	+				-1.3
3,042,739	+				-1.5
3,042,739	+				-1.4
3,042,740	-				+1.4
3,042,740	-				+0.0
3,042,740	-				-0.1
3,042,740	-				-0.6
3,042,758	+				-1.0
3,042,761	+				-1.4
3,042,768	-				+0.3
3,042,824	+				-0.3
3,042,824	+				-0.1
3,042,828	+				+1.3
3,042,829	-				-1.3
3,042,829	-				-2.6
3,042,829	-				-0.9
3,042,829	-				+0.9
3,042,829	-				-0.2
3,042,834	+				-0.8
3,042,834	+				-0.9
3,042,924	+				-0.9
3,042,925	-				-1.0
3,042,929	-				-2.4
3,042,929	-				+0.6
3,042,938	+				-0.3
3,043,021	-				-0.4
3,043,021	-				-0.2
3,043,034	+				-2.0
3,043,034	+				-0.4
3,043,035	-				-1.0
3,043,082	-				-1.8
3,043,183	+		DDA3937_RS13330	0.10	-0.7
3,043,186	-		DDA3937_RS13330	0.10	-1.8
3,043,186	-		DDA3937_RS13330	0.10	-0.0
3,043,191	+		DDA3937_RS13330	0.10	+0.6
3,043,191	+		DDA3937_RS13330	0.10	-1.3
3,043,195	+		DDA3937_RS13330	0.11	-1.7
3,043,195	+		DDA3937_RS13330	0.11	-1.4
3,043,196	-		DDA3937_RS13330	0.11	-0.3
3,043,211	+		DDA3937_RS13330	0.11	-1.0
3,043,212	-		DDA3937_RS13330	0.11	-0.1
3,043,212	-		DDA3937_RS13330	0.11	-0.8
3,043,212	-		DDA3937_RS13330	0.11	-0.8
3,043,212	-		DDA3937_RS13330	0.11	-1.0
3,043,233	+		DDA3937_RS13330	0.12	-0.4
3,043,312	-		DDA3937_RS13330	0.14	+0.2
3,043,338	+		DDA3937_RS13330	0.15	-1.6
3,043,339	-		DDA3937_RS13330	0.15	-2.2
3,043,339	-		DDA3937_RS13330	0.15	-2.0
3,043,339	-		DDA3937_RS13330	0.15	-1.8
3,043,447	-		DDA3937_RS13330	0.18	-1.4
3,043,507	-		DDA3937_RS13330	0.20	-1.2
3,043,524	+		DDA3937_RS13330	0.20	-3.2
3,043,525	-		DDA3937_RS13330	0.20	-0.9
3,043,525	-		DDA3937_RS13330	0.20	-0.8
3,043,546	-		DDA3937_RS13330	0.21	-1.1
3,043,546	-		DDA3937_RS13330	0.21	-0.4
3,043,572	+		DDA3937_RS13330	0.21	-0.6
3,043,572	+		DDA3937_RS13330	0.21	-1.7
3,043,572	+		DDA3937_RS13330	0.21	-0.7
3,043,573	-		DDA3937_RS13330	0.21	+0.4
3,043,573	-		DDA3937_RS13330	0.21	-1.5
3,043,573	-		DDA3937_RS13330	0.21	-1.8
3,043,573	-		DDA3937_RS13330	0.21	-1.5
3,043,573	-		DDA3937_RS13330	0.21	-1.4
3,043,573	-		DDA3937_RS13330	0.21	-2.6
3,043,573	-		DDA3937_RS13330	0.21	-0.4
3,043,593	+		DDA3937_RS13330	0.22	-1.0
3,043,593	+		DDA3937_RS13330	0.22	+0.1
3,043,593	+		DDA3937_RS13330	0.22	-1.3
3,043,593	+		DDA3937_RS13330	0.22	-1.2
3,043,593	+		DDA3937_RS13330	0.22	-1.2
3,043,594	-		DDA3937_RS13330	0.22	-1.0
3,043,594	-		DDA3937_RS13330	0.22	+0.6
3,043,684	+		DDA3937_RS13330	0.25	-1.7
3,043,686	+		DDA3937_RS13330	0.25	-0.6
3,043,686	+		DDA3937_RS13330	0.25	-1.5
3,043,687	-		DDA3937_RS13330	0.25	-2.6
3,043,687	-		DDA3937_RS13330	0.25	-0.7
3,043,687	-		DDA3937_RS13330	0.25	-1.4
3,043,693	+		DDA3937_RS13330	0.25	-0.4
3,043,694	-		DDA3937_RS13330	0.25	-0.4
3,043,694	-		DDA3937_RS13330	0.25	+0.1
3,043,802	+				-2.2
3,043,803	-		DDA3937_RS13330	0.28	-1.1
3,043,826	-		DDA3937_RS13330	0.29	-1.2
3,043,842	+		DDA3937_RS13330	0.29	-1.2
3,043,843	-		DDA3937_RS13330	0.29	-3.0
3,043,843	-		DDA3937_RS13330	0.29	-0.8
3,043,947	-		DDA3937_RS13330	0.32	-1.4
3,043,967	-		DDA3937_RS13330	0.33	+0.6
3,043,967	-		DDA3937_RS13330	0.33	-2.1
3,043,978	-		DDA3937_RS13330	0.33	-1.0
3,044,103	+		DDA3937_RS13330	0.37	-1.4
3,044,103	+		DDA3937_RS13330	0.37	-1.8
3,044,103	+		DDA3937_RS13330	0.37	-2.4
3,044,103	+		DDA3937_RS13330	0.37	-0.2
3,044,140	+		DDA3937_RS13330	0.38	+0.4
3,044,148	+		DDA3937_RS13330	0.38	-3.1
3,044,246	-		DDA3937_RS13330	0.41	-1.5
3,044,405	-		DDA3937_RS13330	0.46	+0.6
3,044,406	+		DDA3937_RS13330	0.46	-0.1
3,044,407	-		DDA3937_RS13330	0.46	-1.0
3,044,457	-		DDA3937_RS13330	0.47	-0.8
3,044,487	+		DDA3937_RS13330	0.48	-0.4
3,044,487	+		DDA3937_RS13330	0.48	-1.1
3,044,487	+		DDA3937_RS13330	0.48	+0.1
3,044,487	+				-1.4
3,044,487	+		DDA3937_RS13330	0.48	-1.6
3,044,487	+				-0.8
3,044,487	+		DDA3937_RS13330	0.48	-0.0
3,044,487	+		DDA3937_RS13330	0.48	-0.4
3,044,487	+		DDA3937_RS13330	0.48	-1.4
3,044,487	+		DDA3937_RS13330	0.48	-1.4
3,044,487	+		DDA3937_RS13330	0.48	+0.6
3,044,487	+		DDA3937_RS13330	0.48	-2.2
3,044,487	+		DDA3937_RS13330	0.48	-0.4
3,044,487	+		DDA3937_RS13330	0.48	-1.4
3,044,488	-		DDA3937_RS13330	0.48	-1.8
3,044,488	-		DDA3937_RS13330	0.48	-1.4
3,044,488	-		DDA3937_RS13330	0.48	+0.2
3,044,488	-		DDA3937_RS13330	0.48	-0.6
3,044,488	-		DDA3937_RS13330	0.48	-0.8
3,044,488	-		DDA3937_RS13330	0.48	-2.4
3,044,488	-		DDA3937_RS13330	0.48	-2.1
3,044,488	-		DDA3937_RS13330	0.48	-0.4
3,044,488	-		DDA3937_RS13330	0.48	-1.0
3,044,488	-		DDA3937_RS13330	0.48	-0.6
3,044,488	-		DDA3937_RS13330	0.48	-0.9
3,044,491	+		DDA3937_RS13330	0.48	-1.8
3,044,491	+		DDA3937_RS13330	0.48	-1.4
3,044,492	-		DDA3937_RS13330	0.48	-1.1
3,044,529	+		DDA3937_RS13330	0.49	-1.4
3,044,530	-		DDA3937_RS13330	0.49	-1.4
3,044,533	+		DDA3937_RS13330	0.49	-1.7
3,044,533	+		DDA3937_RS13330	0.49	-1.7
3,044,607	+		DDA3937_RS13330	0.51	-2.9
3,044,608	-		DDA3937_RS13330	0.52	-1.6
3,044,608	-		DDA3937_RS13330	0.52	-0.0
3,044,608	-		DDA3937_RS13330	0.52	-1.0
3,044,644	+		DDA3937_RS13330	0.53	-1.0
3,044,709	+		DDA3937_RS13330	0.54	-1.9
3,044,709	+		DDA3937_RS13330	0.54	-1.9
3,044,709	+		DDA3937_RS13330	0.54	-1.2
3,044,709	+		DDA3937_RS13330	0.54	-0.9
3,044,709	+		DDA3937_RS13330	0.54	-3.1
3,044,710	-		DDA3937_RS13330	0.54	-0.9
3,044,710	-		DDA3937_RS13330	0.54	-1.2
3,044,710	-		DDA3937_RS13330	0.54	+1.1
3,044,710	-		DDA3937_RS13330	0.54	-1.2
3,044,710	-		DDA3937_RS13330	0.54	-1.0
3,044,710	-		DDA3937_RS13330	0.54	-1.0
3,044,710	-		DDA3937_RS13330	0.54	-1.5
3,044,710	-		DDA3937_RS13330	0.54	-0.9
3,044,729	-		DDA3937_RS13330	0.55	-0.4
3,044,730	+		DDA3937_RS13330	0.55	+1.1
3,044,730	+		DDA3937_RS13330	0.55	-1.6
3,044,730	+		DDA3937_RS13330	0.55	-2.0
3,044,731	-		DDA3937_RS13330	0.55	+0.6
3,044,731	-		DDA3937_RS13330	0.55	-2.0
3,044,778	+		DDA3937_RS13330	0.56	-2.2
3,044,779	-		DDA3937_RS13330	0.56	-1.2
3,044,779	-		DDA3937_RS13330	0.56	-0.8
3,044,818	+		DDA3937_RS13330	0.58	-1.9
3,044,818	+		DDA3937_RS13330	0.58	-1.6
3,044,819	-		DDA3937_RS13330	0.58	-1.0
3,044,821	+		DDA3937_RS13330	0.58	-1.2
3,044,908	+		DDA3937_RS13330	0.60	+0.1
3,044,909	-		DDA3937_RS13330	0.60	-1.8
3,044,911	+		DDA3937_RS13330	0.60	-0.1
3,044,911	+		DDA3937_RS13330	0.60	-0.7
3,044,911	+		DDA3937_RS13330	0.60	-1.6
3,044,912	-		DDA3937_RS13330	0.60	+0.6
3,044,912	-		DDA3937_RS13330	0.60	-1.7
3,044,987	-		DDA3937_RS13330	0.63	-1.9
3,044,987	-		DDA3937_RS13330	0.63	-1.2
3,045,007	+		DDA3937_RS13330	0.63	-0.6
3,045,027	+		DDA3937_RS13330	0.64	-1.0
3,045,027	+		DDA3937_RS13330	0.64	-1.6
3,045,027	+		DDA3937_RS13330	0.64	-1.5
3,045,120	+		DDA3937_RS13330	0.66	-1.4
3,045,121	-		DDA3937_RS13330	0.66	-1.4
3,045,121	-		DDA3937_RS13330	0.66	-1.2
3,045,180	+		DDA3937_RS13330	0.68	-1.9
3,045,181	-		DDA3937_RS13330	0.68	-0.4
3,045,181	-		DDA3937_RS13330	0.68	+1.3
3,045,181	-		DDA3937_RS13330	0.68	-0.1
3,045,184	+		DDA3937_RS13330	0.68	-0.4
3,045,184	+		DDA3937_RS13330	0.68	-2.6
3,045,184	+		DDA3937_RS13330	0.68	-1.4
3,045,184	+		DDA3937_RS13330	0.68	-1.3
3,045,184	+		DDA3937_RS13330	0.68	-1.3
3,045,184	+		DDA3937_RS13330	0.68	-0.7
3,045,185	-		DDA3937_RS13330	0.68	-3.1
3,045,185	-		DDA3937_RS13330	0.68	-0.2
3,045,185	-		DDA3937_RS13330	0.68	-1.9
3,045,185	-		DDA3937_RS13330	0.68	-2.2
3,045,187	+		DDA3937_RS13330	0.68	-1.9
3,045,187	+		DDA3937_RS13330	0.68	-1.8
3,045,187	+				-0.4
3,045,187	+		DDA3937_RS13330	0.68	-1.0
3,045,188	-		DDA3937_RS13330	0.68	+0.6
3,045,188	-		DDA3937_RS13330	0.68	-2.0
3,045,188	-		DDA3937_RS13330	0.68	-1.4
3,045,360	+		DDA3937_RS13330	0.73	-0.3
3,045,361	-		DDA3937_RS13330	0.73	-0.4
3,045,361	-		DDA3937_RS13330	0.73	-4.0
3,045,398	+		DDA3937_RS13330	0.74	-0.7
3,045,398	+		DDA3937_RS13330	0.74	-1.9
3,045,399	-		DDA3937_RS13330	0.74	+0.6
3,045,399	-		DDA3937_RS13330	0.74	-1.6
3,045,413	+		DDA3937_RS13330	0.75	-1.0
3,045,413	+		DDA3937_RS13330	0.75	-0.3
3,045,413	+				-0.8
3,045,413	+		DDA3937_RS13330	0.75	-1.3
3,045,413	+		DDA3937_RS13330	0.75	-1.4
3,045,413	+		DDA3937_RS13330	0.75	-1.9
3,045,413	+				-1.4
3,045,414	-		DDA3937_RS13330	0.75	-1.2
3,045,414	-		DDA3937_RS13330	0.75	-0.4
3,045,414	-		DDA3937_RS13330	0.75	-2.3
3,045,421	-		DDA3937_RS13330	0.75	+0.7
3,045,467	+		DDA3937_RS13330	0.76	-1.2
3,045,488	+		DDA3937_RS13330	0.77	-0.4
3,045,488	+		DDA3937_RS13330	0.77	+0.6
3,045,489	-		DDA3937_RS13330	0.77	-1.0
3,045,489	-		DDA3937_RS13330	0.77	-0.8
3,045,509	+		DDA3937_RS13330	0.78	-2.0
3,045,509	+		DDA3937_RS13330	0.78	-1.8
3,045,509	+		DDA3937_RS13330	0.78	-0.1
3,045,510	-		DDA3937_RS13330	0.78	-1.4
3,045,554	+		DDA3937_RS13330	0.79	-1.3
3,045,555	-		DDA3937_RS13330	0.79	-1.0
3,045,555	-		DDA3937_RS13330	0.79	-2.4
3,045,555	-		DDA3937_RS13330	0.79	-1.7
3,045,582	-		DDA3937_RS13330	0.80	-1.5
3,045,627	+		DDA3937_RS13330	0.81	-1.6
3,045,683	+		DDA3937_RS13330	0.83	-0.5
3,045,684	-		DDA3937_RS13330	0.83	-0.7
3,045,754	-		DDA3937_RS13330	0.85	+0.1
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3,045,800	+		DDA3937_RS13330	0.86	-1.6
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3,045,961	+				+0.4
3,046,224	+				-1.4
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3,046,681	-		DDA3937_RS13335	0.27	-0.9
3,046,681	-		DDA3937_RS13335	0.27	-2.9
3,046,747	+		DDA3937_RS13335	0.41	-0.8
3,047,152	+				+1.1
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3,047,275	-				-1.0
3,047,275	-				+0.2