Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09800

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,211,689	+				+0.2
2,211,689	+				+0.4
2,211,691	+				+0.2
2,211,692	-				+0.7
2,211,692	-				-1.4
2,211,697	+				+0.1
2,211,982	+		DDA3937_RS09795	0.54	-0.8
2,211,990	-		DDA3937_RS09795	0.56	-0.2
2,212,009	+		DDA3937_RS09795	0.59	+0.0
2,212,009	+		DDA3937_RS09795	0.59	-1.2
2,212,009	+		DDA3937_RS09795	0.59	+0.4
2,212,010	-				-2.2
2,212,112	+		DDA3937_RS09795	0.79	+0.6
2,212,112	+		DDA3937_RS09795	0.79	-1.1
2,212,112	+		DDA3937_RS09795	0.79	+0.5
2,212,113	-		DDA3937_RS09795	0.79	+0.4
2,212,113	-		DDA3937_RS09795	0.79	-1.0
2,212,113	-		DDA3937_RS09795	0.79	+0.5
2,212,113	-		DDA3937_RS09795	0.79	-1.1
2,212,113	-		DDA3937_RS09795	0.79	-0.6
2,212,113	-		DDA3937_RS09795	0.79	-0.4
2,212,114	+		DDA3937_RS09795	0.79	+0.9
2,212,114	+		DDA3937_RS09795	0.79	-0.4
2,212,114	+		DDA3937_RS09795	0.79	-0.3
2,212,115	-		DDA3937_RS09795	0.79	-2.2
2,212,211	+				+0.7
2,212,256	+				-0.5
2,212,256	+				+0.2
2,212,256	+				-0.9
2,212,256	+				-0.9
2,212,256	+				-0.4
2,212,256	+				+0.5
2,212,256	+				-0.2
2,212,257	-				+0.1
2,212,257	-				-1.5
2,212,257	-				+0.8
2,212,372	-		DDA3937_RS09800	0.19	-0.4
2,212,374	+		DDA3937_RS09800	0.19	+0.1
2,212,374	+		DDA3937_RS09800	0.19	+0.3
2,212,375	-		DDA3937_RS09800	0.19	+0.5
2,212,420	-		DDA3937_RS09800	0.24	+0.0
2,212,420	-		DDA3937_RS09800	0.24	-0.6
2,212,572	+		DDA3937_RS09800	0.41	+1.2
2,212,699	-		DDA3937_RS09800	0.55	-0.1
2,212,813	+		DDA3937_RS09800	0.67	+0.5
2,212,889	+		DDA3937_RS09800	0.76	-0.6
2,212,889	+		DDA3937_RS09800	0.76	-1.2
2,212,890	-		DDA3937_RS09800	0.76	+0.5
2,212,890	-		DDA3937_RS09800	0.76	+0.1
2,212,892	+		DDA3937_RS09800	0.76	-1.6
2,212,893	-		DDA3937_RS09800	0.76	-0.0
2,212,977	-		DDA3937_RS09800	0.85	+0.9
2,213,096	-				-0.6
2,213,119	-				-0.3
2,213,119	-				+0.5
2,213,119	-				+0.1
2,213,119	-				-1.0
2,213,121	+				+1.5
2,213,122	-				+0.0
2,213,203	+				-0.3
2,213,204	-				-0.3
2,213,263	+				-1.4
2,213,264	-				-0.6
2,213,264	-				-0.2
2,213,277	-				-0.3
2,213,339	+				-0.2
2,213,339	+				-0.8
2,213,339	+				+0.4
2,213,339	+				-1.2
2,213,339	+				+0.6
2,213,339	+				+1.4
2,213,339	+				+0.2
2,213,339	+				-0.2
2,213,339	+				-0.0
2,213,340	-				-0.3
2,213,340	-				-0.4
2,213,340	-				+0.3
2,213,340	-				-1.3
2,213,353	-				-0.9
2,213,353	-				-0.8
2,213,377	-				-0.6
2,213,377	-				+0.4
2,213,380	-				+0.0
2,213,380	-				+0.8
2,213,388	+				+0.4
2,213,389	-				+0.9
2,213,389	-				-0.6
2,213,432	+		DDA3937_RS09805	0.13	-0.0
2,213,432	+				-1.2
2,213,433	-		DDA3937_RS09805	0.13	-1.5
2,213,433	-		DDA3937_RS09805	0.13	+1.9
2,213,440	+		DDA3937_RS09805	0.14	-0.1
2,213,481	+		DDA3937_RS09805	0.20	-1.1
2,213,674	+		DDA3937_RS09805	0.45	-1.3
2,213,674	+		DDA3937_RS09805	0.45	-0.6
2,213,674	+		DDA3937_RS09805	0.45	+0.0
2,213,675	-		DDA3937_RS09805	0.46	-2.2
2,213,675	-		DDA3937_RS09805	0.46	+1.2
2,213,675	-		DDA3937_RS09805	0.46	-0.1
2,213,675	-		DDA3937_RS09805	0.46	-0.2
2,213,675	-		DDA3937_RS09805	0.46	-0.3
2,213,675	-		DDA3937_RS09805	0.46	-0.4
2,213,675	-		DDA3937_RS09805	0.46	+0.4
2,213,677	+		DDA3937_RS09805	0.46	+0.4
2,213,677	+		DDA3937_RS09805	0.46	-0.9
2,213,677	+		DDA3937_RS09805	0.46	+0.0
2,213,677	+		DDA3937_RS09805	0.46	-1.0
2,213,677	+		DDA3937_RS09805	0.46	-0.6
2,213,677	+		DDA3937_RS09805	0.46	+0.4
2,213,677	+		DDA3937_RS09805	0.46	-0.3
2,213,677	+		DDA3937_RS09805	0.46	+0.1
2,213,677	+		DDA3937_RS09805	0.46	+0.0
2,213,677	+		DDA3937_RS09805	0.46	-0.1
2,213,677	+		DDA3937_RS09805	0.46	-0.5
2,213,678	-		DDA3937_RS09805	0.46	-0.8
2,213,678	-		DDA3937_RS09805	0.46	-1.1
2,213,678	-		DDA3937_RS09805	0.46	+0.7
2,213,678	-		DDA3937_RS09805	0.46	-0.5
2,213,678	-		DDA3937_RS09805	0.46	-0.9
2,213,678	-		DDA3937_RS09805	0.46	-1.4
2,213,772	+		DDA3937_RS09805	0.58	-0.1
2,213,809	+		DDA3937_RS09805	0.63	-0.2
2,213,810	-		DDA3937_RS09805	0.63	-1.2
2,213,810	-		DDA3937_RS09805	0.63	-1.1
2,213,810	-		DDA3937_RS09805	0.63	+0.1
2,213,829	-		DDA3937_RS09805	0.66	+0.5
2,213,887	+		DDA3937_RS09805	0.74	+0.3
2,213,887	+		DDA3937_RS09805	0.74	-0.7
2,213,887	+		DDA3937_RS09805	0.74	-2.1
2,213,950	-		DDA3937_RS09805	0.82	-0.4
2,213,999	+		DDA3937_RS09805	0.89	-0.4
2,213,999	+		DDA3937_RS09805	0.89	-0.3
2,213,999	+		DDA3937_RS09805	0.89	+0.8
2,213,999	+		DDA3937_RS09805	0.89	-0.2
2,214,000	-		DDA3937_RS09805	0.89	+0.2