Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08815

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,992,123	+		DDA3937_RS08810	0.54	+0.0
1,992,142	+		DDA3937_RS08810	0.57	-0.6
1,992,143	-		DDA3937_RS08810	0.57	-0.9
1,992,143	-		DDA3937_RS08810	0.57	+0.1
1,992,143	-		DDA3937_RS08810	0.57	+0.6
1,992,145	+		DDA3937_RS08810	0.57	-0.9
1,992,271	+		DDA3937_RS08810	0.74	-0.3
1,992,272	-		DDA3937_RS08810	0.74	-0.2
1,992,272	-		DDA3937_RS08810	0.74	+0.0
1,992,328	+		DDA3937_RS08810	0.82	+0.2
1,992,328	+		DDA3937_RS08810	0.82	-0.6
1,992,328	+		DDA3937_RS08810	0.82	+0.9
1,992,328	+		DDA3937_RS08810	0.82	-1.1
1,992,328	+		DDA3937_RS08810	0.82	-0.1
1,992,329	-		DDA3937_RS08810	0.82	+0.6
1,992,454	-				-0.6
1,992,489	+				+0.4
1,992,490	-				-0.8
1,992,490	-				-3.0
1,992,491	+				-1.6
1,992,491	+				-1.3
1,992,491	+				-1.3
1,992,491	+				+0.4
1,992,491	+				+0.1
1,992,491	+				-0.7
1,992,491	+				-1.6
1,992,491	+				+0.2
1,992,492	-				+0.4
1,992,492	-				-2.4
1,992,492	-				+0.1
1,992,493	+				-0.3
1,992,494	-				+0.2
1,992,494	-				-1.7
1,992,643	+				-1.6
1,992,643	+				-0.6
1,992,644	-				-0.7
1,992,656	+				+0.3
1,992,656	+				+0.4
1,992,656	+				-0.6
1,992,656	+				+0.0
1,992,656	+				-2.6
1,992,656	+				-0.2
1,992,657	-				-1.1
1,992,657	-				-0.5
1,992,657	-				-0.6
1,992,657	-				+1.0
1,992,657	-				+1.6
1,992,657	-				+0.4
1,992,657	-				-0.3
1,992,660	-				+0.1
1,992,683	+				-0.8
1,992,698	+				-0.1
1,992,698	+				-0.7
1,992,699	-				-2.2
1,992,704	+				-0.2
1,992,704	+				-0.6
1,992,704	+				-0.5
1,992,704	+				-0.3
1,992,705	-				-0.6
1,992,737	+				-0.6
1,992,737	+				+0.2
1,992,737	+				+0.1
1,992,737	+				+0.3
1,992,737	+				-1.6
1,992,753	+				-2.6
1,992,753	+				-1.0
1,992,753	+				+0.1
1,992,753	+				-0.0
1,992,754	-				-0.4
1,992,836	+				-1.6
1,992,994	-				-0.7
1,993,027	+		DDA3937_RS08815	0.13	-1.2
1,993,281	-		DDA3937_RS08815	0.63	+0.4
1,993,345	+		DDA3937_RS08815	0.76	-0.6
1,993,391	-		DDA3937_RS08815	0.85	-1.3
1,993,423	+				-0.1
1,993,459	+				+0.4
1,993,460	-				+0.4
1,993,465	+				+0.6
1,993,465	+				-0.4
1,993,466	-				-1.0
1,993,466	-				-1.0
1,993,466	-				+0.3
1,993,466	-				-0.6
1,993,468	+				-0.4
1,993,468	+				-0.2
1,993,469	-				-0.6
1,993,469	-				-0.4
1,993,469	-				+0.4
1,993,471	+				-1.4
1,993,472	-				-0.3
1,993,481	-				-0.4
1,993,527	+				+0.7
1,993,591	+				-0.2
1,993,617	-				-0.7
1,993,617	-				-1.6
1,993,620	+				+0.4
1,993,620	+				-1.4
1,993,639	+				-1.2
1,993,848	-				-0.6
1,993,994	+				+0.4
1,993,997	+				-0.7
1,993,998	-				-0.3
1,993,998	-				+0.1
1,993,998	-				-0.2
1,994,179	-		DDA3937_RS08820	0.28	+0.5
1,994,180	+		DDA3937_RS08820	0.28	-0.2
1,994,181	-		DDA3937_RS08820	0.28	-0.5
1,994,181	-		DDA3937_RS08820	0.28	-0.2
1,994,181	-		DDA3937_RS08820	0.28	-0.4
1,994,184	+		DDA3937_RS08820	0.28	+0.0
1,994,184	+		DDA3937_RS08820	0.28	-1.0
1,994,185	-		DDA3937_RS08820	0.29	-0.8
1,994,195	+		DDA3937_RS08820	0.30	-0.8
1,994,196	-		DDA3937_RS08820	0.30	+0.3
1,994,209	-		DDA3937_RS08820	0.31	-0.6
1,994,248	+		DDA3937_RS08820	0.36	+0.2
1,994,248	+		DDA3937_RS08820	0.36	+0.0
1,994,248	+		DDA3937_RS08820	0.36	+0.6
1,994,248	+		DDA3937_RS08820	0.36	+0.4
1,994,248	+		DDA3937_RS08820	0.36	+0.6
1,994,249	-		DDA3937_RS08820	0.36	+0.4
1,994,327	+		DDA3937_RS08820	0.45	+1.0
1,994,327	+		DDA3937_RS08820	0.45	-0.9
1,994,327	+		DDA3937_RS08820	0.45	-0.3
1,994,327	+		DDA3937_RS08820	0.45	-0.2
1,994,327	+		DDA3937_RS08820	0.45	+0.8
1,994,328	-		DDA3937_RS08820	0.45	-0.7
1,994,329	+		DDA3937_RS08820	0.45	-0.2
1,994,329	+		DDA3937_RS08820	0.45	+0.6
1,994,330	-		DDA3937_RS08820	0.45	-0.2
1,994,330	-		DDA3937_RS08820	0.45	-1.2