Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16965

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,856,967	+		DDA3937_RS16960	0.49	+0.1
3,856,968	-		DDA3937_RS16960	0.49	-0.7
3,856,969	+		DDA3937_RS16960	0.49	+0.2
3,856,969	+		DDA3937_RS16960	0.49	-0.2
3,856,969	+		DDA3937_RS16960	0.49	+0.3
3,856,970	-		DDA3937_RS16960	0.49	-0.1
3,856,970	-		DDA3937_RS16960	0.49	+0.2
3,856,970	-		DDA3937_RS16960	0.49	-0.5
3,856,981	+		DDA3937_RS16960	0.50	-0.4
3,856,982	-		DDA3937_RS16960	0.50	-0.1
3,856,982	-		DDA3937_RS16960	0.50	-1.2
3,856,982	-		DDA3937_RS16960	0.50	+0.1
3,857,087	+		DDA3937_RS16960	0.58	+0.0
3,857,088	-		DDA3937_RS16960	0.58	-0.0
3,857,088	-		DDA3937_RS16960	0.58	-0.5
3,857,221	-		DDA3937_RS16960	0.68	+0.8
3,857,226	+		DDA3937_RS16960	0.69	-0.6
3,857,226	+		DDA3937_RS16960	0.69	-0.7
3,857,227	-		DDA3937_RS16960	0.69	+0.9
3,857,227	-		DDA3937_RS16960	0.69	-0.1
3,857,336	+		DDA3937_RS16960	0.77	+2.2
3,857,337	-		DDA3937_RS16960	0.77	+1.3
3,857,337	-		DDA3937_RS16960	0.77	-1.0
3,857,337	-				-2.0
3,857,370	+		DDA3937_RS16960	0.79	-1.2
3,857,370	+		DDA3937_RS16960	0.79	+0.3
3,857,371	-		DDA3937_RS16960	0.79	-0.0
3,857,408	+		DDA3937_RS16960	0.82	-0.5
3,857,409	-		DDA3937_RS16960	0.82	+0.3
3,857,409	-		DDA3937_RS16960	0.82	+0.1
3,857,469	-		DDA3937_RS16960	0.87	-0.3
3,857,469	-		DDA3937_RS16960	0.87	-0.5
3,857,469	-		DDA3937_RS16960	0.87	+0.3
3,857,679	-				+0.3
3,857,739	-				+0.3
3,857,739	-				+0.1
3,857,846	+		DDA3937_RS16965	0.19	-0.7
3,857,847	-		DDA3937_RS16965	0.20	-1.0
3,857,847	-		DDA3937_RS16965	0.20	-0.3
3,857,913	+		DDA3937_RS16965	0.37	+0.7
3,857,913	+		DDA3937_RS16965	0.37	-0.1
3,857,913	+		DDA3937_RS16965	0.37	+0.3
3,857,913	+		DDA3937_RS16965	0.37	-1.2
3,857,914	-		DDA3937_RS16965	0.38	-0.7
3,857,915	+		DDA3937_RS16965	0.38	+0.0
3,858,031	+		DDA3937_RS16965	0.69	-0.9
3,858,076	+		DDA3937_RS16965	0.82	-0.9
3,858,077	-		DDA3937_RS16965	0.82	-1.6
3,858,080	-		DDA3937_RS16965	0.83	-1.6
3,858,123	+				+0.3
3,858,199	+				+0.3
3,858,200	-				+0.5
3,858,200	-				-0.0
3,858,200	-				-1.6
3,858,563	+		DDA3937_RS16970	0.57	-0.3
3,858,564	-		DDA3937_RS16970	0.57	+0.1
3,858,605	-		DDA3937_RS16970	0.63	+0.5
3,858,605	-		DDA3937_RS16970	0.63	+1.2
3,858,605	-		DDA3937_RS16970	0.63	+0.5
3,858,677	+		DDA3937_RS16970	0.74	-0.4
3,858,749	+		DDA3937_RS16970	0.84	-0.0
3,858,749	+		DDA3937_RS16970	0.84	+1.3
3,858,749	+		DDA3937_RS16970	0.84	+0.1
3,858,750	-		DDA3937_RS16970	0.84	+0.1
3,858,886	+				-1.4
3,858,887	-				-0.2
3,858,887	-				-0.7
3,858,931	-				+1.4
3,858,983	+				-0.8
3,859,004	+				-0.1
3,859,004	+				+0.4
3,859,005	-				-0.0
3,859,012	+				+0.7
3,859,012	+				-1.3
3,859,012	+				+0.8
3,859,012	+				-0.9
3,859,013	-				-0.9
3,859,013	-				-0.4
3,859,013	-				+0.8
3,859,013	-				-0.7
3,859,018	+				+0.5
3,859,031	+				-0.5
3,859,031	+				-1.3
3,859,032	-				-0.7
3,859,038	-				+0.2
3,859,038	-				+0.7
3,859,046	-				-0.2
3,859,055	+				-0.5
3,859,055	+				+0.8
3,859,055	+				-1.6
3,859,056	-				+1.4
3,859,056	-				-0.2
3,859,067	-				-1.6
3,859,099	+				-0.2
3,859,099	+				-0.2
3,859,100	-				-0.4