Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14040

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,206,320	+		DDA3937_RS14035	0.67	-0.9
3,206,320	+		DDA3937_RS14035	0.67	-0.2
3,206,320	+		DDA3937_RS14035	0.67	-1.8
3,206,320	+		DDA3937_RS14035	0.67	+0.4
3,206,320	+		DDA3937_RS14035	0.67	+0.3
3,206,321	-		DDA3937_RS14035	0.68	+0.1
3,206,321	-		DDA3937_RS14035	0.68	+0.6
3,206,321	-		DDA3937_RS14035	0.68	+0.1
3,206,321	-		DDA3937_RS14035	0.68	+0.6
3,206,321	-		DDA3937_RS14035	0.68	+0.4
3,206,402	+		DDA3937_RS14035	0.73	+0.4
3,206,403	-		DDA3937_RS14035	0.73	+1.1
3,206,410	+		DDA3937_RS14035	0.73	+0.6
3,206,411	-		DDA3937_RS14035	0.73	+1.2
3,206,482	+		DDA3937_RS14035	0.78	+1.1
3,206,539	+		DDA3937_RS14035	0.81	-0.2
3,206,539	+		DDA3937_RS14035	0.81	-0.2
3,206,539	+		DDA3937_RS14035	0.81	+1.5
3,206,539	+		DDA3937_RS14035	0.81	+0.5
3,206,540	-		DDA3937_RS14035	0.81	+1.8
3,206,615	+		DDA3937_RS14035	0.86	+0.3
3,206,616	-		DDA3937_RS14035	0.86	-0.2
3,206,616	-		DDA3937_RS14035	0.86	-1.3
3,206,649	-		DDA3937_RS14035	0.88	-0.2
3,206,649	-		DDA3937_RS14035	0.88	+0.6
3,206,723	-				+0.1
3,206,723	-				-1.8
3,206,723	-				+0.2
3,206,723	-				+0.8
3,206,781	-				+0.1
3,206,820	+				-0.1
3,206,821	-				-0.6
3,206,878	+				+0.3
3,206,878	+				-0.5
3,206,878	+				-1.5
3,206,878	+				-0.0
3,206,878	+				-0.5
3,206,878	+				-0.2
3,206,878	+				-0.6
3,206,878	+				-0.8
3,206,878	+				+0.9
3,206,879	-				+0.9
3,206,879	-				-0.2
3,206,898	+				+0.4
3,206,898	+				+0.2
3,206,899	-				+0.2
3,206,899	-				+0.3
3,206,899	-				+0.7
3,206,935	-				-0.7
3,206,950	-				-1.1
3,207,069	+				-0.1
3,207,069	+				+2.0
3,207,070	-				+0.3
3,207,070	-				-0.1
3,207,077	+				+0.1
3,207,125	-				+0.1
3,207,150	-				-0.3
3,207,179	+				+0.5
3,207,262	-				-1.3
3,207,459	-				-0.2
3,207,468	+		DDA3937_RS14040	0.25	+1.6
3,207,468	+		DDA3937_RS14040	0.25	+0.5
3,207,468	+		DDA3937_RS14040	0.25	+2.2
3,207,468	+		DDA3937_RS14040	0.25	-0.1
3,207,468	+				+0.2
3,207,468	+		DDA3937_RS14040	0.25	-0.5
3,207,468	+		DDA3937_RS14040	0.25	+0.1
3,207,468	+		DDA3937_RS14040	0.25	+0.2
3,207,469	-		DDA3937_RS14040	0.25	+0.1
3,207,469	-		DDA3937_RS14040	0.25	-0.1
3,207,469	-		DDA3937_RS14040	0.25	-0.1
3,207,511	+		DDA3937_RS14040	0.29	-0.4
3,207,512	-		DDA3937_RS14040	0.29	+1.1
3,207,559	+		DDA3937_RS14040	0.34	+0.2
3,207,560	-		DDA3937_RS14040	0.34	+0.1
3,207,560	-		DDA3937_RS14040	0.34	+0.3
3,207,588	+		DDA3937_RS14040	0.36	+0.1
3,207,589	-		DDA3937_RS14040	0.37	-2.2
3,207,592	+		DDA3937_RS14040	0.37	+1.6
3,207,619	+		DDA3937_RS14040	0.40	-0.2
3,207,619	+		DDA3937_RS14040	0.40	-0.4
3,207,620	-		DDA3937_RS14040	0.40	-0.5
3,207,724	+		DDA3937_RS14040	0.50	+0.4
3,207,724	+		DDA3937_RS14040	0.50	-1.7
3,207,724	+				-0.4
3,207,724	+		DDA3937_RS14040	0.50	+0.9
3,207,724	+		DDA3937_RS14040	0.50	-0.5
3,207,724	+		DDA3937_RS14040	0.50	+0.6
3,207,725	-		DDA3937_RS14040	0.50	+0.1
3,207,725	-		DDA3937_RS14040	0.50	+0.1
3,207,725	-		DDA3937_RS14040	0.50	-0.2
3,207,729	+		DDA3937_RS14040	0.50	-0.4
3,207,729	+		DDA3937_RS14040	0.50	-1.1
3,207,729	+		DDA3937_RS14040	0.50	+0.3
3,207,730	-		DDA3937_RS14040	0.50	+1.0
3,207,730	-		DDA3937_RS14040	0.50	-1.4
3,207,730	-		DDA3937_RS14040	0.50	+0.6
3,207,730	-		DDA3937_RS14040	0.50	+0.8
3,207,730	-		DDA3937_RS14040	0.50	+0.2
3,207,830	-		DDA3937_RS14040	0.60	-0.6
3,207,861	+		DDA3937_RS14040	0.63	-0.7
3,207,861	+		DDA3937_RS14040	0.63	-0.0
3,207,862	-		DDA3937_RS14040	0.63	+0.2
3,207,862	-		DDA3937_RS14040	0.63	-0.4
3,207,891	+		DDA3937_RS14040	0.66	+0.6
3,207,892	-		DDA3937_RS14040	0.66	-0.4
3,208,134	+				+0.3
3,208,134	+				+0.6
3,208,170	+				-0.7
3,208,170	+				-0.1
3,208,170	+				-1.9
3,208,170	+				+0.2
3,208,170	+				-2.2
3,208,171	-				+0.1
3,208,173	+				-0.2
3,208,174	-				-0.2
3,208,174	-				+1.2
3,208,205	+				-0.5
3,208,206	-				+0.1
3,208,206	-				-0.0
3,208,324	+		DDA3937_RS14045	0.11	-0.8
3,208,324	+		DDA3937_RS14045	0.11	-0.0
3,208,324	+		DDA3937_RS14045	0.11	-2.4
3,208,324	+		DDA3937_RS14045	0.11	-1.1
3,208,324	+		DDA3937_RS14045	0.11	+0.2
3,208,327	+		DDA3937_RS14045	0.11	-0.0
3,208,327	+		DDA3937_RS14045	0.11	+0.8
3,208,327	+		DDA3937_RS14045	0.11	+0.2
3,208,328	-		DDA3937_RS14045	0.12	-0.9
3,208,639	-		DDA3937_RS14045	0.46	+0.3
3,208,766	+		DDA3937_RS14045	0.60	-0.1
3,208,922	+		DDA3937_RS14045	0.78	-0.4
3,208,941	+		DDA3937_RS14045	0.80	-0.3
3,208,941	+		DDA3937_RS14045	0.80	+0.1
3,209,115	-				-0.3
3,209,167	+				-0.3
3,209,167	+				-0.5
3,209,168	-				-0.1
3,209,168	-				-0.9
3,209,168	-				+0.1
3,209,172	-				+1.4