Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS12465

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,836,198	+		DDA3937_RS12460	0.13	-2.2
2,836,199	-		DDA3937_RS12460	0.13	-2.1
2,836,340	+		DDA3937_RS12460	0.30	-1.6
2,836,341	-		DDA3937_RS12460	0.30	-1.5
2,836,529	+				-1.7
2,836,529	+		DDA3937_RS12460	0.53	+1.1
2,836,529	+		DDA3937_RS12460	0.53	-2.1
2,836,530	-				+0.5
2,836,530	-		DDA3937_RS12460	0.53	+0.7
2,836,639	+		DDA3937_RS12460	0.67	-1.7
2,836,696	+		DDA3937_RS12460	0.74	-1.5
2,836,703	+		DDA3937_RS12460	0.75	-1.3
2,836,703	+		DDA3937_RS12460	0.75	-0.6
2,836,703	+				-3.0
2,836,703	+		DDA3937_RS12460	0.75	-2.8
2,836,704	-		DDA3937_RS12460	0.75	+0.5
2,836,704	-		DDA3937_RS12460	0.75	-1.1
2,836,704	-		DDA3937_RS12460	0.75	-2.3
2,836,704	-				-0.1
2,836,705	+		DDA3937_RS12460	0.75	-1.5
2,836,709	+		DDA3937_RS12460	0.75	-0.9
2,836,709	+		DDA3937_RS12460	0.75	-0.3
2,836,709	+		DDA3937_RS12460	0.75	-1.3
2,836,709	+		DDA3937_RS12460	0.75	-2.3
2,836,709	+				-0.3
2,836,709	+		DDA3937_RS12460	0.75	-1.1
2,836,709	+		DDA3937_RS12460	0.75	-1.8
2,836,709	+		DDA3937_RS12460	0.75	-2.1
2,836,709	+		DDA3937_RS12460	0.75	-1.5
2,836,709	+		DDA3937_RS12460	0.75	+1.5
2,836,709	+		DDA3937_RS12460	0.75	+0.5
2,836,710	-		DDA3937_RS12460	0.75	-0.7
2,836,710	-				-1.1
2,836,710	-		DDA3937_RS12460	0.75	+1.1
2,836,933	+				+0.1
2,836,934	-				+0.4
2,836,934	-				-0.8
2,836,946	+				-0.0
2,836,946	+				+0.1
2,836,947	-				-0.1
2,836,963	+				+0.5
2,836,963	+				+0.1
2,836,963	+				-0.5
2,836,963	+				+0.7
2,836,964	-				-0.5
2,836,964	-				+1.2
2,836,964	-				-1.8
2,836,964	-				-0.0
2,836,964	-				-1.5
2,836,970	+				-1.5
2,837,007	+				-0.8
2,837,007	+				-1.5
2,837,007	+				+0.5
2,837,907	-				+1.0
2,837,991	+				+0.7
2,838,167	+		DDA3937_RS12470	0.22	+0.5
2,838,167	+		DDA3937_RS12470	0.22	+0.6
2,838,168	-		DDA3937_RS12470	0.22	-0.8
2,838,168	-		DDA3937_RS12470	0.22	-0.7
2,838,168	-		DDA3937_RS12470	0.22	+0.0
2,838,168	-		DDA3937_RS12470	0.22	-0.1
2,838,168	-				+1.5
2,838,168	-		DDA3937_RS12470	0.22	-1.2
2,838,168	-		DDA3937_RS12470	0.22	-0.5
2,838,168	-		DDA3937_RS12470	0.22	-1.2
2,838,179	+		DDA3937_RS12470	0.23	+0.1
2,838,180	-		DDA3937_RS12470	0.23	+1.2
2,838,180	-		DDA3937_RS12470	0.23	-0.7
2,838,210	-		DDA3937_RS12470	0.26	-0.5
2,838,252	+		DDA3937_RS12470	0.31	-0.1
2,838,253	-		DDA3937_RS12470	0.31	-1.0
2,838,295	+		DDA3937_RS12470	0.36	+0.2
2,838,360	+		DDA3937_RS12470	0.43	-0.5
2,838,361	-		DDA3937_RS12470	0.43	+0.0
2,838,361	-		DDA3937_RS12470	0.43	+0.7
2,838,361	-		DDA3937_RS12470	0.43	+0.8
2,838,361	-		DDA3937_RS12470	0.43	-0.2
2,838,361	-		DDA3937_RS12470	0.43	-0.5
2,838,361	-		DDA3937_RS12470	0.43	-0.7
2,838,467	-		DDA3937_RS12470	0.55	-0.1
2,838,503	+		DDA3937_RS12470	0.59	-0.1
2,838,504	-		DDA3937_RS12470	0.59	-0.3
2,838,510	+		DDA3937_RS12470	0.60	-0.5
2,838,548	+		DDA3937_RS12470	0.64	+1.8
2,838,590	-		DDA3937_RS12470	0.69	-0.7
2,838,590	-		DDA3937_RS12470	0.69	-0.7
2,838,648	+		DDA3937_RS12470	0.75	-0.5
2,838,648	+		DDA3937_RS12470	0.75	-2.8
2,838,648	+		DDA3937_RS12470	0.75	+0.5
2,838,648	+		DDA3937_RS12470	0.75	-2.6
2,838,649	-		DDA3937_RS12470	0.75	-0.3
2,838,649	-		DDA3937_RS12470	0.75	+0.9
2,838,849	+				-1.1
2,838,850	-				-0.6
2,838,850	-				+0.6