Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07740

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,747,910	+		DDA3937_RS07735	0.47	-0.4
1,747,910	+		DDA3937_RS07735	0.47	-0.0
1,747,910	+		DDA3937_RS07735	0.47	-1.1
1,747,910	+		DDA3937_RS07735	0.47	-0.4
1,747,911	-		DDA3937_RS07735	0.47	-0.6
1,747,944	+		DDA3937_RS07735	0.49	+0.9
1,747,944	+		DDA3937_RS07735	0.49	+0.2
1,747,944	+		DDA3937_RS07735	0.49	+0.7
1,747,944	+		DDA3937_RS07735	0.49	+1.3
1,747,945	-		DDA3937_RS07735	0.49	-0.9
1,747,945	-		DDA3937_RS07735	0.49	+0.4
1,747,945	-		DDA3937_RS07735	0.49	-1.0
1,747,945	-		DDA3937_RS07735	0.49	+0.3
1,748,009	-		DDA3937_RS07735	0.53	+0.4
1,748,158	-		DDA3937_RS07735	0.61	-0.2
1,748,200	-		DDA3937_RS07735	0.63	-0.1
1,748,204	-		DDA3937_RS07735	0.63	+0.0
1,748,204	-		DDA3937_RS07735	0.63	-0.7
1,748,204	-		DDA3937_RS07735	0.63	-0.8
1,748,668	-		DDA3937_RS07735	0.88	+0.6
1,748,784	+				-0.0
1,748,784	+				-0.1
1,748,785	-				-0.7
1,748,785	-				+0.9
1,748,840	+				+0.5
1,748,841	-				-0.2
1,748,886	+				+0.2
1,748,886	+				-1.3
1,748,887	-				+1.1
1,748,887	-				+0.8
1,748,908	+				+1.2
1,748,908	+				+1.2
1,748,908	+				-0.4
1,748,909	-				+0.7
1,748,933	+				+0.7
1,748,934	-				-0.7
1,748,934	-				+1.6
1,749,074	+		DDA3937_RS07740	0.25	+0.2
1,749,075	-		DDA3937_RS07740	0.25	-0.7
1,749,075	-		DDA3937_RS07740	0.25	-0.3
1,749,287	+		DDA3937_RS07740	0.52	-1.2
1,749,287	+		DDA3937_RS07740	0.52	-0.0
1,749,287	+		DDA3937_RS07740	0.52	-0.7
1,749,287	+		DDA3937_RS07740	0.52	-0.7
1,749,288	-		DDA3937_RS07740	0.52	-0.3
1,749,288	-		DDA3937_RS07740	0.52	-0.9
1,749,512	+		DDA3937_RS07740	0.81	-0.7
1,749,513	-		DDA3937_RS07740	0.81	+0.1
1,749,615	+				-1.6
1,749,615	+				+0.6
1,749,616	-				-0.3
1,749,671	+				-0.0
1,749,671	+				+0.3
1,749,671	+				-0.0
1,749,671	+				-0.0
1,749,671	+				-0.2
1,749,672	-				+0.6
1,749,672	-				+0.6
1,749,672	-				-1.0
1,749,672	-				-0.0
1,749,711	+				-0.4
1,749,711	+				-0.0
1,749,799	-				+0.4
1,749,972	+		DDA3937_RS07745	0.15	-0.6
1,749,973	-		DDA3937_RS07745	0.15	+0.6
1,750,025	+		DDA3937_RS07745	0.18	+0.0
1,750,026	-		DDA3937_RS07745	0.18	+1.8
1,750,026	-		DDA3937_RS07745	0.18	-0.3
1,750,080	-		DDA3937_RS07745	0.21	-0.4
1,750,080	-		DDA3937_RS07745	0.21	-0.4
1,750,080	-		DDA3937_RS07745	0.21	-0.9
1,750,080	-		DDA3937_RS07745	0.21	-0.0
1,750,302	+		DDA3937_RS07745	0.32	+0.2
1,750,303	-		DDA3937_RS07745	0.32	-1.2
1,750,311	+		DDA3937_RS07745	0.33	-1.2
1,750,311	+		DDA3937_RS07745	0.33	+0.6
1,750,311	+		DDA3937_RS07745	0.33	-0.4
1,750,312	-		DDA3937_RS07745	0.33	-0.9
1,750,422	+		DDA3937_RS07745	0.39	+0.4
1,750,422	+		DDA3937_RS07745	0.39	+0.2
1,750,422	+		DDA3937_RS07745	0.39	+0.8
1,750,656	+		DDA3937_RS07745	0.51	-0.6
1,750,656	+		DDA3937_RS07745	0.51	-1.0