Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS18805

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,296,211	-		DDA3937_RS18800	0.62	+0.6
4,296,240	+		DDA3937_RS18800	0.64	+1.3
4,296,240	+				+2.1
4,296,240	+		DDA3937_RS18800	0.64	+1.1
4,296,241	-		DDA3937_RS18800	0.64	+0.3
4,296,241	-		DDA3937_RS18800	0.64	-0.2
4,296,241	-		DDA3937_RS18800	0.64	-0.1
4,296,241	-		DDA3937_RS18800	0.64	-0.1
4,296,359	+		DDA3937_RS18800	0.72	-0.0
4,296,359	+		DDA3937_RS18800	0.72	+0.2
4,296,359	+		DDA3937_RS18800	0.72	+0.2
4,296,359	+		DDA3937_RS18800	0.72	-0.4
4,296,359	+		DDA3937_RS18800	0.72	-0.7
4,296,359	+		DDA3937_RS18800	0.72	-0.1
4,296,359	+		DDA3937_RS18800	0.72	-0.0
4,296,359	+		DDA3937_RS18800	0.72	+0.4
4,296,359	+		DDA3937_RS18800	0.72	-1.0
4,296,359	+		DDA3937_RS18800	0.72	+0.3
4,296,360	-		DDA3937_RS18800	0.72	+1.0
4,296,360	-		DDA3937_RS18800	0.72	-0.5
4,296,360	-		DDA3937_RS18800	0.72	+0.1
4,296,360	-		DDA3937_RS18800	0.72	-0.0
4,296,360	-		DDA3937_RS18800	0.72	-0.3
4,296,418	+		DDA3937_RS18800	0.76	+0.5
4,296,564	+		DDA3937_RS18800	0.87	-1.4
4,296,564	+		DDA3937_RS18800	0.87	+0.8
4,296,564	+		DDA3937_RS18800	0.87	+0.7
4,296,564	+		DDA3937_RS18800	0.87	-0.3
4,296,565	-		DDA3937_RS18800	0.87	+0.0
4,296,580	-		DDA3937_RS18800	0.88	-0.9
4,296,622	+				+0.5
4,296,622	+				-1.1
4,296,630	+				-0.3
4,296,631	-				+0.5
4,296,631	-				-0.6
4,296,759	+				-0.8
4,296,759	+				+0.3
4,296,759	+				-0.4
4,296,800	+				+1.7
4,296,904	+				-0.3
4,296,904	+				-1.2
4,296,905	-				+0.2
4,296,905	-				-0.3
4,296,952	+				+0.7
4,296,952	+				+0.5
4,296,952	+				+0.7
4,296,952	+				+0.8
4,296,952	+				-0.1
4,296,953	-				-0.6
4,296,953	-				-0.5
4,297,031	+				-1.5
4,297,031	+				+0.3
4,297,031	+				-0.1
4,297,031	+				+0.5
4,297,032	-				+0.6
4,297,032	-				-0.0
4,297,043	+				-0.5
4,297,235	+		DDA3937_RS18805	0.14	+1.0
4,297,333	+				-1.0
4,297,334	-		DDA3937_RS18805	0.20	+0.1
4,297,334	-		DDA3937_RS18805	0.20	-0.3
4,297,487	-		DDA3937_RS18805	0.30	+0.2
4,297,487	-		DDA3937_RS18805	0.30	-0.4
4,297,489	+		DDA3937_RS18805	0.30	-0.6
4,297,489	+		DDA3937_RS18805	0.30	+0.5
4,297,489	+		DDA3937_RS18805	0.30	-0.3
4,297,490	-		DDA3937_RS18805	0.30	+0.5
4,297,709	+		DDA3937_RS18805	0.44	-0.3
4,297,709	+		DDA3937_RS18805	0.44	-0.8
4,297,834	+		DDA3937_RS18805	0.52	+0.5
4,297,835	-		DDA3937_RS18805	0.52	-1.4
4,297,898	+		DDA3937_RS18805	0.56	+0.1
4,297,899	-		DDA3937_RS18805	0.56	-0.1
4,297,899	-		DDA3937_RS18805	0.56	+0.1
4,297,912	-		DDA3937_RS18805	0.57	-0.0
4,298,129	-		DDA3937_RS18805	0.71	+0.8
4,298,218	+		DDA3937_RS18805	0.76	-0.3
4,298,218	+		DDA3937_RS18805	0.76	-1.1
4,298,219	-		DDA3937_RS18805	0.76	+1.7
4,298,407	+		DDA3937_RS18805	0.88	-1.6
4,298,407	+		DDA3937_RS18805	0.88	-0.0
4,298,407	+		DDA3937_RS18805	0.88	+0.2
4,298,407	+		DDA3937_RS18805	0.88	-0.9
4,298,407	+				+0.6
4,298,432	+				-1.1
4,298,433	-				-0.0
4,298,433	-				+0.1
4,298,433	-				-0.1
4,298,557	-				-1.0
4,298,557	-				-0.5
4,298,712	-				-1.4
4,298,802	+		DDA3937_RS18810	0.14	+0.5
4,298,802	+		DDA3937_RS18810	0.14	+0.8
4,298,803	-		DDA3937_RS18810	0.14	+1.0
4,298,839	-		DDA3937_RS18810	0.17	+0.7
4,298,923	+		DDA3937_RS18810	0.22	-0.2
4,299,039	+		DDA3937_RS18810	0.30	-1.0
4,299,039	+		DDA3937_RS18810	0.30	-0.9
4,299,039	+		DDA3937_RS18810	0.30	-0.3
4,299,123	-		DDA3937_RS18810	0.35	+0.4
4,299,399	+		DDA3937_RS18810	0.53	-0.0
4,299,576	+		DDA3937_RS18810	0.65	+0.4
4,299,577	-		DDA3937_RS18810	0.65	-0.3
4,299,577	-		DDA3937_RS18810	0.65	+1.2