Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16605

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,781,160	+		DDA3937_RS16600	0.55	-1.4
3,781,162	+		DDA3937_RS16600	0.55	+0.5
3,781,162	+		DDA3937_RS16600	0.55	+0.3
3,781,162	+				+0.8
3,781,162	+		DDA3937_RS16600	0.55	+0.3
3,781,163	-		DDA3937_RS16600	0.55	+1.1
3,781,163	-		DDA3937_RS16600	0.55	+0.3
3,781,163	-		DDA3937_RS16600	0.55	-0.8
3,781,214	+		DDA3937_RS16600	0.59	-0.5
3,781,215	-		DDA3937_RS16600	0.59	+0.9
3,781,256	-		DDA3937_RS16600	0.63	-0.7
3,781,291	+		DDA3937_RS16600	0.65	+1.2
3,781,291	+		DDA3937_RS16600	0.65	+1.9
3,781,291	+		DDA3937_RS16600	0.65	-0.3
3,781,291	+		DDA3937_RS16600	0.65	-1.0
3,781,424	+		DDA3937_RS16600	0.76	-0.2
3,781,438	+		DDA3937_RS16600	0.78	+0.2
3,781,439	-		DDA3937_RS16600	0.78	+2.5
3,781,439	-		DDA3937_RS16600	0.78	+0.1
3,781,522	+		DDA3937_RS16600	0.85	+0.4
3,781,522	+		DDA3937_RS16600	0.85	-1.0
3,781,663	+				-0.5
3,781,664	-				-1.0
3,781,697	-				-0.1
3,781,697	-				-0.4
3,781,720	+				-0.1
3,781,720	+				+0.3
3,781,721	-				+0.4
3,781,721	-				-1.2
3,781,724	+				+0.2
3,781,724	+				-0.3
3,781,724	+				+0.8
3,781,724	+				-0.4
3,781,724	+				+0.6
3,781,724	+				+0.1
3,781,725	-				-0.3
3,781,725	-				+0.0
3,781,725	-				-0.0
3,781,725	-				-1.1
3,781,725	-				+0.3
3,781,725	-				-0.1
3,781,725	-				+0.2
3,781,725	-				-0.9
3,781,725	-				+0.2
3,781,725	-				+1.2
3,781,725	-				-1.2
3,781,728	+				-0.7
3,781,728	+				+1.0
3,781,728	+				-0.1
3,781,728	+				+0.9
3,781,728	+				+0.2
3,781,728	+				-0.4
3,781,728	+				-0.4
3,781,729	-				+0.4
3,781,729	-				-0.2
3,781,729	-				+0.0
3,781,729	-				-0.4
3,781,729	-				+1.5
3,781,729	-				-0.2
3,781,729	-				+0.3
3,781,729	-				-0.1
3,781,729	-				+0.4
3,781,729	-				-0.0
3,781,729	-				-0.8
3,781,760	+				+0.2
3,781,760	+				+0.3
3,781,761	-				-0.2
3,781,771	+				-0.6
3,781,772	-				-0.4
3,781,818	+				-2.2
3,781,826	+				-0.4
3,781,826	+				-0.0
3,781,827	-				+1.8
3,781,827	-				-0.4
3,781,827	-				-1.0
3,781,827	-				-0.2
3,781,874	+				-0.8
3,781,874	+				-0.2
3,781,874	+				+0.5
3,781,875	-				+0.3
3,781,875	-				+0.3
3,781,875	-				+0.7
3,781,875	-				+0.3
3,781,937	+				-0.2
3,781,937	+				-0.2
3,781,938	-				+1.2
3,781,970	+				-0.4
3,781,970	+				+0.1
3,782,018	-				+0.1
3,782,347	+		DDA3937_RS16605	0.36	-1.2
3,782,347	+		DDA3937_RS16605	0.36	-0.3
3,782,348	-		DDA3937_RS16605	0.36	+0.1
3,782,348	-		DDA3937_RS16605	0.36	+0.1
3,782,365	+		DDA3937_RS16605	0.37	+0.7
3,782,422	+		DDA3937_RS16605	0.43	+0.2
3,782,422	+		DDA3937_RS16605	0.43	+0.1
3,782,422	+		DDA3937_RS16605	0.43	+0.0
3,782,423	-		DDA3937_RS16605	0.43	+1.3
3,782,705	+		DDA3937_RS16605	0.70	-0.0
3,782,706	-		DDA3937_RS16605	0.70	-1.0
3,782,706	-		DDA3937_RS16605	0.70	+1.1
3,782,747	+		DDA3937_RS16605	0.74	-1.0
3,782,747	+		DDA3937_RS16605	0.74	-0.8
3,782,891	+		DDA3937_RS16605	0.88	+0.0
3,782,891	+		DDA3937_RS16605	0.88	+0.3
3,782,892	-		DDA3937_RS16605	0.88	+1.0
3,782,927	-				-0.2
3,782,927	-				-0.7
3,782,984	-				+1.9
3,783,022	+				+0.5
3,783,022	+				+1.5
3,783,022	+				+0.0
3,783,023	-				-0.2
3,783,023	-				+0.1
3,783,023	-				-0.2
3,783,395	-		DDA3937_RS16610	0.57	-2.1
3,783,467	+		DDA3937_RS16610	0.70	+0.1
3,783,468	-		DDA3937_RS16610	0.70	-0.1
3,783,494	+		DDA3937_RS16610	0.75	-0.5
3,783,494	+		DDA3937_RS16610	0.75	+0.5
3,783,495	-		DDA3937_RS16610	0.75	-0.2
3,783,495	-		DDA3937_RS16610	0.75	+0.1
3,783,643	+				+0.1
3,783,644	-				+0.5
3,783,644	-				+0.8
3,783,688	-				-0.4
3,783,740	+		DDA3937_RS16615	0.14	-0.2
3,783,741	-		DDA3937_RS16615	0.14	-0.7
3,783,741	-		DDA3937_RS16615	0.14	-0.5
3,783,741	-		DDA3937_RS16615	0.14	-1.2
3,783,883	+		DDA3937_RS16615	0.35	+1.4
3,783,965	-				-0.7
3,783,970	+		DDA3937_RS16615	0.47	-0.2
3,783,970	+		DDA3937_RS16615	0.47	+0.7
3,783,970	+		DDA3937_RS16615	0.47	-0.4
3,783,970	+		DDA3937_RS16615	0.47	-0.8
3,783,970	+		DDA3937_RS16615	0.47	-0.3
3,783,971	-		DDA3937_RS16615	0.47	+2.1
3,783,971	-		DDA3937_RS16615	0.47	-1.0
3,783,971	-		DDA3937_RS16615	0.47	-1.0
3,783,971	-		DDA3937_RS16615	0.47	-1.4
3,783,971	-		DDA3937_RS16615	0.47	+0.2
3,783,971	-		DDA3937_RS16615	0.47	+0.2
3,783,971	-		DDA3937_RS16615	0.47	-1.8
3,783,971	-		DDA3937_RS16615	0.47	-0.6
3,783,971	-		DDA3937_RS16615	0.47	+0.1
3,783,971	-		DDA3937_RS16615	0.47	-0.6