Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11025

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,486,439	+		DDA3937_RS11020	0.16	-0.9
2,486,439	+		DDA3937_RS11020	0.16	-0.3
2,486,505	+		DDA3937_RS11020	0.24	-0.0
2,486,505	+		DDA3937_RS11020	0.24	-1.1
2,486,506	-		DDA3937_RS11020	0.24	-0.6
2,486,532	+		DDA3937_RS11020	0.27	+0.9
2,486,593	-		DDA3937_RS11020	0.33	-0.5
2,486,593	-		DDA3937_RS11020	0.33	-3.9
2,486,617	+		DDA3937_RS11020	0.36	+0.3
2,486,617	+		DDA3937_RS11020	0.36	-0.7
2,486,618	-		DDA3937_RS11020	0.36	-0.4
2,486,628	+		DDA3937_RS11020	0.37	-0.5
2,486,628	+		DDA3937_RS11020	0.37	+0.2
2,486,629	-		DDA3937_RS11020	0.37	-1.1
2,486,629	-		DDA3937_RS11020	0.37	-0.2
2,486,672	-		DDA3937_RS11020	0.42	-0.9
2,486,674	+		DDA3937_RS11020	0.42	-0.1
2,486,674	+		DDA3937_RS11020	0.42	-0.9
2,486,674	+		DDA3937_RS11020	0.42	-0.1
2,486,675	-		DDA3937_RS11020	0.43	-1.3
2,486,726	-		DDA3937_RS11020	0.48	-0.2
2,486,741	+		DDA3937_RS11020	0.50	-0.9
2,486,741	+		DDA3937_RS11020	0.50	-0.3
2,486,742	-		DDA3937_RS11020	0.50	-0.7
2,486,742	-		DDA3937_RS11020	0.50	-0.6
2,486,742	-		DDA3937_RS11020	0.50	+0.3
2,486,756	-		DDA3937_RS11020	0.51	-1.1
2,486,756	-		DDA3937_RS11020	0.51	-0.5
2,486,823	+		DDA3937_RS11020	0.59	+0.6
2,486,824	-		DDA3937_RS11020	0.59	-1.3
2,486,837	-		DDA3937_RS11020	0.60	-1.3
2,486,869	+		DDA3937_RS11020	0.64	-0.1
2,486,903	+		DDA3937_RS11020	0.68	-0.3
2,486,904	-		DDA3937_RS11020	0.68	-0.2
2,486,904	-		DDA3937_RS11020	0.68	-1.1
2,486,918	-		DDA3937_RS11020	0.69	-1.7
2,486,962	+		DDA3937_RS11020	0.74	+1.3
2,486,983	+		DDA3937_RS11020	0.77	-0.7
2,486,984	-		DDA3937_RS11020	0.77	-0.7
2,486,984	-		DDA3937_RS11020	0.77	-1.0
2,487,020	+		DDA3937_RS11020	0.81	-0.5
2,487,021	-		DDA3937_RS11020	0.81	-2.0
2,487,028	+		DDA3937_RS11020	0.82	-1.9
2,487,028	+		DDA3937_RS11020	0.82	+0.0
2,487,161	-				-0.7
2,487,222	-				-0.3
2,487,258	+				+0.3
2,487,258	+				-2.3
2,487,258	+				-1.1
2,487,258	+				-1.7
2,487,259	-				+0.3
2,487,259	-				-2.5
2,487,259	-				-0.5
2,487,262	-				-0.9
2,487,327	+				-0.3
2,487,327	+				+0.6
2,487,336	+				+1.0
2,487,338	+				+0.2
2,487,338	+				-1.9
2,487,339	-				+0.6
2,487,339	-				+0.4
2,487,339	-				-0.3
2,487,406	-				+0.3
2,487,561	+		DDA3937_RS11025	0.51	-1.2
2,487,562	-		DDA3937_RS11025	0.52	-0.8
2,487,602	-		DDA3937_RS11025	0.67	+0.3
2,487,631	+		DDA3937_RS11025	0.77	-0.1
2,487,632	-		DDA3937_RS11025	0.78	-0.4
2,487,641	-		DDA3937_RS11025	0.81	+0.3
2,487,641	-		DDA3937_RS11025	0.81	-1.3
2,487,641	-		DDA3937_RS11025	0.81	-0.5
2,487,641	-		DDA3937_RS11025	0.81	-0.7
2,487,641	-		DDA3937_RS11025	0.81	-1.6
2,487,644	+		DDA3937_RS11025	0.82	-1.3
2,487,645	-				-0.4
2,487,652	+		DDA3937_RS11025	0.85	-0.5
2,487,656	+		DDA3937_RS11025	0.87	-1.8
2,487,656	+		DDA3937_RS11025	0.87	-1.5
2,487,657	-		DDA3937_RS11025	0.87	-0.5
2,487,657	-				-1.0
2,487,657	-		DDA3937_RS11025	0.87	-0.5
2,487,682	+				-0.1
2,487,691	+				+0.1
2,487,709	-				+0.7
2,487,709	-				+0.3
2,487,753	+				-0.1
2,487,754	-				-1.7
2,487,762	+				-2.5
2,487,762	+				+0.2
2,487,762	+				+0.1
2,487,762	+				+0.5
2,487,763	-				-1.8
2,487,763	-				-0.4
2,487,764	+				+0.3
2,487,765	-				-0.0
2,487,765	-				-0.1
2,487,828	+				-0.9
2,487,849	+				-0.6
2,487,858	-				+0.1
2,487,870	+				+1.1
2,487,871	-				-1.0
2,487,890	-				+0.3
2,487,890	-				-0.1
2,487,904	-				-0.4
2,487,911	+				-0.2
2,487,911	+				+0.3
2,487,912	-				+0.1
2,487,920	+				-0.0
2,488,550	+				-0.0
2,488,550	+				-3.6
2,488,550	+				+0.9
2,488,550	+				-0.4
2,488,550	+				-1.3
2,488,550	+				+0.7
2,488,550	+				+0.3
2,488,550	+				-1.7
2,488,550	+				-1.5
2,488,551	-				-0.1
2,488,551	-				+0.3
2,488,551	-				+1.3
2,488,556	+				-0.7
2,488,556	+				-1.0
2,488,556	+				+0.7
2,488,556	+				-0.3
2,488,556	+				-0.9
2,488,557	-				-0.0
2,488,557	-				+0.3
2,488,558	+				-0.4
2,488,558	+				-0.1
2,488,558	+				+0.1
2,488,559	-				-2.7
2,488,569	-				+0.6
2,488,569	-				-0.2
2,488,621	+				-1.9
2,488,621	+				+0.9
2,488,631	+				-0.4
2,488,641	+				-2.9
2,488,641	+				-2.0