Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS09420

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,122,564	-		DDA3937_RS09415	0.47	+0.5
2,122,585	-		DDA3937_RS09415	0.50	+0.2
2,122,705	+		DDA3937_RS09415	0.65	+1.4
2,122,831	+		DDA3937_RS09415	0.80	+0.4
2,122,906	+		DDA3937_RS09415	0.89	+0.6
2,122,949	+				-0.1
2,122,949	+				+1.2
2,122,965	+				+0.1
2,123,426	-				-1.0
2,123,435	+				-0.0
2,123,436	-				-0.1
2,123,450	+				+0.8
2,123,450	+				+0.1
2,123,450	+				-1.6
2,123,450	+				-0.5
2,123,451	-				+2.0
2,123,451	-				-0.7
2,123,502	+				+2.0
2,123,503	-				-2.8
2,123,523	+				-1.7
2,123,648	-		DDA3937_RS09420	0.11	-1.4
2,123,660	+		DDA3937_RS09420	0.12	-1.6
2,123,725	+		DDA3937_RS09420	0.17	+4.0
2,123,741	+		DDA3937_RS09420	0.19	+0.2
2,123,742	-		DDA3937_RS09420	0.19	-0.3
2,123,742	-		DDA3937_RS09420	0.19	-0.3
2,123,742	-		DDA3937_RS09420	0.19	-0.4
2,123,742	-		DDA3937_RS09420	0.19	-0.3
2,123,788	+		DDA3937_RS09420	0.22	-0.4
2,123,788	+		DDA3937_RS09420	0.22	+0.3
2,123,793	+		DDA3937_RS09420	0.23	-1.1
2,123,794	-		DDA3937_RS09420	0.23	+1.6
2,123,894	-		DDA3937_RS09420	0.31	-0.3
2,123,896	+		DDA3937_RS09420	0.31	+0.4
2,123,896	+		DDA3937_RS09420	0.31	+0.9
2,123,897	-		DDA3937_RS09420	0.32	-0.9
2,123,897	-		DDA3937_RS09420	0.32	-1.4
2,123,948	+		DDA3937_RS09420	0.36	-2.4
2,123,949	-		DDA3937_RS09420	0.36	-0.6
2,123,949	-		DDA3937_RS09420	0.36	-1.1
2,123,949	-		DDA3937_RS09420	0.36	-0.4
2,124,049	+		DDA3937_RS09420	0.44	-0.8
2,124,063	-		DDA3937_RS09420	0.45	+0.1
2,124,125	+		DDA3937_RS09420	0.50	+0.2
2,124,160	+		DDA3937_RS09420	0.53	-0.8
2,124,160	+				-0.2
2,124,161	-		DDA3937_RS09420	0.53	+0.4
2,124,181	+		DDA3937_RS09420	0.55	-0.6
2,124,213	+		DDA3937_RS09420	0.58	-0.2
2,124,214	-		DDA3937_RS09420	0.58	-0.6
2,124,214	-		DDA3937_RS09420	0.58	-0.1
2,124,214	-		DDA3937_RS09420	0.58	-1.2
2,124,235	+		DDA3937_RS09420	0.59	+0.5
2,124,328	-		DDA3937_RS09420	0.67	-1.0
2,124,642	+				-0.0
2,124,642	+				-0.2
2,124,827	+				+0.8
2,124,827	+				+0.8
2,124,828	-				-0.6
2,124,828	-				-0.2
2,124,832	+				-0.9
2,124,832	+				-0.7
2,124,832	+				+0.2
2,124,832	+				+0.4
2,124,833	-				+0.2
2,124,833	-				-0.0
2,124,833	-				+0.0
2,124,833	-				-0.0
2,124,833	-				+0.9
2,124,833	-				+1.1
2,124,833	-				-0.6
2,124,833	-				-0.4
2,124,877	+		DDA3937_RS09425	0.11	-0.1
2,124,878	-		DDA3937_RS09425	0.11	+0.4
2,124,878	-		DDA3937_RS09425	0.11	-0.2
2,124,878	-				+0.4
2,124,878	-		DDA3937_RS09425	0.11	+0.1
2,124,996	+		DDA3937_RS09425	0.27	-0.5
2,124,996	+		DDA3937_RS09425	0.27	-1.2
2,124,996	+		DDA3937_RS09425	0.27	+1.2
2,125,005	+		DDA3937_RS09425	0.28	+0.0
2,125,176	+		DDA3937_RS09425	0.50	-0.7
2,125,176	+		DDA3937_RS09425	0.50	-0.3
2,125,187	+		DDA3937_RS09425	0.51	+0.7
2,125,187	+		DDA3937_RS09425	0.51	-1.0
2,125,188	-		DDA3937_RS09425	0.52	-1.2
2,125,356	-		DDA3937_RS09425	0.73	+0.1
2,125,356	-		DDA3937_RS09425	0.73	-0.0
2,125,356	-		DDA3937_RS09425	0.73	+0.3
2,125,356	-		DDA3937_RS09425	0.73	-0.8
2,125,394	+		DDA3937_RS09425	0.78	+0.1
2,125,409	-		DDA3937_RS09425	0.80	+0.6
2,125,589	-				-0.1
2,125,604	+				+0.2
2,125,605	-				+0.4
2,125,653	+				+0.6
2,125,653	+				+0.8
2,125,654	-				+0.4
2,125,660	+				-1.2
2,125,660	+				+0.8
2,125,661	-				-0.3