Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08465

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,911,998	-		DDA3937_RS08460	0.26	+1.3
1,912,054	+		DDA3937_RS08460	0.31	-0.3
1,912,055	-		DDA3937_RS08460	0.31	-1.3
1,912,076	+		DDA3937_RS08460	0.33	+0.1
1,912,077	-		DDA3937_RS08460	0.33	-1.6
1,912,078	+		DDA3937_RS08460	0.33	-1.9
1,912,084	+		DDA3937_RS08460	0.34	+0.6
1,912,094	+		DDA3937_RS08460	0.35	-1.5
1,912,186	+		DDA3937_RS08460	0.43	-0.3
1,912,186	+		DDA3937_RS08460	0.43	-0.6
1,912,186	+		DDA3937_RS08460	0.43	+0.1
1,912,186	+		DDA3937_RS08460	0.43	+0.0
1,912,275	-		DDA3937_RS08460	0.52	-1.5
1,912,346	+		DDA3937_RS08460	0.59	+0.1
1,912,361	+		DDA3937_RS08460	0.60	+0.6
1,912,361	+		DDA3937_RS08460	0.60	-1.5
1,912,361	+		DDA3937_RS08460	0.60	-0.7
1,912,372	+		DDA3937_RS08460	0.61	-0.5
1,912,373	-		DDA3937_RS08460	0.61	-1.4
1,912,389	-		DDA3937_RS08460	0.63	+1.1
1,912,396	-		DDA3937_RS08460	0.63	-0.0
1,912,447	+		DDA3937_RS08460	0.68	-0.5
1,912,447	+		DDA3937_RS08460	0.68	+0.6
1,912,492	-		DDA3937_RS08460	0.72	+1.1
1,912,501	+		DDA3937_RS08460	0.73	+0.5
1,912,502	-		DDA3937_RS08460	0.73	+0.1
1,912,502	-		DDA3937_RS08460	0.73	-0.3
1,912,504	-		DDA3937_RS08460	0.74	-0.5
1,912,504	-		DDA3937_RS08460	0.74	+0.6
1,912,631	+		DDA3937_RS08460	0.86	-0.8
1,912,632	-		DDA3937_RS08460	0.86	+1.1
1,912,656	-		DDA3937_RS08460	0.88	-1.1
1,912,656	-		DDA3937_RS08460	0.88	-0.9
1,912,761	+				-0.9
1,912,761	+				-0.1
1,912,762	-				+0.1
1,912,848	+				-0.3
1,912,879	-				+0.2
1,912,879	-				+0.5
1,912,983	+		DDA3937_RS08465	0.21	-0.5
1,912,983	+		DDA3937_RS08465	0.21	-0.4
1,912,983	+		DDA3937_RS08465	0.21	-1.7
1,912,984	-		DDA3937_RS08465	0.22	-0.3
1,912,999	-		DDA3937_RS08465	0.26	+0.8
1,912,999	-		DDA3937_RS08465	0.26	-1.0
1,913,060	+		DDA3937_RS08465	0.41	+0.7
1,913,060	+		DDA3937_RS08465	0.41	-0.4
1,913,060	+		DDA3937_RS08465	0.41	+1.7
1,913,060	+		DDA3937_RS08465	0.41	-0.0
1,913,060	+		DDA3937_RS08465	0.41	+0.2
1,913,061	-		DDA3937_RS08465	0.41	+0.3
1,913,061	-		DDA3937_RS08465	0.41	+0.3
1,913,264	-				-0.7
1,913,276	-				+0.5
1,913,276	-				+0.1
1,913,296	+				+0.8
1,913,297	-				-0.3
1,913,333	+				-1.6
1,913,333	+				+1.0
1,913,333	+				+0.0
1,913,333	+				+0.2
1,913,333	+				-2.5
1,913,333	+				-1.2
1,913,334	-				-1.1
1,913,334	-				+0.5
1,913,334	-				-0.6
1,913,334	-				-0.5
1,913,471	+		DDA3937_RS08470	0.15	-0.1
1,913,471	+		DDA3937_RS08470	0.15	-0.5
1,913,471	+		DDA3937_RS08470	0.15	-0.4
1,913,472	-		DDA3937_RS08470	0.15	+0.8
1,913,472	-		DDA3937_RS08470	0.15	-0.4
1,913,482	+		DDA3937_RS08470	0.16	-0.5
1,913,483	-		DDA3937_RS08470	0.16	-0.9
1,913,506	+		DDA3937_RS08470	0.19	-0.1
1,913,618	+		DDA3937_RS08470	0.34	+0.2
1,913,619	-		DDA3937_RS08470	0.34	+0.1
1,913,622	+		DDA3937_RS08470	0.35	+1.1
1,913,623	-		DDA3937_RS08470	0.35	-0.5
1,913,623	-		DDA3937_RS08470	0.35	-0.1
1,913,623	-		DDA3937_RS08470	0.35	+0.1
1,913,685	+		DDA3937_RS08470	0.43	-1.9
1,913,686	-		DDA3937_RS08470	0.43	-1.0
1,913,871	+		DDA3937_RS08470	0.67	-0.8
1,913,872	-		DDA3937_RS08470	0.68	+0.2
1,913,970	-		DDA3937_RS08470	0.81	-0.5
1,913,989	+		DDA3937_RS08470	0.83	-0.1
1,914,081	-				+0.5
1,914,081	-				-0.3
1,914,122	-				-0.0
1,914,144	-				-0.1
1,914,215	+				-0.1
1,914,215	+				+1.5