Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS08455

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,909,908	+		DDA3937_RS08445	0.74	-0.5
1,909,908	+		DDA3937_RS08445	0.74	-2.1
1,909,908	+		DDA3937_RS08445	0.74	-1.3
1,909,908	+		DDA3937_RS08445	0.74	-0.0
1,909,908	+		DDA3937_RS08445	0.74	+0.7
1,909,909	-		DDA3937_RS08445	0.74	-1.1
1,909,909	-		DDA3937_RS08445	0.74	-0.9
1,909,909	-		DDA3937_RS08445	0.74	-0.4
1,909,954	+		DDA3937_RS08445	0.76	-2.9
1,909,954	+		DDA3937_RS08445	0.76	-0.4
1,909,954	+		DDA3937_RS08445	0.76	+0.8
1,909,954	+		DDA3937_RS08445	0.76	-0.1
1,909,960	-		DDA3937_RS08445	0.76	-0.7
1,909,960	-		DDA3937_RS08445	0.76	-0.8
1,909,969	+		DDA3937_RS08445	0.77	+0.9
1,909,969	+		DDA3937_RS08445	0.77	-0.5
1,909,990	-		DDA3937_RS08445	0.78	-0.7
1,909,990	-		DDA3937_RS08445	0.78	-0.5
1,910,016	+		DDA3937_RS08445	0.79	-1.1
1,910,016	+		DDA3937_RS08445	0.79	-0.5
1,910,016	+		DDA3937_RS08445	0.79	-0.8
1,910,016	+		DDA3937_RS08445	0.79	-0.3
1,910,016	+		DDA3937_RS08445	0.79	-0.8
1,910,016	+		DDA3937_RS08445	0.79	-0.3
1,910,016	+		DDA3937_RS08445	0.79	+0.2
1,910,034	+		DDA3937_RS08445	0.80	+0.8
1,910,034	+		DDA3937_RS08445	0.80	-1.3
1,910,035	-		DDA3937_RS08445	0.80	-0.2
1,910,078	+		DDA3937_RS08445	0.82	+0.1
1,910,117	+		DDA3937_RS08445	0.84	+0.2
1,910,117	+		DDA3937_RS08445	0.84	-0.0
1,910,142	+		DDA3937_RS08445	0.85	-0.2
1,910,143	-		DDA3937_RS08445	0.85	+0.7
1,910,153	+		DDA3937_RS08445	0.85	+0.3
1,910,153	+		DDA3937_RS08445	0.85	-1.9
1,910,178	+		DDA3937_RS08445	0.86	-0.3
1,910,178	+		DDA3937_RS08445	0.86	+1.5
1,910,178	+		DDA3937_RS08445	0.86	-0.5
1,910,179	-		DDA3937_RS08445	0.86	+0.5
1,910,196	+		DDA3937_RS08445	0.87	-0.8
1,910,196	+		DDA3937_RS08445	0.87	-0.0
1,910,253	+		DDA3937_RS08445	0.90	+1.1
1,910,253	+		DDA3937_RS08445	0.90	+0.5
1,910,253	+		DDA3937_RS08445	0.90	-1.9
1,910,254	-		DDA3937_RS08445	0.90	-0.2
1,910,256	+		DDA3937_RS08445	0.90	-0.1
1,910,256	+		DDA3937_RS08445	0.90	-0.4
1,910,256	+		DDA3937_RS08445	0.90	+0.6
1,910,257	-		DDA3937_RS08445	0.90	+2.3
1,910,274	+				-0.5
1,910,303	+				-0.3
1,910,304	-				-1.1
1,910,304	-				-0.5
1,910,318	+				+0.2
1,910,349	+				-1.0
1,910,349	+				-0.5
1,910,350	-				-0.9
1,910,410	+				+0.1
1,910,431	-				-0.8
1,910,452	+				+0.5
1,910,452	+				+0.6
1,910,452	+				-0.0
1,910,452	+				+0.2
1,910,453	-				-1.3
1,910,453	-				-0.2
1,910,453	-				-0.8
1,910,453	-				+0.3
1,910,453	-				+0.3
1,910,453	-				-1.1
1,910,541	+				-0.2
1,910,541	+				-0.2
1,910,541	+				-0.7
1,910,541	+				+0.2
1,910,542	-				-0.9
1,910,542	-				+0.7
1,910,542	-				+0.7
1,910,551	+				-0.1
1,910,604	-				-1.5
1,910,614	-				+1.1
1,910,627	-				-0.0
1,910,646	-				-0.4
1,910,812	+				+0.9
1,910,816	-				-0.5
1,910,881	+				+1.2
1,910,881	+				-0.3
1,910,881	+				+0.5
1,910,881	+				+1.2
1,910,892	+				+0.5
1,910,893	-				+0.7
1,910,912	-				-0.6
1,910,934	+				-0.9
1,911,182	+		DDA3937_RS08455	0.52	-0.3
1,911,182	+		DDA3937_RS08455	0.52	-0.9
1,911,182	+		DDA3937_RS08455	0.52	-0.2
1,911,182	+		DDA3937_RS08455	0.52	-0.5
1,911,183	-		DDA3937_RS08455	0.53	-1.0
1,911,183	-		DDA3937_RS08455	0.53	+1.0
1,911,183	-		DDA3937_RS08455	0.53	-1.4
1,911,267	+		DDA3937_RS08455	0.68	-0.3
1,911,267	+		DDA3937_RS08455	0.68	-0.2
1,911,268	-		DDA3937_RS08455	0.68	+0.5
1,911,268	-		DDA3937_RS08455	0.68	-0.1
1,911,268	-		DDA3937_RS08455	0.68	+0.1
1,911,268	-		DDA3937_RS08455	0.68	+1.1
1,911,329	-				-0.5
1,911,331	+		DDA3937_RS08455	0.79	+0.1
1,911,331	+		DDA3937_RS08455	0.79	+0.5
1,911,340	+		DDA3937_RS08455	0.81	-0.6
1,911,395	-				-0.0
1,911,421	-				-0.4
1,911,421	-				+0.7
1,911,421	-				+0.1
1,911,424	-				-0.9
1,911,445	+				+0.5
1,911,446	-				+0.2
1,911,508	-				-0.5
1,911,518	-				-0.0
1,911,518	-				+0.1
1,911,518	-				+1.1
1,911,518	-				+0.5
1,911,551	-				-1.9
1,911,565	-				+1.3
1,911,597	-				-0.3
1,911,609	-				+0.3
1,911,609	-				+0.5
1,911,612	-				-0.2
1,911,616	+				-2.3
1,911,617	-				+0.6
1,911,750	-				+0.0
1,911,845	-		DDA3937_RS08460	0.11	-1.3
1,911,998	-		DDA3937_RS08460	0.26	+1.3
1,912,054	+		DDA3937_RS08460	0.31	-0.3
1,912,055	-		DDA3937_RS08460	0.31	-1.3
1,912,076	+		DDA3937_RS08460	0.33	+0.1
1,912,077	-		DDA3937_RS08460	0.33	-1.6
1,912,078	+		DDA3937_RS08460	0.33	-1.9
1,912,084	+		DDA3937_RS08460	0.34	+0.6
1,912,094	+		DDA3937_RS08460	0.35	-1.5
1,912,186	+		DDA3937_RS08460	0.43	-0.3
1,912,186	+		DDA3937_RS08460	0.43	-0.6
1,912,186	+		DDA3937_RS08460	0.43	+0.1
1,912,186	+		DDA3937_RS08460	0.43	+0.0
1,912,275	-		DDA3937_RS08460	0.52	-1.5
1,912,346	+		DDA3937_RS08460	0.59	+0.1
1,912,361	+		DDA3937_RS08460	0.60	+0.6
1,912,361	+		DDA3937_RS08460	0.60	-1.5
1,912,361	+		DDA3937_RS08460	0.60	-0.7
1,912,372	+		DDA3937_RS08460	0.61	-0.5
1,912,373	-		DDA3937_RS08460	0.61	-1.4
1,912,389	-		DDA3937_RS08460	0.63	+1.1
1,912,396	-		DDA3937_RS08460	0.63	-0.0