Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS23320

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,754,036	-				+0.7
3,754,073	+				-0.1
3,754,131	+		DDA3937_RS16465	0.16	+0.4
3,754,132	-		DDA3937_RS16465	0.16	+0.4
3,754,132	-		DDA3937_RS16465	0.16	-0.3
3,754,148	+		DDA3937_RS16465	0.18	+1.2
3,754,148	+		DDA3937_RS16465	0.18	-1.1
3,754,148	+		DDA3937_RS16465	0.18	+0.2
3,754,149	-		DDA3937_RS16465	0.19	-0.5
3,754,293	-		DDA3937_RS16465	0.42	-0.6
3,754,293	-		DDA3937_RS16465	0.42	-0.3
3,754,293	-		DDA3937_RS16465	0.42	+0.4
3,754,293	-		DDA3937_RS16465	0.42	-0.9
3,754,358	-		DDA3937_RS16465	0.52	-1.0
3,754,363	+		DDA3937_RS16465	0.53	-0.1
3,754,363	+		DDA3937_RS16465	0.53	-1.0
3,754,364	-		DDA3937_RS16465	0.53	-0.0
3,754,364	-		DDA3937_RS16465	0.53	+0.8
3,754,374	+		DDA3937_RS16465	0.55	-0.0
3,754,374	+		DDA3937_RS16465	0.55	+0.4
3,754,375	-		DDA3937_RS16465	0.55	-0.4
3,754,413	+		DDA3937_RS16465	0.61	-0.0
3,754,413	+		DDA3937_RS16465	0.61	+0.4
3,754,413	+		DDA3937_RS16465	0.61	+2.0
3,754,413	+		DDA3937_RS16465	0.61	+0.6
3,754,413	+		DDA3937_RS16465	0.61	-0.4
3,754,414	-		DDA3937_RS16465	0.61	-1.3
3,754,414	-		DDA3937_RS16465	0.61	+1.0
3,754,414	-		DDA3937_RS16465	0.61	+0.5
3,754,414	-		DDA3937_RS16465	0.61	+0.7
3,754,432	-		DDA3937_RS16465	0.64	-1.3
3,754,445	-		DDA3937_RS16465	0.67	+0.3
3,754,454	-		DDA3937_RS16465	0.68	+1.0
3,754,511	+		DDA3937_RS16465	0.77	-1.8
3,754,512	-		DDA3937_RS16465	0.77	-0.5
3,754,516	-		DDA3937_RS16465	0.78	+0.9
3,754,542	+		DDA3937_RS16465	0.82	+0.6
3,754,576	+		DDA3937_RS16465	0.88	+0.4
3,754,576	+		DDA3937_RS16465	0.88	-0.0
3,754,576	+		DDA3937_RS16465	0.88	+0.9
3,754,607	-				-1.3
3,754,607	-				+0.1
3,754,609	+				-1.7
3,754,609	+				-1.2
3,754,609	+				-0.1
3,754,609	+				-0.0
3,754,609	+				+1.0
3,754,610	-				-0.5
3,754,610	-				-0.8
3,754,610	-				-1.3
3,754,610	-				+0.7
3,754,610	-				+0.7
3,754,610	-				-2.2
3,754,629	+				-0.0
3,754,629	+				+0.2
3,754,629	+				-0.4
3,754,630	-				+1.0
3,754,630	-				+0.1
3,754,706	+				+0.3
3,754,709	+				-0.2
3,754,710	-				-0.2
3,754,762	+				+0.1
3,754,773	-				-0.2
3,754,794	+				-1.0
3,754,841	+				-0.4
3,754,841	+				-0.4
3,754,841	+				-0.0
3,754,841	+				+0.3
3,754,854	+				-0.0
3,754,857	-				+0.2
3,754,857	-				+0.1
3,754,896	+				-0.1
3,754,904	-				+0.3
3,755,044	+				-0.0
3,755,045	-				+0.1
3,755,049	-				-0.2
3,755,058	-		DDA3937_RS23320	0.13	+0.1
3,755,072	+				-0.6
3,755,073	-		DDA3937_RS23320	0.19	-0.8
3,755,073	-		DDA3937_RS23320	0.19	-0.6
3,755,075	-		DDA3937_RS23320	0.20	-1.3
3,755,082	-		DDA3937_RS23320	0.22	+0.3
3,755,123	-		DDA3937_RS23320	0.38	-0.0
3,755,123	-		DDA3937_RS23320	0.38	-0.3
3,755,196	-		DDA3937_RS23320	0.66	+1.7
3,755,209	+		DDA3937_RS23320	0.71	-1.0
3,755,214	+		DDA3937_RS23320	0.73	-1.8
3,755,261	+				+1.2
3,755,365	-				+0.8
3,755,369	+				-0.7
3,755,369	+				-0.0
3,755,370	-				+0.6
3,755,443	-				-0.3
3,755,476	+				+0.3
3,755,482	+				-0.4
3,755,483	-				-0.6
3,755,544	+				+0.4
3,755,570	-				-0.3
3,755,623	+		DDA3937_RS16470	0.18	+1.7
3,755,754	+		DDA3937_RS16470	0.42	-1.0
3,755,776	+		DDA3937_RS16470	0.46	-0.6
3,755,785	+		DDA3937_RS16470	0.47	-0.5
3,755,965	-		DDA3937_RS16470	0.80	-1.3
3,756,074	+				+0.8
3,756,087	-				+1.0
3,756,249	+		DDA3937_RS16475	0.19	-0.8
3,756,250	-		DDA3937_RS16475	0.19	-0.4
3,756,266	-		DDA3937_RS16475	0.21	-2.2