Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15870

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,629,052	+		DDA3937_RS15865	0.71	+3.1
3,629,086	-		DDA3937_RS15865	0.74	+1.8
3,629,086	-		DDA3937_RS15865	0.74	-0.6
3,629,247	+		DDA3937_RS15865	0.84	-0.5
3,629,248	-		DDA3937_RS15865	0.84	-0.3
3,629,250	-		DDA3937_RS15865	0.85	-1.4
3,629,250	-		DDA3937_RS15865	0.85	+1.6
3,629,250	-				-0.0
3,629,408	+				+1.0
3,629,484	+				-0.8
3,629,484	+				-0.4
3,629,484	+				-0.0
3,629,484	+				-0.0
3,629,484	+				-0.0
3,629,485	-				-2.0
3,629,485	-				+0.6
3,629,498	+				-2.8
3,629,498	+				-0.2
3,629,498	+				-0.9
3,629,498	+				+0.4
3,629,498	+				+0.7
3,629,499	-				-0.1
3,629,499	-				-0.2
3,629,499	-				+0.7
3,629,499	-				+0.6
3,629,499	-				+0.2
3,629,581	+				-1.4
3,629,581	+				+0.1
3,629,582	-				+1.3
3,629,582	-				-0.0
3,629,620	-				-0.4
3,629,630	-				+0.5
3,629,665	+				-1.4
3,629,677	+				+0.6
3,629,799	+				+0.2
3,629,961	+				-2.9
3,629,962	-				-0.2
3,629,962	-				-0.4
3,629,962	-				-0.1
3,629,963	+				-1.0
3,629,963	+				+0.3
3,629,964	-				+0.0
3,629,964	-				-0.3
3,629,967	+				-0.8
3,629,967	+				-0.0
3,629,967	+				-0.0
3,629,967	+				+2.0
3,629,967	+				+0.2
3,629,967	+				-0.8
3,629,967	+				+1.3
3,629,967	+				+0.2
3,629,967	+				-0.0
3,629,968	-				-1.0
3,629,968	-				+0.7
3,629,968	-				-0.0
3,629,968	-				-0.6
3,629,968	-				-1.8
3,629,999	+				+1.9
3,630,008	+				+0.3
3,630,735	+				-0.2
3,630,810	-				+0.6
3,630,817	+				-0.4
3,630,964	+		DDA3937_RS15875	0.20	+0.9
3,630,964	+		DDA3937_RS15875	0.20	-1.5
3,630,965	-		DDA3937_RS15875	0.21	+1.2
3,630,965	-		DDA3937_RS15875	0.21	+0.3
3,630,965	-		DDA3937_RS15875	0.21	-0.2
3,630,965	-		DDA3937_RS15875	0.21	+1.7
3,630,965	-		DDA3937_RS15875	0.21	-0.1
3,630,969	-		DDA3937_RS15875	0.21	+0.6
3,631,030	+		DDA3937_RS15875	0.28	+0.2
3,631,030	+		DDA3937_RS15875	0.28	-1.5
3,631,030	+		DDA3937_RS15875	0.28	+0.2
3,631,031	-		DDA3937_RS15875	0.29	+0.6
3,631,031	-		DDA3937_RS15875	0.29	-1.4
3,631,031	-		DDA3937_RS15875	0.29	+0.4
3,631,031	-		DDA3937_RS15875	0.29	+0.5
3,631,128	-		DDA3937_RS15875	0.40	-0.5
3,631,184	+		DDA3937_RS15875	0.47	+0.8
3,631,184	+		DDA3937_RS15875	0.47	-0.3
3,631,315	+		DDA3937_RS15875	0.63	-0.1
3,631,335	+		DDA3937_RS15875	0.66	+0.1
3,631,335	+		DDA3937_RS15875	0.66	+0.1
3,631,335	+		DDA3937_RS15875	0.66	-0.1
3,631,336	-		DDA3937_RS15875	0.66	+1.0
3,631,336	-		DDA3937_RS15875	0.66	-0.1
3,631,336	-		DDA3937_RS15875	0.66	-0.2
3,631,348	-		DDA3937_RS15875	0.67	+1.2
3,631,635	-				+0.7