Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14605

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,342,313	-		DDA3937_RS14600	0.62	-0.3
3,342,325	+		DDA3937_RS14600	0.63	+1.5
3,342,325	+		DDA3937_RS14600	0.63	+0.4
3,342,362	-		DDA3937_RS14600	0.64	+1.5
3,342,437	+		DDA3937_RS14600	0.68	+0.5
3,342,438	-		DDA3937_RS14600	0.68	-0.2
3,342,438	-		DDA3937_RS14600	0.68	-0.8
3,342,441	+		DDA3937_RS14600	0.68	+0.5
3,342,441	+		DDA3937_RS14600	0.68	+0.6
3,342,441	+		DDA3937_RS14600	0.68	+0.3
3,342,442	-		DDA3937_RS14600	0.68	-1.0
3,342,442	-		DDA3937_RS14600	0.68	-0.0
3,342,442	-		DDA3937_RS14600	0.68	-0.2
3,342,442	-		DDA3937_RS14600	0.68	+0.4
3,342,442	-		DDA3937_RS14600	0.68	-0.3
3,342,442	-		DDA3937_RS14600	0.68	-0.3
3,342,442	-		DDA3937_RS14600	0.68	+0.0
3,342,456	-		DDA3937_RS14600	0.69	+0.3
3,342,505	+		DDA3937_RS14600	0.71	-0.3
3,342,724	+		DDA3937_RS14600	0.81	-0.3
3,342,725	-		DDA3937_RS14600	0.81	-0.2
3,343,076	+				+0.4
3,343,076	+				+0.4
3,343,124	+				-0.3
3,343,124	+				+1.0
3,343,125	-				+0.5
3,343,494	-		DDA3937_RS14605	0.26	+0.3
3,343,544	+		DDA3937_RS14605	0.30	-0.1
3,343,545	-		DDA3937_RS14605	0.30	+0.1
3,343,548	+		DDA3937_RS14605	0.30	+0.3
3,343,548	+		DDA3937_RS14605	0.30	-0.5
3,343,548	+		DDA3937_RS14605	0.30	+0.4
3,343,548	+		DDA3937_RS14605	0.30	+0.6
3,343,548	+		DDA3937_RS14605	0.30	-0.2
3,343,548	+		DDA3937_RS14605	0.30	+0.0
3,343,549	-		DDA3937_RS14605	0.31	+0.6
3,343,549	-		DDA3937_RS14605	0.31	-0.2
3,343,549	-		DDA3937_RS14605	0.31	-1.5
3,343,549	-		DDA3937_RS14605	0.31	-1.2
3,343,549	-		DDA3937_RS14605	0.31	+0.1
3,343,549	-		DDA3937_RS14605	0.31	-0.6
3,343,549	-		DDA3937_RS14605	0.31	+0.0
3,343,549	-		DDA3937_RS14605	0.31	+0.5
3,343,686	+		DDA3937_RS14605	0.41	+0.1
3,343,698	-		DDA3937_RS14605	0.42	+0.4
3,343,725	+		DDA3937_RS14605	0.44	+0.2
3,343,725	+		DDA3937_RS14605	0.44	+0.4
3,343,725	+		DDA3937_RS14605	0.44	+1.3
3,343,726	-		DDA3937_RS14605	0.44	+0.1
3,343,753	-		DDA3937_RS14605	0.46	+1.6
3,343,754	+				-0.2
3,343,755	-		DDA3937_RS14605	0.46	+0.3
3,343,792	+		DDA3937_RS14605	0.49	+0.0
3,343,871	+		DDA3937_RS14605	0.55	-0.3
3,343,872	-		DDA3937_RS14605	0.55	+0.6
3,343,922	+		DDA3937_RS14605	0.59	-0.2
3,343,923	-		DDA3937_RS14605	0.59	+0.6
3,343,951	+		DDA3937_RS14605	0.61	-1.5
3,344,175	+		DDA3937_RS14605	0.77	+0.4
3,344,175	+		DDA3937_RS14605	0.77	+0.8
3,344,175	+		DDA3937_RS14605	0.77	-1.5
3,344,175	+		DDA3937_RS14605	0.77	+0.3
3,344,175	+		DDA3937_RS14605	0.77	+0.6
3,344,175	+		DDA3937_RS14605	0.77	-1.0
3,344,175	+		DDA3937_RS14605	0.77	-0.6
3,344,175	+		DDA3937_RS14605	0.77	-0.2
3,344,175	+		DDA3937_RS14605	0.77	+0.7
3,344,175	+		DDA3937_RS14605	0.77	-0.8
3,344,175	+		DDA3937_RS14605	0.77	-0.6
3,344,175	+		DDA3937_RS14605	0.77	+1.0
3,344,175	+		DDA3937_RS14605	0.77	+0.8
3,344,175	+		DDA3937_RS14605	0.77	+1.4
3,344,176	-		DDA3937_RS14605	0.78	-0.1
3,344,176	-		DDA3937_RS14605	0.78	-0.6
3,344,176	-		DDA3937_RS14605	0.78	-0.5
3,344,176	-		DDA3937_RS14605	0.78	+0.3
3,344,176	-		DDA3937_RS14605	0.78	+0.8
3,344,176	-		DDA3937_RS14605	0.78	-0.2
3,344,176	-		DDA3937_RS14605	0.78	+0.0
3,344,176	-		DDA3937_RS14605	0.78	+1.1
3,344,177	+		DDA3937_RS14605	0.78	+0.0
3,344,178	-		DDA3937_RS14605	0.78	+0.5
3,344,178	-		DDA3937_RS14605	0.78	-1.8
3,344,178	-		DDA3937_RS14605	0.78	+0.5
3,344,178	-		DDA3937_RS14605	0.78	+0.1
3,344,352	+				+0.7
3,344,353	-				+1.8
3,344,360	+				+0.8
3,344,360	+				+0.4
3,344,360	+				+0.2
3,344,360	+				-0.7
3,344,360	+				-0.2
3,344,360	+				+0.6
3,344,361	-				-0.6
3,344,361	-				-0.5
3,344,361	-				+0.3
3,344,361	-				-1.5
3,344,533	-				+0.2
3,344,533	-				-0.2
3,344,533	-				+0.3
3,344,537	+				-0.4
3,344,538	-				+0.8
3,344,604	+				-0.3
3,344,635	+				-0.9
3,344,677	+				+0.1
3,344,677	+				+0.3
3,344,678	-				-0.6
3,344,709	+				+1.2
3,344,720	+				-1.3
3,344,720	+				-0.5
3,344,721	-				+0.1
3,344,721	-				-0.9
3,344,721	-				+1.0
3,344,727	-				-0.9
3,344,727	-				-0.9
3,344,727	-				+0.8
3,344,727	-				+0.2
3,344,729	+				-0.3
3,344,730	-				-0.9
3,344,730	-				+0.1
3,344,730	-				+0.3
3,344,736	-				+1.6
3,344,736	-				-0.4
3,344,736	-				-0.0
3,344,738	+				-0.7
3,344,738	+				+1.3
3,344,738	+				-0.5
3,344,739	-				+1.2
3,344,739	-				+0.4
3,344,739	-				+0.2
3,344,744	+				-0.4
3,344,744	+				-2.0
3,344,744	+				-0.5
3,344,744	+				+0.6
3,344,744	+				-0.2
3,344,744	+				-0.6
3,344,745	-				-0.3
3,344,745	-				-0.3
3,344,747	+				-0.4
3,344,747	+				-0.7
3,344,747	+				+0.6
3,344,748	-				+0.2
3,344,748	-				-1.5
3,344,754	-				-0.6
3,344,754	-				-1.5
3,344,754	-				+0.4
3,344,756	+				-0.4
3,344,756	+				+0.4
3,344,756	+				+0.8
3,344,756	+				+0.1
3,344,757	-				-0.2
3,344,757	-				-0.2
3,344,757	-				+0.4
3,344,762	+				-0.4
3,344,763	-				-0.5
3,344,765	+				-0.3
3,344,766	-				-1.0
3,344,768	+				-1.4
3,344,768	+				+0.1
3,344,768	+				-0.9
3,344,768	+				+0.4
3,344,768	+				-0.9
3,344,768	+				-0.7
3,344,768	+				-1.5
3,344,768	+				+0.0
3,344,768	+				-0.5
3,344,768	+				-0.4
3,344,768	+				-0.2
3,344,769	-				+0.5
3,344,769	-				+0.3
3,344,769	-				+0.4
3,344,769	-				-0.4
3,344,769	-				-1.5
3,344,769	-				+0.6
3,344,962	+		DDA3937_RS14610	0.61	-0.3
3,344,977	-		DDA3937_RS14610	0.66	-0.4
3,344,977	-		DDA3937_RS14610	0.66	+0.6
3,344,977	-		DDA3937_RS14610	0.66	-1.2
3,345,052	+				-1.7
3,345,125	+				-0.2
3,345,150	-				+0.4
3,345,167	-				+1.4
3,345,167	-				+0.8
3,345,172	+				-0.0
3,345,173	-				-1.2
3,345,173	-				-0.4
3,345,173	-				+0.6
3,345,173	-				-0.6
3,345,180	-				+0.8
3,345,180	-				-0.6
3,345,180	-				-0.6
3,345,180	-				-0.9
3,345,198	-				+0.3
3,345,253	+				+0.1
3,345,312	+				-0.2
3,345,312	+				-0.6
3,345,313	-				-0.4
3,345,343	+				-0.2
3,345,350	-				-0.2
3,345,350	-				+0.3
3,345,352	-				+0.3
3,345,395	+				+0.4
3,345,396	-				-0.4
3,345,396	-				-0.7
3,345,414	+				+0.5
3,345,414	+				+0.6