Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14590

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,338,096	-		DDA3937_RS14585	0.41	+0.2
3,338,096	-		DDA3937_RS14585	0.41	-1.8
3,338,098	-		DDA3937_RS14585	0.41	+0.2
3,338,098	-		DDA3937_RS14585	0.41	-0.5
3,338,098	-		DDA3937_RS14585	0.41	+0.0
3,338,156	-				-1.2
3,338,370	+		DDA3937_RS14585	0.71	-0.2
3,338,545	-		DDA3937_RS14585	0.89	-0.2
3,338,548	-		DDA3937_RS14585	0.90	-0.8
3,338,548	-		DDA3937_RS14585	0.90	+0.6
3,338,603	-				-1.5
3,338,603	-				-0.5
3,338,663	-				-0.2
3,338,750	+				-0.3
3,338,751	-				-0.5
3,338,751	-				-0.2
3,338,751	-				+0.4
3,338,827	-				-0.0
3,338,827	-				-1.0
3,338,827	-				+0.0
3,338,827	-				-0.2
3,338,827	-				+0.1
3,338,851	+				-0.2
3,338,852	-				-0.0
3,338,907	-				-1.5
3,339,014	-		DDA3937_RS14590	0.14	+0.0
3,339,027	+				-1.0
3,339,027	+		DDA3937_RS14590	0.16	+0.2
3,339,027	+		DDA3937_RS14590	0.16	-0.5
3,339,027	+		DDA3937_RS14590	0.16	+0.4
3,339,027	+		DDA3937_RS14590	0.16	+0.4
3,339,027	+		DDA3937_RS14590	0.16	+0.2
3,339,027	+		DDA3937_RS14590	0.16	-0.5
3,339,027	+		DDA3937_RS14590	0.16	-0.4
3,339,027	+		DDA3937_RS14590	0.16	-1.3
3,339,027	+		DDA3937_RS14590	0.16	+0.4
3,339,027	+		DDA3937_RS14590	0.16	-2.0
3,339,027	+		DDA3937_RS14590	0.16	-0.6
3,339,027	+		DDA3937_RS14590	0.16	+0.6
3,339,027	+		DDA3937_RS14590	0.16	-0.8
3,339,028	-				-2.3
3,339,028	-		DDA3937_RS14590	0.16	+0.4
3,339,028	-		DDA3937_RS14590	0.16	-0.7
3,339,028	-		DDA3937_RS14590	0.16	+0.8
3,339,028	-		DDA3937_RS14590	0.16	-0.2
3,339,028	-		DDA3937_RS14590	0.16	+1.1
3,339,028	-		DDA3937_RS14590	0.16	-0.1
3,339,159	+		DDA3937_RS14590	0.40	-1.0
3,339,160	-		DDA3937_RS14590	0.41	+1.6
3,339,160	-		DDA3937_RS14590	0.41	+1.0
3,339,160	-		DDA3937_RS14590	0.41	+0.1
3,339,160	-		DDA3937_RS14590	0.41	-0.3
3,339,160	-		DDA3937_RS14590	0.41	+0.1
3,339,213	+		DDA3937_RS14590	0.50	-1.3
3,339,312	+		DDA3937_RS14590	0.69	-0.2
3,339,312	+		DDA3937_RS14590	0.69	+0.1
3,339,313	-		DDA3937_RS14590	0.69	+0.9
3,339,353	+		DDA3937_RS14590	0.76	+0.1
3,339,353	+		DDA3937_RS14590	0.76	+1.4
3,339,394	+		DDA3937_RS14590	0.84	+0.0
3,339,633	+		DDA3937_RS14595	0.10	+2.1
3,339,633	+		DDA3937_RS14595	0.10	+0.1
3,339,635	+		DDA3937_RS14595	0.10	-1.5
3,339,685	+		DDA3937_RS14595	0.21	+0.1
3,339,685	+		DDA3937_RS14595	0.21	-2.2
3,339,685	+		DDA3937_RS14595	0.21	-1.2
3,339,733	-		DDA3937_RS14595	0.31	-0.5
3,339,733	-		DDA3937_RS14595	0.31	-0.7
3,339,801	+		DDA3937_RS14595	0.45	-0.5
3,339,801	+		DDA3937_RS14595	0.45	+0.4
3,339,801	+		DDA3937_RS14595	0.45	-0.2
3,339,872	+		DDA3937_RS14595	0.59	+0.2
3,339,872	+		DDA3937_RS14595	0.59	-0.6
3,339,872	+		DDA3937_RS14595	0.59	-0.8
3,339,872	+		DDA3937_RS14595	0.59	+0.2
3,339,873	-		DDA3937_RS14595	0.59	-1.0
3,339,873	-		DDA3937_RS14595	0.59	-0.3
3,339,909	-		DDA3937_RS14595	0.67	-1.4
3,339,912	+		DDA3937_RS14595	0.67	-0.4
3,339,912	+		DDA3937_RS14595	0.67	-2.0
3,339,912	+		DDA3937_RS14595	0.67	+0.7
3,339,912	+		DDA3937_RS14595	0.67	-1.8
3,339,913	-		DDA3937_RS14595	0.68	-1.3
3,339,913	-		DDA3937_RS14595	0.68	+0.6
3,339,913	-		DDA3937_RS14595	0.68	+0.4
3,339,913	-		DDA3937_RS14595	0.68	-0.1
3,339,938	-		DDA3937_RS14595	0.73	-1.5
3,340,035	-				+0.4
3,340,069	+				-1.3
3,340,069	+				-1.3
3,340,070	-				-1.3
3,340,070	-				-1.0
3,340,073	-				-1.5
3,340,073	-				-0.4
3,340,073	-				+0.3
3,340,073	-				-0.8
3,340,080	+				-0.0
3,340,081	-				-0.5
3,340,083	-				-1.0
3,340,102	+				-0.5
3,340,102	+				+0.2
3,340,103	-				-1.3
3,340,127	+				-1.2
3,340,375	+				+0.5
3,340,375	+				-0.1
3,340,376	-				-0.6
3,340,376	-				-0.0
3,340,376	-				-1.2
3,340,376	-				-0.8
3,340,378	+				-0.8
3,340,379	-				-0.6
3,340,379	-				-0.8
3,340,456	-				-0.5