Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS14380

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,295,407	+				-0.4
3,295,408	-				-1.7
3,295,481	+		DDA3937_RS14370	0.15	-0.5
3,295,482	-		DDA3937_RS14370	0.16	-0.2
3,295,482	-		DDA3937_RS14370	0.16	-0.1
3,295,482	-		DDA3937_RS14370	0.16	-0.9
3,295,533	+		DDA3937_RS14370	0.27	-0.8
3,295,558	+		DDA3937_RS14370	0.32	+0.1
3,295,558	+		DDA3937_RS14370	0.32	-0.1
3,295,558	+		DDA3937_RS14370	0.32	+0.1
3,295,559	-		DDA3937_RS14370	0.32	-2.4
3,295,559	-		DDA3937_RS14370	0.32	-0.5
3,295,561	+		DDA3937_RS14370	0.33	-0.4
3,295,562	-		DDA3937_RS14370	0.33	-0.5
3,295,562	-		DDA3937_RS14370	0.33	-1.3
3,295,719	+		DDA3937_RS14370	0.68	-0.4
3,295,719	+		DDA3937_RS14370	0.68	-0.6
3,295,720	-		DDA3937_RS14370	0.68	-0.5
3,295,804	-		DDA3937_RS14370	0.86	+0.4
3,295,805	+		DDA3937_RS14370	0.86	+0.2
3,295,806	-		DDA3937_RS14370	0.87	-1.1
3,295,806	-		DDA3937_RS14370	0.87	+0.8
3,295,806	-		DDA3937_RS14370	0.87	+1.2
3,295,954	-				-0.9
3,295,974	+				-1.0
3,295,975	-				-0.2
3,296,008	-		DDA3937_RS23280	0.18	-1.5
3,296,193	+				+0.3
3,296,193	+				+1.2
3,296,193	+				-0.5
3,296,193	+				+0.0
3,296,193	+				-1.5
3,296,193	+				+0.4
3,296,193	+				-1.2
3,296,193	+				-1.0
3,296,193	+				-1.8
3,296,194	-				+0.3
3,296,194	-				+0.5
3,296,194	-				+0.4
3,296,275	-				-1.0
3,296,289	-				+1.4
3,296,309	+				-0.5
3,296,309	+				-1.0
3,296,309	+				-0.5
3,296,309	+				+0.5
3,296,310	-				+0.2
3,296,310	-				-0.2
3,296,311	+				+0.5
3,296,311	+				+0.3
3,296,318	+				-0.7
3,296,318	+				-1.0
3,296,319	-				+0.4
3,296,319	-				+0.3
3,296,319	-				-1.2
3,296,323	-				+0.1
3,296,343	-				-0.2
3,296,343	-				-0.4
3,296,343	-				-1.7
3,296,343	-				-0.7
3,296,356	-				-0.6
3,296,356	-				-0.5
3,296,482	-		DDA3937_RS14380	0.13	+0.5
3,296,482	-				+0.5
3,296,548	-		DDA3937_RS14380	0.18	-0.2
3,296,548	-		DDA3937_RS14380	0.18	-2.2
3,296,606	+		DDA3937_RS14380	0.23	-1.2
3,296,607	-		DDA3937_RS14380	0.23	-0.6
3,296,607	-		DDA3937_RS14380	0.23	+0.0
3,296,607	-		DDA3937_RS14380	0.23	-0.8
3,296,813	-				-2.0
3,296,840	-		DDA3937_RS14380	0.42	-0.2
3,296,888	-		DDA3937_RS14380	0.46	-2.5
3,297,191	-		DDA3937_RS14380	0.72	+1.0
3,297,244	+		DDA3937_RS14380	0.76	-1.8
3,297,266	-		DDA3937_RS14380	0.78	-0.2
3,297,532	+				-0.5
3,297,532	+				-0.8
3,297,532	+				+0.0
3,297,532	+				+0.4
3,297,533	-				-0.2
3,297,574	+				+1.0
3,297,575	-				-0.8
3,297,575	-				+1.3
3,297,649	+				-0.5
3,297,650	-				-0.6
3,297,730	-				-1.1
3,297,784	+				+0.4
3,297,784	+				+0.2
3,297,839	+		DDA3937_RS14385	0.10	-0.1
3,297,839	+		DDA3937_RS14385	0.10	-0.0
3,297,839	+		DDA3937_RS14385	0.10	-1.1
3,297,840	-		DDA3937_RS14385	0.10	-1.2
3,297,840	-		DDA3937_RS14385	0.10	-0.2
3,297,840	-				-2.0
3,297,840	-		DDA3937_RS14385	0.10	-0.6
3,298,328	-		DDA3937_RS14385	0.33	-0.8
3,298,418	-		DDA3937_RS14385	0.37	-0.3
3,298,418	-		DDA3937_RS14385	0.37	-1.0