Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13615

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,100,513	-		DDA3937_RS13610	0.80	-0.2
3,100,514	+		DDA3937_RS13610	0.80	+0.2
3,100,515	-		DDA3937_RS13610	0.80	+0.1
3,100,525	-		DDA3937_RS13610	0.81	-0.8
3,100,525	-		DDA3937_RS13610	0.81	-0.5
3,100,526	+		DDA3937_RS13610	0.81	-0.9
3,100,526	+		DDA3937_RS13610	0.81	-0.5
3,100,526	+		DDA3937_RS13610	0.81	+1.0
3,100,526	+		DDA3937_RS13610	0.81	-0.1
3,100,527	-		DDA3937_RS13610	0.81	-0.2
3,100,527	-		DDA3937_RS13610	0.81	+1.1
3,100,527	-		DDA3937_RS13610	0.81	-1.0
3,100,602	+		DDA3937_RS13610	0.87	+0.4
3,100,603	-		DDA3937_RS13610	0.87	-0.5
3,100,649	+				+1.7
3,100,653	+				+0.9
3,100,654	-				-1.3
3,100,713	+				-1.4
3,100,714	-				-0.2
3,100,762	+				-1.4
3,100,804	+				+1.0
3,100,827	-				-1.2
3,100,827	-				+1.0
3,100,933	-				+0.7
3,100,935	+				-0.0
3,101,006	+				-1.2
3,101,007	-				+0.0
3,101,008	+				-0.6
3,101,008	+				+1.8
3,101,009	-				-0.2
3,101,009	-				-2.0
3,101,011	+				-0.5
3,101,012	-				+1.0
3,101,025	-				+0.1
3,101,025	-				+1.5
3,101,025	-				-0.7
3,101,069	+				-0.6
3,101,069	+				+0.4
3,101,070	-				-1.4
3,101,071	+				+0.1
3,101,071	+				+0.8
3,101,072	-				+0.1
3,101,143	+				+0.2
3,101,159	+				+0.3
3,101,159	+				-0.6
3,101,194	+				-0.4
3,101,195	-				+0.4
3,101,226	-				+0.4
3,101,322	+				+0.8
3,101,357	-				-0.9
3,101,382	+				+0.2
3,101,383	-				+0.8
3,101,383	-				-0.0
3,101,383	-				-0.2
3,101,385	-				-0.2
3,101,385	-				+1.4
3,101,415	+				-0.6
3,101,427	+				-0.3
3,101,480	-				-0.4
3,101,496	+				+0.7
3,101,496	+				+0.2
3,101,496	+				+1.2
3,101,500	+		DDA3937_RS13615	0.11	-0.2
3,101,501	-		DDA3937_RS13615	0.12	-1.1
3,101,569	+		DDA3937_RS13615	0.33	+0.1
3,101,569	+		DDA3937_RS13615	0.33	-0.5
3,101,570	-		DDA3937_RS13615	0.34	-1.2
3,101,626	-		DDA3937_RS13615	0.52	+1.1
3,101,626	-		DDA3937_RS13615	0.52	-0.8
3,101,626	-		DDA3937_RS13615	0.52	-0.8
3,101,774	+				-1.2
3,101,774	+				-0.1
3,101,775	-				-0.2
3,101,781	-				+0.8
3,101,787	-				-0.6
3,101,955	-		DDA3937_RS13620	0.39	+0.3
3,102,001	-		DDA3937_RS13620	0.48	-1.5
3,102,065	+		DDA3937_RS13620	0.61	-1.5
3,102,065	+		DDA3937_RS13620	0.61	-0.4
3,102,065	+		DDA3937_RS13620	0.61	+0.1
3,102,065	+		DDA3937_RS13620	0.61	+0.2
3,102,113	+		DDA3937_RS13620	0.71	-1.0
3,102,113	+		DDA3937_RS13620	0.71	+1.5
3,102,113	+		DDA3937_RS13620	0.71	+0.1
3,102,113	+		DDA3937_RS13620	0.71	+0.3
3,102,184	-		DDA3937_RS13620	0.85	-0.7
3,102,200	+		DDA3937_RS13620	0.89	+1.3
3,102,200	+		DDA3937_RS13620	0.89	+1.3
3,102,201	-		DDA3937_RS13620	0.89	-0.4
3,102,201	-		DDA3937_RS13620	0.89	-0.2
3,102,226	-				-0.1
3,102,342	+		DDA3937_RS13625	0.21	-0.1
3,102,342	+		DDA3937_RS13625	0.21	-0.7
3,102,522	+		DDA3937_RS13625	0.61	+0.1
3,102,522	+		DDA3937_RS13625	0.61	-0.5
3,102,523	-		DDA3937_RS13625	0.62	-1.4
3,102,577	+		DDA3937_RS13625	0.74	-0.3
3,102,577	+		DDA3937_RS13625	0.74	-0.3
3,102,578	-		DDA3937_RS13625	0.74	+0.1
3,102,578	-		DDA3937_RS13625	0.74	+1.4
3,102,578	-		DDA3937_RS13625	0.74	+0.1
3,102,698	+				+1.8
3,102,699	-				+0.3