Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11365

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,580,747	+		DDA3937_RS11360	0.45	+0.1
2,580,748	-		DDA3937_RS11360	0.46	-1.4
2,580,748	-		DDA3937_RS11360	0.46	+0.0
2,580,763	-		DDA3937_RS11360	0.47	-0.4
2,580,778	+		DDA3937_RS11360	0.48	-0.3
2,580,883	-		DDA3937_RS11360	0.56	-0.8
2,580,885	+		DDA3937_RS11360	0.56	+0.8
2,580,886	-		DDA3937_RS11360	0.56	+0.1
2,580,886	-		DDA3937_RS11360	0.56	-0.2
2,580,886	-		DDA3937_RS11360	0.56	-0.7
2,580,886	-		DDA3937_RS11360	0.56	-1.4
2,580,912	+		DDA3937_RS11360	0.58	+0.0
2,580,912	+		DDA3937_RS11360	0.58	-2.0
2,580,913	-		DDA3937_RS11360	0.58	-0.1
2,580,913	-		DDA3937_RS11360	0.58	+0.1
2,580,913	-		DDA3937_RS11360	0.58	-1.0
2,580,913	-		DDA3937_RS11360	0.58	+0.0
2,580,933	-		DDA3937_RS11360	0.60	-0.0
2,580,954	+		DDA3937_RS11360	0.61	-0.8
2,580,954	+		DDA3937_RS11360	0.61	-0.0
2,580,954	+		DDA3937_RS11360	0.61	-0.9
2,580,954	+		DDA3937_RS11360	0.61	-2.0
2,580,954	+		DDA3937_RS11360	0.61	+0.6
2,580,955	-		DDA3937_RS11360	0.62	-1.6
2,580,955	-		DDA3937_RS11360	0.62	-1.0
2,580,955	-		DDA3937_RS11360	0.62	+0.9
2,580,955	-		DDA3937_RS11360	0.62	+0.4
2,580,981	+		DDA3937_RS11360	0.64	-0.4
2,580,981	+		DDA3937_RS11360	0.64	+0.0
2,580,982	-		DDA3937_RS11360	0.64	-0.6
2,581,060	+		DDA3937_RS11360	0.70	-0.9
2,581,133	+		DDA3937_RS11360	0.75	-0.4
2,581,133	+		DDA3937_RS11360	0.75	+0.7
2,581,133	+		DDA3937_RS11360	0.75	-0.7
2,581,137	+		DDA3937_RS11360	0.76	+0.6
2,581,137	+		DDA3937_RS11360	0.76	+0.4
2,581,137	+		DDA3937_RS11360	0.76	-0.0
2,581,138	-		DDA3937_RS11360	0.76	-1.4
2,581,312	-		DDA3937_RS11360	0.89	-0.1
2,581,359	+				+0.4
2,581,360	-				-0.4
2,581,360	-				-1.1
2,581,360	-				-0.0
2,581,401	+				+0.3
2,581,460	+				-1.1
2,581,460	+				-0.9
2,581,474	-				-1.8
2,581,608	-				+0.2
2,581,675	-				-0.4
2,581,687	-				-0.9
2,581,916	+		DDA3937_RS11365	0.30	-1.8
2,582,155	-		DDA3937_RS11365	0.64	-0.3
2,582,326	-		DDA3937_RS11365	0.88	-1.9
2,582,326	-		DDA3937_RS11365	0.88	-2.0
2,582,471	-				-0.0
2,582,513	-				-0.1
2,582,621	+				-0.8
2,582,699	+				+0.7
2,582,699	+				-0.6
2,582,715	+				+0.0
2,582,715	+				-0.6
2,582,715	+				+1.4
2,582,804	+		DDA3937_RS11370	0.12	+0.2
2,582,890	+		DDA3937_RS11370	0.21	-1.2
2,582,890	+		DDA3937_RS11370	0.21	+0.1
2,582,890	+		DDA3937_RS11370	0.21	-1.0
2,582,891	-		DDA3937_RS11370	0.21	-0.3
2,582,891	-		DDA3937_RS11370	0.21	-1.6
2,582,944	+		DDA3937_RS11370	0.27	-0.4
2,582,945	-		DDA3937_RS11370	0.27	-1.0
2,582,945	-		DDA3937_RS11370	0.27	+0.4
2,583,008	-		DDA3937_RS11370	0.34	+0.3
2,583,028	+		DDA3937_RS11370	0.36	-1.6
2,583,028	+		DDA3937_RS11370	0.36	-0.1
2,583,028	+		DDA3937_RS11370	0.36	-1.0
2,583,028	+		DDA3937_RS11370	0.36	-0.3
2,583,029	-		DDA3937_RS11370	0.36	+0.3
2,583,029	-		DDA3937_RS11370	0.36	+0.3
2,583,029	-		DDA3937_RS11370	0.36	+0.3
2,583,029	-		DDA3937_RS11370	0.36	+1.2
2,583,029	-		DDA3937_RS11370	0.36	+1.4
2,583,033	+		DDA3937_RS11370	0.36	-0.4
2,583,033	+		DDA3937_RS11370	0.36	+0.1
2,583,034	-		DDA3937_RS11370	0.36	+0.2
2,583,095	+		DDA3937_RS11370	0.43	+0.4
2,583,244	-		DDA3937_RS11370	0.58	-0.8
2,583,244	-		DDA3937_RS11370	0.58	-0.1
2,583,277	+		DDA3937_RS11370	0.61	+0.0
2,583,278	-		DDA3937_RS11370	0.61	+0.4
2,583,370	+		DDA3937_RS11370	0.71	-0.4
2,583,370	+		DDA3937_RS11370	0.71	-0.4