Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11300

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,567,247	+				-0.5
2,567,248	-				-0.5
2,567,330	-				+1.0
2,567,330	-				+0.8
2,567,334	-				+0.2
2,567,406	+		DDA3937_RS11295	0.11	+0.8
2,567,406	+		DDA3937_RS11295	0.11	-0.2
2,567,407	-		DDA3937_RS11295	0.11	+0.3
2,567,407	-		DDA3937_RS11295	0.11	-0.5
2,567,407	-		DDA3937_RS11295	0.11	+2.9
2,567,407	-		DDA3937_RS11295	0.11	+0.9
2,567,407	-		DDA3937_RS11295	0.11	-0.7
2,567,416	-		DDA3937_RS11295	0.13	-0.1
2,567,521	+		DDA3937_RS11295	0.36	-0.1
2,567,521	+		DDA3937_RS11295	0.36	-2.4
2,567,530	-		DDA3937_RS11295	0.38	+0.0
2,567,587	+		DDA3937_RS11295	0.51	+0.0
2,567,599	+				-2.2
2,567,601	+		DDA3937_RS11295	0.54	-1.4
2,567,601	+		DDA3937_RS11295	0.54	+0.4
2,567,602	-		DDA3937_RS11295	0.54	+0.5
2,567,602	-		DDA3937_RS11295	0.54	-0.8
2,567,663	+		DDA3937_RS11295	0.67	+0.5
2,567,667	+		DDA3937_RS11295	0.68	+1.3
2,567,668	-		DDA3937_RS11295	0.68	+0.5
2,567,668	-		DDA3937_RS11295	0.68	-0.2
2,567,668	-		DDA3937_RS11295	0.68	+0.6
2,567,670	-		DDA3937_RS11295	0.69	-0.3
2,567,685	-		DDA3937_RS11295	0.72	+0.3
2,567,693	+		DDA3937_RS11295	0.74	+0.0
2,567,715	-		DDA3937_RS11295	0.78	+1.5
2,567,725	+		DDA3937_RS11295	0.81	-0.0
2,567,746	+		DDA3937_RS11295	0.85	-0.2
2,567,750	+		DDA3937_RS11295	0.86	-0.3
2,567,750	+				+0.5
2,567,751	-		DDA3937_RS11295	0.86	-0.6
2,567,786	-				-0.3
2,567,968	-				+1.1
2,567,969	+				+0.2
2,567,969	+				+0.4
2,567,969	+				+0.1
2,567,970	-				+0.5
2,567,970	-				+1.1
2,567,973	-				+0.5
2,567,973	-				+0.5
2,567,976	+				-0.0
2,567,976	+				+0.2
2,568,000	+				-0.6
2,568,000	+				-1.8
2,568,001	-				+0.9
2,568,067	-				-0.7
2,568,075	-				-1.5
2,568,075	-				-0.5
2,568,075	-				-0.5
2,568,127	+				-0.8
2,568,198	-				-0.3
2,568,198	-				-0.2
2,568,223	-				-0.5
2,568,243	+				-0.0
2,568,243	+				-1.0
2,568,270	+		DDA3937_RS11300	0.12	-0.6
2,568,271	-		DDA3937_RS11300	0.12	-0.5
2,568,288	+				-0.2
2,568,288	+		DDA3937_RS11300	0.15	+1.1
2,568,356	+		DDA3937_RS11300	0.27	+1.0
2,568,379	+		DDA3937_RS11300	0.31	+0.4
2,568,379	+		DDA3937_RS11300	0.31	-1.0
2,568,393	+		DDA3937_RS11300	0.33	-1.1
2,568,393	+		DDA3937_RS11300	0.33	-1.0
2,568,393	+		DDA3937_RS11300	0.33	-0.0
2,568,456	+		DDA3937_RS11300	0.44	-1.2
2,568,457	-		DDA3937_RS11300	0.45	-2.9
2,568,457	-		DDA3937_RS11300	0.45	+2.1
2,568,531	+		DDA3937_RS11300	0.57	+0.5
2,568,531	+		DDA3937_RS11300	0.57	-0.8
2,568,594	-		DDA3937_RS11300	0.68	+0.5
2,568,640	-		DDA3937_RS11300	0.76	-0.5
2,568,640	-		DDA3937_RS11300	0.76	-1.0
2,568,640	-		DDA3937_RS11300	0.76	-1.4
2,568,670	+		DDA3937_RS11300	0.82	-0.9
2,568,671	-		DDA3937_RS11300	0.82	-0.0
2,568,671	-		DDA3937_RS11300	0.82	-0.0
2,568,791	+				-0.5
2,568,928	+		DDA3937_RS11305	0.14	+0.1
2,568,929	-		DDA3937_RS11305	0.14	+0.1
2,569,019	-		DDA3937_RS11305	0.25	-0.5
2,569,046	+		DDA3937_RS11305	0.28	-1.8
2,569,046	+		DDA3937_RS11305	0.28	+1.4
2,569,047	-		DDA3937_RS11305	0.29	-0.2
2,569,059	+		DDA3937_RS11305	0.30	-0.2
2,569,155	-		DDA3937_RS11305	0.42	-1.5
2,569,283	+		DDA3937_RS11305	0.57	-0.5
2,569,331	+		DDA3937_RS11305	0.63	+0.1
2,569,331	+		DDA3937_RS11305	0.63	-0.3
2,569,331	+		DDA3937_RS11305	0.63	+0.2
2,569,332	-		DDA3937_RS11305	0.63	-0.9
2,569,332	-		DDA3937_RS11305	0.63	+1.7
2,569,334	+		DDA3937_RS11305	0.63	-0.1
2,569,334	+		DDA3937_RS11305	0.63	-0.2
2,569,334	+		DDA3937_RS11305	0.63	-0.1
2,569,334	+		DDA3937_RS11305	0.63	+0.3
2,569,335	-		DDA3937_RS11305	0.63	+0.5
2,569,335	-		DDA3937_RS11305	0.63	+1.7
2,569,335	-		DDA3937_RS11305	0.63	+1.1
2,569,428	-				+1.0
2,569,428	-		DDA3937_RS11305	0.75	+0.3
2,569,428	-		DDA3937_RS11305	0.75	-0.7
2,569,501	-		DDA3937_RS11305	0.83	-0.2
2,569,526	+		DDA3937_RS11305	0.86	+0.2
2,569,526	+		DDA3937_RS11305	0.86	-0.8
2,569,639	-				-0.9
2,569,639	-				+0.1