Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS11280

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,563,598	+				+0.1
2,563,933	-				+0.0
2,563,933	-				+0.6
2,563,959	+				+0.3
2,563,960	-				-0.8
2,564,076	+				+0.1
2,564,077	-				-0.1
2,564,077	-				-1.1
2,564,183	-				-1.6
2,564,200	-				+1.1
2,564,200	-				+0.9
2,564,215	-				-0.0
2,564,308	+				-0.5
2,564,309	-				+0.5
2,564,424	+				-0.2
2,564,461	+				-1.4
2,564,461	+				+1.0
2,564,462	-				+0.1
2,564,464	+				-0.0
2,564,464	+				+0.2
2,564,464	+				-0.5
2,564,465	-				+0.4
2,564,465	-				-0.0
2,564,472	+				-0.2
2,564,502	+				-1.0
2,564,502	+				-0.2
2,564,503	-				-0.9
2,564,575	+				+0.1
2,564,575	+				+0.2
2,564,575	+				-0.9
2,564,589	+				-1.0
2,564,589	+				-1.0
2,564,590	-				-1.1
2,564,590	-				-0.0
2,564,590	-				-0.4
2,564,590	-				-1.5
2,564,622	+				-0.7
2,564,622	+				+1.1
2,564,626	+				+0.1
2,564,627	-				+0.5
2,564,656	+				+0.3
2,564,656	+				-0.4
2,564,656	+				+0.9
2,564,657	-				-1.0
2,564,792	-		DDA3937_RS11280	0.23	-1.0
2,564,851	+		DDA3937_RS11280	0.29	+0.1
2,565,127	+		DDA3937_RS11280	0.58	-2.3
2,565,128	-		DDA3937_RS11280	0.58	+1.1
2,565,128	-		DDA3937_RS11280	0.58	+0.1
2,565,128	-		DDA3937_RS11280	0.58	+0.7
2,565,133	-		DDA3937_RS11280	0.59	+0.7
2,565,133	-		DDA3937_RS11280	0.59	-1.3
2,565,133	-		DDA3937_RS11280	0.59	-2.3
2,565,133	-		DDA3937_RS11280	0.59	+1.1
2,565,242	+		DDA3937_RS11280	0.70	-0.5
2,565,257	+		DDA3937_RS11280	0.72	+0.4
2,565,257	+		DDA3937_RS11280	0.72	-1.0
2,565,257	+		DDA3937_RS11280	0.72	-1.0
2,565,258	-		DDA3937_RS11280	0.72	-1.0
2,565,258	-		DDA3937_RS11280	0.72	-0.9
2,565,258	-		DDA3937_RS11280	0.72	+1.0
2,565,274	+		DDA3937_RS11280	0.74	-0.7
2,565,274	+		DDA3937_RS11280	0.74	+0.3
2,565,304	-		DDA3937_RS11280	0.77	-0.5
2,565,304	-		DDA3937_RS11280	0.77	-0.7
2,565,304	-		DDA3937_RS11280	0.77	+0.5
2,565,306	+		DDA3937_RS11280	0.77	+1.1
2,565,307	-		DDA3937_RS11280	0.77	-0.0
2,565,307	-		DDA3937_RS11280	0.77	-0.2
2,565,334	+		DDA3937_RS11280	0.80	-1.0
2,565,334	+		DDA3937_RS11280	0.80	-0.9
2,565,363	-		DDA3937_RS11280	0.83	-0.5
2,565,482	-				+0.5
2,565,490	+				-1.8
2,565,491	-				-0.5
2,565,494	-				-0.6
2,565,551	-				-1.5
2,565,559	+				-0.1
2,565,560	-				+1.1
2,565,574	+				-0.5
2,565,574	+				-0.1
2,565,575	-				+0.3
2,565,591	+				-3.4
2,565,591	+				+1.4
2,565,591	+				+0.3
2,565,591	+				+0.0
2,565,591	+				+0.0
2,565,592	-				+0.1
2,565,592	-				-1.9
2,565,592	-				+0.1
2,565,592	-				-0.7
2,565,626	+				+0.1
2,565,627	-				+1.1
2,565,627	-				-0.2
2,565,627	-				-0.9
2,565,631	-				-1.5
2,565,631	-				-0.1
2,565,660	+				+0.2
2,565,702	+		DDA3937_RS11285	0.13	+0.5
2,565,702	+		DDA3937_RS11285	0.13	-1.0
2,565,702	+		DDA3937_RS11285	0.13	+0.3
2,565,703	-		DDA3937_RS11285	0.14	-0.6
2,565,927	+		DDA3937_RS11285	0.42	-0.6
2,565,928	-		DDA3937_RS11285	0.42	-0.1
2,566,071	+		DDA3937_RS11285	0.60	-0.1
2,566,225	+		DDA3937_RS11285	0.79	-0.7
2,566,225	+		DDA3937_RS11285	0.79	+0.1
2,566,225	+		DDA3937_RS11285	0.79	-0.0
2,566,225	+		DDA3937_RS11285	0.79	-1.2
2,566,226	-		DDA3937_RS11285	0.79	+1.0
2,566,226	-		DDA3937_RS11285	0.79	-0.0
2,566,306	+		DDA3937_RS11285	0.89	-1.0
2,566,306	+		DDA3937_RS11285	0.89	-0.5
2,566,306	+		DDA3937_RS11285	0.89	-2.1
2,566,306	+		DDA3937_RS11285	0.89	-0.5
2,566,306	+		DDA3937_RS11285	0.89	+0.5
2,566,306	+		DDA3937_RS11285	0.89	-0.0
2,566,306	+		DDA3937_RS11285	0.89	+0.3
2,566,307	-		DDA3937_RS11285	0.89	+0.4
2,566,307	-		DDA3937_RS11285	0.89	+0.1
2,566,307	-		DDA3937_RS11285	0.89	-0.1
2,566,307	-		DDA3937_RS11285	0.89	+0.3
2,566,307	-		DDA3937_RS11285	0.89	+0.5
2,566,327	+				-1.2
2,566,327	+				-0.6
2,566,327	+				-0.8
2,566,328	-				-1.0
2,566,390	+				-0.3
2,566,415	+				-1.3
2,566,466	+				+0.5
2,566,466	+				+1.5