Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10315

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,324,482	+		DDA3937_RS10310	0.27	-2.2
2,324,483	-		DDA3937_RS10310	0.27	+0.4
2,324,569	+		DDA3937_RS10310	0.37	+0.6
2,324,570	-				-1.0
2,324,671	-		DDA3937_RS10310	0.50	-1.2
2,324,887	-		DDA3937_RS10310	0.77	-1.4
2,324,908	-		DDA3937_RS10310	0.79	-1.1
2,324,908	-		DDA3937_RS10310	0.79	-1.1
2,324,908	-		DDA3937_RS10310	0.79	-0.5
2,324,919	+		DDA3937_RS10310	0.81	+0.0
2,324,953	+		DDA3937_RS10310	0.85	-1.0
2,324,953	+		DDA3937_RS10310	0.85	-0.5
2,324,953	+		DDA3937_RS10310	0.85	-1.6
2,324,953	+		DDA3937_RS10310	0.85	-0.2
2,324,953	+		DDA3937_RS10310	0.85	-1.2
2,324,954	-		DDA3937_RS10310	0.85	-0.0
2,324,954	-		DDA3937_RS10310	0.85	-1.2
2,324,954	-		DDA3937_RS10310	0.85	-0.9
2,325,053	-				-0.4
2,325,111	-				+1.4
2,325,164	+				+0.1
2,325,164	+				-0.3
2,325,164	+				+1.2
2,325,165	-				-0.3
2,325,209	+				-1.2
2,325,210	-				-1.1
2,325,272	-				+0.6
2,325,284	+				-0.9
2,325,289	+				+0.2
2,325,289	+				+0.8
2,325,290	-				-0.9
2,325,377	+				+1.9
2,325,377	+				+0.1
2,325,412	+				-1.8
2,325,412	+				+0.3
2,325,412	+				-1.0
2,325,413	-				-0.8
2,325,428	+				-0.0
2,325,429	-				-1.0
2,325,431	-				-0.0
2,325,434	+				-0.4
2,325,434	+				-1.0
2,325,446	-				+0.6
2,325,448	+				-1.0
2,325,460	+				-0.8
2,325,493	+		DDA3937_RS10315	0.12	-2.0
2,325,493	+		DDA3937_RS10315	0.12	+0.1
2,325,575	+		DDA3937_RS10315	0.25	-1.6
2,325,605	+		DDA3937_RS10315	0.30	-1.0
2,325,606	-		DDA3937_RS10315	0.30	-0.6
2,325,607	+		DDA3937_RS10315	0.30	+1.0
2,325,608	-		DDA3937_RS10315	0.30	-1.0
2,325,787	+		DDA3937_RS10315	0.59	-0.1
2,326,013	+				+1.6
2,326,014	-				-0.8
2,326,014	-				-0.4
2,326,016	-				-0.4
2,326,037	+				+0.3
2,326,037	+				-1.4
2,326,062	+				+0.8
2,326,062	+				+0.8
2,326,062	+				+2.0
2,326,063	-				+2.0
2,326,063	-				+0.1
2,326,063	-				-0.3
2,326,063	-				-0.3
2,326,064	+				-0.9
2,326,064	+				-0.4
2,326,065	-				-1.5
2,326,071	-				-1.6
2,326,071	-				+0.8
2,326,080	+				-0.4
2,326,080	+				-0.8
2,326,081	-				-1.6
2,326,204	-				+0.2
2,326,204	-				+0.1
2,326,204	-				+0.1
2,326,204	-				-1.1
2,326,204	-				+0.2
2,326,204	-				-0.8
2,326,411	+				+0.6
2,326,425	+				-1.4
2,326,426	-				+1.1
2,326,426	-				-0.6
2,326,426	-				+0.7
2,326,431	+				-0.7
2,326,507	+				-1.4
2,326,507	+				-0.7
2,326,508	-				+0.8
2,326,508	-				+0.9
2,326,515	-				-0.6
2,326,580	+		DDA3937_RS10325	0.15	+0.2
2,326,581	-		DDA3937_RS10325	0.15	+0.6
2,326,581	-		DDA3937_RS10325	0.15	-0.0
2,326,581	-		DDA3937_RS10325	0.15	+1.4
2,326,581	-		DDA3937_RS10325	0.15	+0.0
2,326,581	-		DDA3937_RS10325	0.15	-2.2
2,326,581	-		DDA3937_RS10325	0.15	-1.6
2,326,581	-		DDA3937_RS10325	0.15	+0.6
2,326,581	-		DDA3937_RS10325	0.15	+1.1
2,326,581	-		DDA3937_RS10325	0.15	+0.2
2,326,584	+		DDA3937_RS10325	0.15	+0.6
2,326,584	+		DDA3937_RS10325	0.15	+0.1
2,326,585	-		DDA3937_RS10325	0.15	-0.2
2,326,646	+		DDA3937_RS10325	0.22	+0.4
2,326,646	+		DDA3937_RS10325	0.22	-0.9
2,326,647	-		DDA3937_RS10325	0.22	-0.2
2,326,686	-		DDA3937_RS10325	0.27	+0.1
2,326,686	-		DDA3937_RS10325	0.27	+0.2
2,326,747	-		DDA3937_RS10325	0.34	+1.0
2,326,747	-		DDA3937_RS10325	0.34	-1.0
2,326,761	-		DDA3937_RS10325	0.36	-0.0
2,326,796	+		DDA3937_RS10325	0.40	+0.2
2,326,796	+		DDA3937_RS10325	0.40	-0.6
2,326,797	-		DDA3937_RS10325	0.40	+2.1
2,326,797	-		DDA3937_RS10325	0.40	+1.0
2,326,814	+		DDA3937_RS10325	0.42	+0.2
2,326,815	-				+0.6
2,326,815	-		DDA3937_RS10325	0.42	+0.1
2,326,815	-		DDA3937_RS10325	0.42	-0.2
2,326,815	-		DDA3937_RS10325	0.42	-0.8
2,326,815	-		DDA3937_RS10325	0.42	+0.0
2,326,815	-		DDA3937_RS10325	0.42	-0.7
2,326,824	+		DDA3937_RS10325	0.43	-0.2
2,326,824	+		DDA3937_RS10325	0.43	+0.6
2,326,825	-		DDA3937_RS10325	0.43	-1.4
2,326,827	-		DDA3937_RS10325	0.44	+0.4
2,326,918	+		DDA3937_RS10325	0.54	-0.4