Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06990

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,567,226	+				-1.3
1,567,294	+				+1.2
1,567,295	-				+0.2
1,567,417	-				-0.8
1,567,442	+				+0.8
1,567,654	-		DDA3937_RS22035	0.42	+0.0
1,567,669	+		DDA3937_RS22035	0.46	-1.3
1,567,694	-		DDA3937_RS22035	0.52	-2.0
1,567,724	+		DDA3937_RS22035	0.59	-2.3
1,567,829	-		DDA3937_RS22035	0.84	-0.5
1,567,848	+		DDA3937_RS22035	0.88	-1.8
1,567,876	+				-1.5
1,567,891	+				+0.8
1,568,034	-		DDA3937_RS06985	0.41	-0.6
1,568,034	-		DDA3937_RS06985	0.41	+0.0
1,568,174	-				+0.2
1,568,203	-				+1.6
1,569,150	+		DDA3937_RS06990	0.70	+0.3
1,569,150	+		DDA3937_RS06990	0.70	+0.2
1,569,233	+		DDA3937_RS06990	0.76	+0.8
1,569,234	-				-3.1
1,569,320	+		DDA3937_RS06990	0.82	+1.5
1,569,320	+		DDA3937_RS06990	0.82	+0.8
1,569,328	+		DDA3937_RS06990	0.83	-0.4
1,569,374	+		DDA3937_RS06990	0.86	+0.1
1,569,381	-		DDA3937_RS06990	0.87	-1.2
1,569,460	-				-0.9
1,569,571	-				-0.4
1,569,656	+		DDA3937_RS22040	0.21	-0.4
1,569,699	-		DDA3937_RS22040	0.32	-2.3
1,569,742	-		DDA3937_RS22040	0.43	+0.5
1,569,765	+		DDA3937_RS22040	0.49	-1.4
1,569,899	+		DDA3937_RS22040	0.85	-2.0
1,569,912	+		DDA3937_RS22040	0.88	-0.3
1,569,918	+		DDA3937_RS22040	0.90	-2.2
1,569,941	+				+0.0
1,569,942	-				+0.5
1,569,943	+				-0.6
1,570,028	+				+0.5
1,570,251	-		DDA3937_RS06995	0.19	-0.5
1,570,397	+		DDA3937_RS06995	0.33	-3.2
1,570,397	+		DDA3937_RS06995	0.33	+0.9
1,570,397	+		DDA3937_RS06995	0.33	+0.4
1,570,397	+		DDA3937_RS06995	0.33	-0.1
1,570,397	+		DDA3937_RS06995	0.33	+0.5
1,570,397	+		DDA3937_RS06995	0.33	-0.6
1,570,397	+		DDA3937_RS06995	0.33	-0.8
1,570,400	-		DDA3937_RS06995	0.33	-0.8
1,570,502	-		DDA3937_RS06995	0.43	-0.4
1,570,502	-		DDA3937_RS06995	0.43	-0.1
1,570,502	-		DDA3937_RS06995	0.43	-0.5
1,570,527	-				-0.2
1,570,556	+		DDA3937_RS06995	0.48	+0.8
1,570,557	-		DDA3937_RS06995	0.49	+1.4
1,570,557	-		DDA3937_RS06995	0.49	-1.1