Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06975

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,560,600	+				-0.0
1,560,601	-				-0.5
1,560,619	-				+1.6
1,560,679	+				-1.0
1,560,679	+				-0.6
1,560,680	-				+0.6
1,561,000	+		DDA3937_RS06970	0.39	+0.0
1,561,000	+		DDA3937_RS06970	0.39	-2.3
1,561,001	-		DDA3937_RS06970	0.39	-0.4
1,561,001	-		DDA3937_RS06970	0.39	+0.4
1,561,001	-		DDA3937_RS06970	0.39	+0.6
1,561,004	+		DDA3937_RS06970	0.39	-0.1
1,561,084	+		DDA3937_RS06970	0.48	+0.2
1,561,084	+		DDA3937_RS06970	0.48	+0.7
1,561,127	-		DDA3937_RS06970	0.52	-0.8
1,561,127	-		DDA3937_RS06970	0.52	-0.3
1,561,186	+		DDA3937_RS06970	0.58	+0.2
1,561,186	+		DDA3937_RS06970	0.58	+0.2
1,561,195	-		DDA3937_RS06970	0.59	+0.3
1,561,216	+		DDA3937_RS06970	0.61	+0.0
1,561,217	-		DDA3937_RS06970	0.61	-0.3
1,561,271	-		DDA3937_RS06970	0.67	+0.1
1,561,338	+		DDA3937_RS06970	0.74	-0.2
1,561,338	+		DDA3937_RS06970	0.74	+0.2
1,561,338	+		DDA3937_RS06970	0.74	-0.5
1,561,338	+		DDA3937_RS06970	0.74	-0.2
1,561,338	+		DDA3937_RS06970	0.74	+0.3
1,561,339	-		DDA3937_RS06970	0.74	-0.2
1,561,339	-		DDA3937_RS06970	0.74	+0.2
1,561,339	-		DDA3937_RS06970	0.74	-0.8
1,561,339	-		DDA3937_RS06970	0.74	-0.2
1,561,426	+		DDA3937_RS06970	0.83	-1.2
1,561,426	+		DDA3937_RS06970	0.83	+1.1
1,561,427	-		DDA3937_RS06970	0.83	-0.1
1,561,427	-		DDA3937_RS06970	0.83	+1.2
1,561,443	+		DDA3937_RS06970	0.85	+1.3
1,561,444	-		DDA3937_RS06970	0.85	-0.6
1,561,481	+		DDA3937_RS06970	0.89	+0.3
1,561,481	+		DDA3937_RS06970	0.89	-1.8
1,561,492	-		DDA3937_RS06970	0.90	+0.1
1,561,531	+				+1.1
1,561,532	-				-0.2
1,561,581	+				-0.8
1,561,753	-		DDA3937_RS06975	0.18	+0.2
1,561,794	+		DDA3937_RS06975	0.23	-0.5
1,561,795	-		DDA3937_RS06975	0.23	+0.1
1,561,795	-		DDA3937_RS06975	0.23	+1.2
1,561,799	+		DDA3937_RS06975	0.23	+0.8
1,561,799	+				-1.8
1,561,799	+		DDA3937_RS06975	0.23	+0.0
1,561,799	+		DDA3937_RS06975	0.23	+0.1
1,561,800	-		DDA3937_RS06975	0.23	-0.8
1,561,800	-		DDA3937_RS06975	0.23	-1.5
1,561,873	+		DDA3937_RS06975	0.31	+0.6
1,561,873	+		DDA3937_RS06975	0.31	-1.1
1,561,874	-		DDA3937_RS06975	0.31	+0.2
1,561,899	+		DDA3937_RS06975	0.34	-0.3
1,561,899	+		DDA3937_RS06975	0.34	-1.4
1,561,930	+		DDA3937_RS06975	0.37	+0.0
1,561,930	+		DDA3937_RS06975	0.37	-0.4
1,561,931	-		DDA3937_RS06975	0.37	-0.5
1,562,023	+		DDA3937_RS06975	0.47	+0.0
1,562,058	+		DDA3937_RS06975	0.51	-0.3
1,562,058	+		DDA3937_RS06975	0.51	-0.9
1,562,072	+		DDA3937_RS06975	0.53	+0.3
1,562,226	+		DDA3937_RS06975	0.70	-0.2
1,562,226	+		DDA3937_RS06975	0.70	-0.4
1,562,226	+		DDA3937_RS06975	0.70	+0.1
1,562,226	+		DDA3937_RS06975	0.70	-1.5
1,562,226	+		DDA3937_RS06975	0.70	-0.2
1,562,226	+		DDA3937_RS06975	0.70	+0.3
1,562,227	-		DDA3937_RS06975	0.70	+0.1
1,562,227	-		DDA3937_RS06975	0.70	+0.3
1,562,333	+				-1.0
1,562,333	+		DDA3937_RS06975	0.81	-0.7
1,562,334	-		DDA3937_RS06975	0.81	+0.6
1,562,359	-		DDA3937_RS06975	0.84	+1.2
1,562,436	+				-1.2
1,562,436	+				+0.3
1,562,436	+				+0.5
1,562,436	+				+0.2
1,562,437	-				-0.9
1,562,469	+				-0.2
1,562,469	+				+0.1
1,562,469	+				+0.1
1,562,469	+				-0.9
1,562,469	+				+0.8
1,562,469	+				-1.2
1,562,470	-				-0.1
1,562,470	-				+0.4
1,562,470	-				+0.2
1,562,470	-				+0.1
1,562,471	+				+0.8
1,562,471	+				-0.5
1,562,472	-				-3.0
1,562,472	-				+0.0
1,562,472	-				+1.8
1,562,472	-				-0.5
1,562,644	+				+0.8
1,562,650	+				-1.2
1,562,650	+				-0.8
1,562,650	+				+0.3
1,562,650	+				-0.9
1,562,650	+				-0.9
1,562,651	-				+0.9
1,562,651	-				-0.3
1,562,651	-				-0.3
1,562,651	-				+0.0
1,562,651	-				-1.3
1,562,651	-				-0.0
1,562,697	+				-0.2
1,562,698	-				-1.5
1,562,840	+				+2.8
1,562,840	+				-0.2
1,562,841	-				-0.1
1,562,843	+				+0.4
1,562,844	-				-1.5
1,562,861	-				-0.2
1,562,881	+				+0.6
1,562,926	+				-0.6
1,562,926	+				+0.4
1,562,927	-				-0.6
1,562,927	-				+0.2
1,562,983	-				+0.1
1,562,983	-				-1.4
1,563,013	+		DDA3937_RS06980	0.11	-0.2
1,563,014	-		DDA3937_RS06980	0.11	+0.7
1,563,014	-		DDA3937_RS06980	0.11	-0.6
1,563,066	-		DDA3937_RS06980	0.12	-0.4
1,563,093	+		DDA3937_RS06980	0.12	+1.3
1,563,093	+		DDA3937_RS06980	0.12	+0.6
1,563,094	-		DDA3937_RS06980	0.12	-0.2
1,563,484	-		DDA3937_RS06980	0.21	-1.2
1,563,484	-		DDA3937_RS06980	0.21	-0.3
1,563,491	+		DDA3937_RS06980	0.21	+1.1
1,563,491	+		DDA3937_RS06980	0.21	+0.7