Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS06740

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,506,321	-				-0.4
1,506,321	-				-0.8
1,506,514	+		DDA3937_RS06735	0.28	-1.8
1,506,514	+		DDA3937_RS06735	0.28	-2.1
1,506,527	+		DDA3937_RS06735	0.29	-0.2
1,506,528	-		DDA3937_RS06735	0.29	-0.9
1,506,528	-		DDA3937_RS06735	0.29	-0.9
1,506,554	+		DDA3937_RS06735	0.32	-0.7
1,506,604	+		DDA3937_RS06735	0.37	-1.2
1,506,604	+		DDA3937_RS06735	0.37	-2.5
1,506,604	+		DDA3937_RS06735	0.37	-1.9
1,506,604	+		DDA3937_RS06735	0.37	-0.5
1,506,605	-		DDA3937_RS06735	0.37	-1.3
1,506,743	+		DDA3937_RS06735	0.50	-0.7
1,506,743	+		DDA3937_RS06735	0.50	-0.7
1,506,744	-		DDA3937_RS06735	0.50	-1.3
1,506,744	-		DDA3937_RS06735	0.50	-0.4
1,506,782	+		DDA3937_RS06735	0.53	-2.5
1,506,782	+		DDA3937_RS06735	0.53	-2.3
1,506,782	+		DDA3937_RS06735	0.53	-0.3
1,506,782	+		DDA3937_RS06735	0.53	-2.7
1,506,782	+		DDA3937_RS06735	0.53	-1.3
1,506,893	+		DDA3937_RS06735	0.64	-2.3
1,506,893	+		DDA3937_RS06735	0.64	+0.7
1,506,894	-		DDA3937_RS06735	0.64	-0.9
1,506,894	-		DDA3937_RS06735	0.64	-1.1
1,506,894	-		DDA3937_RS06735	0.64	-2.3
1,506,894	-		DDA3937_RS06735	0.64	-1.3
1,506,894	-		DDA3937_RS06735	0.64	-1.8
1,506,920	+		DDA3937_RS06735	0.66	+0.0
1,506,956	+		DDA3937_RS06735	0.70	+0.9
1,507,061	+		DDA3937_RS06735	0.79	-1.2
1,507,202	+				-0.8
1,507,202	+				-1.4
1,507,203	-				+0.2
1,507,203	-				-1.9
1,507,235	-				+0.9
1,507,247	+				+0.3
1,507,247	+				-0.2
1,507,247	+				+0.5
1,507,283	+				-0.2
1,507,318	+				-0.6
1,507,318	+				-0.1
1,507,319	-				-1.3
1,507,348	-				+1.5
1,507,385	+				+0.1
1,507,385	+				+0.3
1,507,386	-				-2.6
1,507,389	+				+0.3
1,507,389	+				-1.1
1,507,407	+		DDA3937_RS06740	0.12	+0.2
1,507,407	+		DDA3937_RS06740	0.12	-0.1
1,507,407	+		DDA3937_RS06740	0.12	-1.4
1,507,407	+		DDA3937_RS06740	0.12	-0.7
1,507,407	+		DDA3937_RS06740	0.12	-0.9
1,507,407	+		DDA3937_RS06740	0.12	+0.5
1,507,407	+		DDA3937_RS06740	0.12	+0.8
1,507,407	+		DDA3937_RS06740	0.12	-0.4
1,507,408	-		DDA3937_RS06740	0.12	-0.2
1,507,408	-		DDA3937_RS06740	0.12	-2.1
1,507,408	-		DDA3937_RS06740	0.12	-3.6
1,507,592	+		DDA3937_RS06740	0.33	-0.1
1,507,592	+		DDA3937_RS06740	0.33	-0.5
1,507,791	-		DDA3937_RS06740	0.56	-0.7
1,507,791	-		DDA3937_RS06740	0.56	-0.7
1,507,824	+		DDA3937_RS06740	0.60	-1.5
1,507,824	+		DDA3937_RS06740	0.60	-2.0
1,507,825	-		DDA3937_RS06740	0.60	-0.1
1,507,914	+		DDA3937_RS06740	0.70	-0.8
1,507,914	+		DDA3937_RS06740	0.70	-1.3
1,507,914	+		DDA3937_RS06740	0.70	-3.0
1,507,914	+		DDA3937_RS06740	0.70	-0.2
1,507,914	+		DDA3937_RS06740	0.70	+0.4
1,507,915	-		DDA3937_RS06740	0.70	+0.0
1,507,915	-		DDA3937_RS06740	0.70	-1.8
1,507,915	-		DDA3937_RS06740	0.70	-1.5
1,507,915	-		DDA3937_RS06740	0.70	-0.5
1,508,119	-				-0.2
1,508,158	+				+0.3
1,508,158	+				+1.5
1,508,158	+				+0.6
1,508,158	+				+0.1
1,508,175	+				+0.0
1,508,176	-				+1.0
1,508,176	-				-1.5
1,508,176	-				-0.5
1,508,370	+		DDA3937_RS06745	0.36	+0.1
1,508,371	-		DDA3937_RS06745	0.36	-0.1
1,508,456	-		DDA3937_RS06745	0.52	-0.5
1,508,566	+		DDA3937_RS06745	0.73	+0.3
1,508,566	+		DDA3937_RS06745	0.73	+0.5
1,508,567	-		DDA3937_RS06745	0.73	+0.9
1,508,581	+		DDA3937_RS06745	0.75	-0.2
1,508,582	-		DDA3937_RS06745	0.76	+1.5
1,508,585	-		DDA3937_RS06745	0.76	-0.7
1,508,585	-		DDA3937_RS06745	0.76	+0.0
1,508,677	-				+2.1
1,508,702	+				+0.5
1,508,702	+				-0.6
1,508,703	-				+1.2
1,508,703	-				-0.9
1,508,786	-				-0.2
1,508,816	+		DDA3937_RS06750	0.12	+0.5
1,508,816	+				-1.5
1,508,817	-		DDA3937_RS06750	0.12	+0.0
1,508,817	-		DDA3937_RS06750	0.12	-0.1
1,508,819	+		DDA3937_RS06750	0.13	-0.5
1,508,853	+		DDA3937_RS06750	0.17	+0.1
1,508,886	+		DDA3937_RS06750	0.20	+0.1
1,509,012	+		DDA3937_RS06750	0.35	+0.2
1,509,013	-		DDA3937_RS06750	0.35	+1.5
1,509,016	+		DDA3937_RS06750	0.36	+0.2
1,509,016	+		DDA3937_RS06750	0.36	+0.8
1,509,016	+				-0.7
1,509,042	+		DDA3937_RS06750	0.39	+1.5
1,509,043	-		DDA3937_RS06750	0.39	-0.5
1,509,043	-		DDA3937_RS06750	0.39	-0.3
1,509,076	+		DDA3937_RS06750	0.42	-1.6
1,509,076	+		DDA3937_RS06750	0.42	-0.4
1,509,076	+		DDA3937_RS06750	0.42	-0.7
1,509,077	-		DDA3937_RS06750	0.43	-0.9
1,509,077	-		DDA3937_RS06750	0.43	+0.4
1,509,077	-		DDA3937_RS06750	0.43	+0.6
1,509,078	+		DDA3937_RS06750	0.43	-0.5
1,509,137	+		DDA3937_RS06750	0.50	-0.1
1,509,168	+		DDA3937_RS06750	0.53	-0.9
1,509,169	-		DDA3937_RS06750	0.53	+0.1
1,509,174	-		DDA3937_RS06750	0.54	+0.6