Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS05790

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,293,486	-				-0.9
1,293,517	+				-2.4
1,293,518	-				-2.4
1,294,008	+		DDA3937_RS05790	0.25	-0.9
1,294,008	+		DDA3937_RS05790	0.25	+0.2
1,294,008	+		DDA3937_RS05790	0.25	-0.4
1,294,008	+		DDA3937_RS05790	0.25	-1.6
1,294,009	-		DDA3937_RS05790	0.25	-1.8
1,294,059	+		DDA3937_RS05790	0.33	-1.6
1,294,060	-		DDA3937_RS05790	0.33	+0.0
1,294,068	+		DDA3937_RS05790	0.34	-0.6
1,294,171	+				+1.0
1,294,172	-		DDA3937_RS05790	0.52	-1.6
1,294,324	+		DDA3937_RS05790	0.77	+2.0
1,294,324	+		DDA3937_RS05790	0.77	-1.7
1,294,324	+		DDA3937_RS05790	0.77	-0.6
1,294,325	-		DDA3937_RS05790	0.77	-0.5
1,294,325	-		DDA3937_RS05790	0.77	-0.2
1,294,325	-		DDA3937_RS05790	0.77	+2.0
1,294,325	-		DDA3937_RS05790	0.77	-0.5
1,294,567	-				+1.1
1,294,607	+				+0.7
1,294,607	+				+1.2
1,294,611	+				+0.0
1,294,611	+				+0.2
1,294,611	+				-0.8
1,294,611	+				-1.0
1,294,612	-				+0.1
1,294,612	-				-0.4
1,294,615	+				-1.0
1,294,615	+				-1.0
1,294,615	+				+0.4
1,294,627	+				-0.6
1,294,627	+				-0.8
1,294,627	+				-0.9
1,294,627	+				+1.3
1,294,627	+				-0.5
1,294,627	+				-0.2
1,294,627	+				-0.5
1,294,627	+				+0.4
1,294,628	-				-0.0
1,294,630	+				-1.4
1,294,631	-				-0.6
1,294,638	-				+0.0
1,294,638	-				+2.8
1,294,807	-				+0.6
1,294,922	+		DDA3937_RS05795	0.15	-1.2
1,295,031	-		DDA3937_RS05795	0.21	+0.4
1,295,121	+		DDA3937_RS05795	0.26	+0.1
1,295,121	+				+0.5
1,295,367	-		DDA3937_RS05795	0.39	-1.5
1,295,394	+		DDA3937_RS05795	0.40	-1.8
1,295,395	-		DDA3937_RS05795	0.40	+0.5
1,295,395	-		DDA3937_RS05795	0.40	-0.0
1,295,395	-		DDA3937_RS05795	0.40	+1.0
1,295,395	-		DDA3937_RS05795	0.40	-1.0
1,295,397	-		DDA3937_RS05795	0.40	+0.4
1,295,397	-		DDA3937_RS05795	0.40	-0.9